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DESCRIPTION
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DESCRIPTION
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Package: ubiquity
Type: Package
Title: PKPD, PBPK, and Systems Pharmacology Modeling Tools
Version: 2.0.1
Authors@R: c(person("John", "Harrold",
role = c("aut", "cre"),
email = "john.m.harrold@gmail.com",
comment = c(ORCID="0000-0003-2052-4373")))
Maintainer: John Harrold <john.m.harrold@gmail.com>
Description: Complete work flow for the analysis of pharmacokinetic pharmacodynamic (PKPD), physiologically-based pharmacokinetic (PBPK) and systems pharmacology models including: creation of ordinary differential equation-based models, pooled parameter estimation, individual/population based simulations, rule-based simulations for clinical trial design and modeling assays, deployment with a customizable 'Shiny' app, and non-compartmental analysis. System-specific analysis templates can be generated and each element includes integrated reporting with 'PowerPoint' and 'Word'.
URL: https://ubiquity.tools/rworkflow
SystemRequirements: Perl
BugReports: https://github.com/john-harrold/ubiquity/issues
License: BSD_2_clause + file LICENSE
Encoding: UTF-8
LazyData: FALSE
Imports:
cli,
deSolve,
dplyr (>= 1.0.0),
digest,
doParallel,
flextable,
foreach,
ggplot2,
knitr,
magrittr,
MASS,
onbrand (>= 1.0.2),
optimx,
PKNCA,
pso,
readxl,
rmarkdown,
rhandsontable,
scales,
stats,
stringr,
shiny,
Suggests:
GA,
GGally,
gridGraphics,
gridExtra,
grid,
officer,
webshot,
ggrepel,
rstudioapi,
testthat
VignetteBuilder: knitr
RoxygenNote: 7.1.2