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Genotype changes in GWAS are ambiguous #196

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joshua-slaughter opened this issue Oct 7, 2024 · 0 comments · May be fixed by #197
Open

Genotype changes in GWAS are ambiguous #196

joshua-slaughter opened this issue Oct 7, 2024 · 0 comments · May be fixed by #197
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@joshua-slaughter
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Issue where genotypes in GWAS are ambiguous to the user when reading results. Issue originally raised in targene-pipeline.

  1. Implement string interpretation of genotypes
  2. If the implementation in 1 is too burdensome have a common coding for major-major, major-minor, and minor-minor(e.g 0,1,2)
@joshua-slaughter joshua-slaughter self-assigned this Oct 7, 2024
@joshua-slaughter joshua-slaughter linked a pull request Oct 8, 2024 that will close this issue
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