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NAMESPACE
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# Generated by roxygen2: do not edit by hand
S3method(plot,Map)
S3method(plot,foldchange_matrix)
S3method(plot,missingness_map)
S3method(plot,outlier_map)
S3method(plotConcord,data.frame)
S3method(plotConcord,default)
S3method(plotConcord,numeric)
S3method(plotVolcanoHTML,data.frame)
S3method(plotVolcanoHTML,default)
S3method(plotVolcanoHTML,stat_table)
S3method(print,foldchange_matrix)
S3method(print,missingness_map)
S3method(print,outlier_map)
export(addCDFquantiles)
export(addPolygon)
export(boxplotBeeswarm)
export(boxplotGrouped)
export(boxplotSubarray)
export(calcFoldchangeMatrix)
export(calcMissingnessMap)
export(calcOutlierMap)
export(close_figure)
export(figure)
export(getFlaggedIds)
export(palette_soma)
export(palette_soma_gender)
export(palette_soma_greys)
export(palette_soma_risk)
export(plotCDF)
export(plotCDFbyGroup)
export(plotCDFlist)
export(plotConcord)
export(plotDoubleHist)
export(plotLongitudinal)
export(plotPDF)
export(plotPDFbyGroup)
export(plotPDFlist)
export(plotPolygon)
export(plotVolcano)
export(plotVolcanoHTML)
export(scale_color_soma)
export(scale_color_soma_gender)
export(scale_color_soma_greys)
export(scale_color_soma_risk)
export(scale_continuous_color_soma)
export(scale_continuous_color_soma_risk)
export(scale_continuous_fill_soma)
export(scale_continuous_fill_soma_risk)
export(scale_fill_soma)
export(scale_fill_soma_gender)
export(scale_fill_soma_greys)
export(scale_fill_soma_risk)
export(theme_soma)
importFrom(SomaDataIO,col2rn)
importFrom(SomaDataIO,getAnalyteInfo)
importFrom(SomaDataIO,getAnalytes)
importFrom(SomaDataIO,getMeta)
importFrom(SomaDataIO,is.apt)
importFrom(SomaDataIO,rm_rn)
importFrom(SomaDataIO,rn2col)
importFrom(dplyr,all_of)
importFrom(dplyr,arrange)
importFrom(dplyr,case_when)
importFrom(dplyr,everything)
importFrom(dplyr,filter)
importFrom(dplyr,group_by)
importFrom(dplyr,left_join)
importFrom(dplyr,mutate)
importFrom(dplyr,pull)
importFrom(dplyr,recode)
importFrom(dplyr,row_number)
importFrom(dplyr,select)
importFrom(dplyr,ungroup)
importFrom(ggplot2,aes)
importFrom(ggplot2,after_stat)
importFrom(ggplot2,annotate)
importFrom(ggplot2,coord_cartesian)
importFrom(ggplot2,discrete_scale)
importFrom(ggplot2,element_blank)
importFrom(ggplot2,element_line)
importFrom(ggplot2,element_rect)
importFrom(ggplot2,element_text)
importFrom(ggplot2,expand_limits)
importFrom(ggplot2,facet_wrap)
importFrom(ggplot2,geom_abline)
importFrom(ggplot2,geom_boxplot)
importFrom(ggplot2,geom_density)
importFrom(ggplot2,geom_histogram)
importFrom(ggplot2,geom_hline)
importFrom(ggplot2,geom_jitter)
importFrom(ggplot2,geom_line)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_raster)
importFrom(ggplot2,geom_rug)
importFrom(ggplot2,geom_smooth)
importFrom(ggplot2,geom_step)
importFrom(ggplot2,geom_text)
importFrom(ggplot2,geom_vline)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,ggsave)
importFrom(ggplot2,ggtitle)
importFrom(ggplot2,guide_axis)
importFrom(ggplot2,guide_colorbar)
importFrom(ggplot2,guide_legend)
importFrom(ggplot2,guides)
importFrom(ggplot2,labs)
importFrom(ggplot2,position_jitter)
importFrom(ggplot2,position_jitterdodge)
importFrom(ggplot2,rel)
importFrom(ggplot2,scale_color_gradient)
importFrom(ggplot2,scale_color_manual)
importFrom(ggplot2,scale_fill_gradient)
importFrom(ggplot2,scale_fill_gradientn)
importFrom(ggplot2,scale_fill_manual)
importFrom(ggplot2,scale_x_continuous)
importFrom(ggplot2,scale_x_discrete)
importFrom(ggplot2,scale_y_reverse)
importFrom(ggplot2,sec_axis)
importFrom(ggplot2,stat_ecdf)
importFrom(ggplot2,stat_function)
importFrom(ggplot2,stat_summary)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_bw)
importFrom(ggplot2,unit)
importFrom(ggplot2,xlab)
importFrom(ggplot2,ylab)
importFrom(grDevices,jpeg)
importFrom(grDevices,pdf)
importFrom(grDevices,png)
importFrom(grDevices,postscript)
importFrom(graphics,plot)
importFrom(rlang,"!!!")
importFrom(rlang,"!!")
importFrom(rlang,":=")
importFrom(rlang,enquo)
importFrom(rlang,quo_name)
importFrom(rlang,sym)
importFrom(stats,coef)
importFrom(stats,cor.test)
importFrom(stats,dist)
importFrom(stats,dnorm)
importFrom(stats,mad)
importFrom(stats,median)
importFrom(stats,pnorm)
importFrom(stats,quantile)
importFrom(stats,setNames)
importFrom(tidyr,drop_na)
importFrom(tidyr,gather)
importFrom(tidyr,pivot_longer)
importFrom(utils,head)