3093-pipeline-patch.json

[
    {
        "@id": "/pipelines/ENCPL521QAX/",
        "alternate_accessions" : ["ENCPL611KAU"]
    },
    {
        "@id": "/pipelines/ENCPL002LSE/",
        "alternate_accessions" : ["ENCPL739VZK"],
        "analysis_steps": [
            "/analysis-steps/index-rsem-v-1-0/",
            "/analysis-steps/index-star-v-1-0/",
            "/analysis-steps/index-tophat-v-1-0/",
            "/analysis-steps/lrna-se-star-alignment-step-v-1/",
            "/analysis-steps/lrna-se-rsem-quantification-step-v-1/",
            "/analysis-steps/lrna-se-tophat-alignment-step-v-1/",
            "/analysis-steps/lrna-se-star-unstranded-signals-for-tophat-step-v-1/",
            "/analysis-steps/lrna-se-star-unstranded-signal-step-v-1/"
        ]
    },
    {
        "@id": "/pipelines/ENCPL002LPE/",
        "alternate_accessions": ["ENCPL086BPC"],
        "analysis_steps": [
            "/analysis-steps/index-rsem-v-1-0/",
            "/analysis-steps/index-star-v-1-0/",
            "/analysis-steps/index-tophat-v-1-0/",
            "/analysis-steps/lrna-pe-star-alignment-step-v-1/",
            "/analysis-steps/lrna-pe-rsem-quantification-v-1/",
            "/analysis-steps/lrna-pe-tophat-alignment-step-v-1/",
            "/analysis-steps/lrna-pe-star-stranded-signal-step-v-1/",
            "/analysis-steps/lrna-pe-star-stranded-signals-for-tophat-step-v-1/"
        ]
    }
]