From 0d7a80033e895a1beb485b256ee615dcd91f42e5 Mon Sep 17 00:00:00 2001 From: ktpolanski Date: Tue, 1 Aug 2023 09:35:41 +0000 Subject: [PATCH] links in toml and readme --- README.md | 8 ++++---- pyproject.toml | 2 ++ 2 files changed, 6 insertions(+), 4 deletions(-) diff --git a/README.md b/README.md index cb22adf..4d29fa5 100644 --- a/README.md +++ b/README.md @@ -15,15 +15,15 @@ ## Installation ```bash -pip install git+https://github.com/Teichlab/sctk.git +pip install sctk ``` -It is recommended to install sctk into a fresh python 3.9 virtual environment due to its large amount of dependencies. If you encounter a dependency conflict when installing into a fresh environment, try updating pip: +If you encounter dependency clashes, create a fresh python 3.9 virtual environment (e.g. via conda) and install SCTK there. It may also help to update pip: ```bash pip install --upgrade pip ``` -## Usage +## Usage and Documentation -An example of applying the automatic QC workflow can be found in the [demo notebook](notebooks/automatic_qc.ipynb). +SCTK's documentation is available [here](https://teichlab.github.io/sctk/), and features a tutorial and API reference for the automated QC workflow. diff --git a/pyproject.toml b/pyproject.toml index 55efa0f..bec517f 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -9,6 +9,8 @@ authors = [ ] license = "GPL-3.0" readme = "README.md" +homepage = "https://github.com/Teichlab/sctk" +documentation = "https://teichlab.github.io/sctk/" [tool.poetry.dependencies] python = "^3.9"