08_nf-core_and_mag_EVEREST.md

SEMINAR 8: Introduction to the nf-core/mag pipeline and EVEREST

Video link: https://vimeo.com/873196097

Presenter: Abhinav, Patricia

Links/Resources used:

1. nf-core/mag pipeline
   1. Main page: https://nf-co.re/mag
      • Pipeline summary: https://nf-co.re/mag#pipeline-summary
   2. Usage: https://nf-co.re/mag/2.3.1/usage
      • Input specifications: https://nf-co.re/mag/2.3.1/usage#input-specifications
   3. Parameters: https://nf-co.re/mag/2.3.1/parameters
      • Input/output options: https://nf-co.re/mag/2.3.1/parameters
   4. Output docs: https://nf-co.re/mag/2.3.1/output

2. nf-core/mag Github: https://github.com/nf-core/mag/tree/master

   • Test config: https://github.com/nf-core/mag/blob/master/conf/test.config

3. EVEREST