plot_02-WordsAnalysis.ipynb

{
 "cells": [
  {
   "cell_type": "code",
   "execution_count": 1,
   "metadata": {},
   "outputs": [],
   "source": [
    "%matplotlib inline"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "\n",
    "# Tutorial 02: Words Analysis\n",
    "\n",
    "Analyzing collected text data and metadata.\n"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "## Words Analyses\n",
    "\n",
    "This tutorial covers exploring & analyzing words data.\n",
    "\n",
    "For this tutorial, we will reload and use the :class:`~.Words` object with\n",
    "the data that we collected in the last tutorial.\n",
    "\n",
    "Note that this tutorial requires some optional dependencies, including the\n",
    "`WordCloud <https://github.com/amueller/word_cloud>`_ module.\n",
    "\n",
    "\n"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 2,
   "metadata": {},
   "outputs": [],
   "source": [
    "# Import the custom objects that are used to store collected words data\n",
    "from lisc.data import Articles, ArticlesAll\n",
    "\n",
    "# Import database and IO utilities to reload our previously collected data\n",
    "from lisc.utils.db import SCDB\n",
    "from lisc.utils.io import load_object\n",
    "\n",
    "# Import plots that are available for words data\n",
    "from lisc.plts.words import plot_wordcloud\n",
    "\n",
    "import scispacy\n",
    "import spacy\n",
    "nlp = spacy.load(\"en_ner_bionlp13cg_md\")"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "### Articles Object\n",
    "\n",
    "LISC uses custom objects to store and organize collected words data.\n",
    "\n",
    "These objects are used internally in the :class:`~.Words` objects.\n",
    "\n",
    "If the data collection was set to save out data as it was collected, then\n",
    ":obj:`~.Articles` objects can be loaded individually, using the label\n",
    "of the search term.\n",
    "\n",
    "\n"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 14,
   "metadata": {},
   "outputs": [],
   "source": [
    "# Set up database object\n",
    "db = SCDB('lisc_db')\n",
    "\n",
    "# Load raw data for a particular term\n",
    "term = 'whipworm'\n",
    "\n",
    "arts = Articles(term)\n",
    "arts.load(db)"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "### ArticlesAll Object\n",
    "\n",
    "The :obj:`~.ArticlesAll` object aggregates collected data across all articles collected\n",
    "for a given search term.\n",
    "\n",
    "\n"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 15,
   "metadata": {},
   "outputs": [],
   "source": [
    "# Collapse data across articles\n",
    "arts_all = ArticlesAll(arts)"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "It also has methods to create and check summaries created from the aggregate data.\n",
    "\n",
    "\n"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 16,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "whipworm :\n",
      "  Number of articles: \t\t 99\n",
      "  First publication: \t\t 2017\n",
      "  Most common author: \t\t Keiser J\n",
      "    number of publications: \t 6\n",
      "  Most common journal: \t\t PLoS neglected tropical diseases\n",
      "    number of publications: \t 6 \n",
      "\n"
     ]
    }
   ],
   "source": [
    "# Check an example summary\n",
    "arts_all.create_summary()\n",
    "arts_all.print_summary()"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "### Words Object\n",
    "\n",
    "The :class:`~.Words` object can also be used to reload and analyze collected data.\n",
    "\n",
    "The `results` attribute contains a list of :class:`~.Articles` objects, one for each term.\n",
    "\n",
    "\n"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 17,
   "metadata": {},
   "outputs": [],
   "source": [
    "# Reload the words object, specifying to also reload the article data\n",
    "words = load_object('tutorial_words', directory=SCDB('lisc_db'), reload_results=True)"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "Note that the reloaded data is the raw data from the data collection.\n",
    "\n",
    "The :meth:`~.Words.process_articles` method can be used to do some preprocessing on the\n",
    "collected data.\n",
    "\n",
    "By default, the :func:`~.process_articles` function is used to process articles, which\n",
    "preprocesses journal and author names, and tokenizes the text data. You can also pass in\n",
    "a custom function to apply custom processing to the collected articles data.\n",
    "\n",
    "Note that some processing steps, like converting to the ArticlesAll representation,\n",
    "will automatically apply article preprocessing.\n",
    "\n",
    "\n"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 18,
   "metadata": {},
   "outputs": [],
   "source": [
    "# Preprocess article data\n",
    "words.process_articles()"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "We can also aggregate data across articles, just as we did before, directly in the Words object.\n",
    "\n",
    "If you run the :meth:`~.Words.process_combined_results` method, then the\n",
    "`combined_results` attribute will contain the corresponding list of\n",
    ":class:`~.ArticlesAll` objects, also one for each term.\n",
    "\n",
    "\n"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 19,
   "metadata": {},
   "outputs": [],
   "source": [
    "# Process collected data into aggregated data objects\n",
    "words.process_combined_results()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 20,
   "metadata": {},
   "outputs": [],
   "source": [
    "# doc = nlp(\"gut\")\n",
    "\n",
    "# for token in doc:\n",
    "#     print(token.text, token.pos_, token.ent_type_, token.head.text)\n",
    "\n",
    "symptoms_list = ['microbiome', 'microbiota', 'gut', 'microbial', 'metabolites', 'anemia',  \n",
    "                 'intestinal', 'obstruction',  'growth', 'faltering',  \n",
    "                 'abdominal', 'pain', 'vomiting', 'cholangitis', \n",
    "                 'pancreatitis', 'anorexia', 'weight',  'gall', 'bladder', 'cancer', 'gallbladder',  \n",
    "                 'cough',  'developmental', 'delay', 'hyperactivity']\n",
    "\n",
    "\n",
    "term_list = [\"roundworm\", \"whipworm\", \"hookworms\"]"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 21,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "------- roundworm -------\n",
      "intestinal - 86 [  ]\n",
      "abdominal - 14 [  ]\n",
      "pain - 15 [  ]\n",
      "obstruction - 8 [  ]\n",
      "bladder - 5 [ ORGAN ]\n",
      "gallbladder - 4 [ ORGAN ]\n",
      "microbiota - 4 [  ]\n",
      "cholangitis - 4 [  ]\n",
      "weight - 2 [  ]\n",
      "gut - 3 [ ORGANISM_SUBDIVISION ]\n",
      "metabolites - 2 [  ]\n",
      "developmental - 2 [  ]\n",
      "growth - 2 [  ]\n",
      "anorexia - 2 [  ]\n",
      "cancer - 3 [ CANCER ]\n",
      "pancreatitis - 14 [  ]\n",
      "\n",
      "\n",
      "------- whipworm -------\n",
      "intestinal - 86 [  ]\n",
      "metabolites - 2 [  ]\n",
      "weight - 2 [  ]\n",
      "developmental - 2 [  ]\n",
      "abdominal - 14 [  ]\n",
      "gut - 3 [ ORGANISM_SUBDIVISION ]\n",
      "growth - 2 [  ]\n",
      "microbiota - 4 [  ]\n",
      "cancer - 3 [ CANCER ]\n",
      "pain - 15 [  ]\n",
      "\n",
      "\n",
      "------- hookworms -------\n",
      "metabolites - 2 [  ]\n",
      "weight - 2 [  ]\n",
      "growth - 2 [  ]\n",
      "intestinal - 86 [  ]\n",
      "cancer - 3 [ CANCER ]\n",
      "microbiota - 4 [  ]\n",
      "gut - 3 [ ORGANISM_SUBDIVISION ]\n",
      "developmental - 2 [  ]\n",
      "abdominal - 14 [  ]\n",
      "\n",
      "\n"
     ]
    }
   ],
   "source": [
    "for num in range(0,3):\n",
    "    print(\"-------\", term_list[num],\"-------\")\n",
    "    for i in words.combined_results[num].words:\n",
    "        doc = nlp(i)\n",
    "        for token in doc:\n",
    "            if(token.pos_ == \"NOUN\" or token.pos_ == \"ADJ\"):\n",
    "                if(words.combined_results[0].words[i] > 1 and i in symptoms_list):\n",
    "                    print(i, \"-\", words.combined_results[0].words[i], \"[\", token.ent_type_,\"]\")\n",
    "                    \n",
    "    print()\n",
    "    print()\n",
    "                    "
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 11,
   "metadata": {},
   "outputs": [],
   "source": [
    "# Plot a WordCloud of the collected data for the first term\n",
    "# plot_wordcloud(words.combined_results[1].words, 25)"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "## Exploring Words Data\n",
    "\n",
    "The :class:`~.Words` object also has some methods for exploring the data, including\n",
    "allowing for indexing into and looping through collected results.\n",
    "\n",
    "\n"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 12,
   "metadata": {},
   "outputs": [],
   "source": [
    "# # Index results for a specific label\n",
    "# print(words['roundworm'])"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "You can also loop through all the articles found for a specified search term.\n",
    "\n",
    "The iteration returns a dictionary with all the article data, which can be examined.\n",
    "\n",
    "\n"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 13,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "Mucosal Vaccination With Recombinant Tm-WAP49 Protein Induces Protective Humoral and Cellular Immunity Against Experimental Trichuriasis in AKR Mice.\n",
      "['trichuriasis', 'one', 'common', 'neglected', 'tropical', 'diseases', 'worlds', 'poorest', 'people', 'recombinant', 'vaccine', 'composed', 'tm-wap49', 'immunodominant', 'antigen', 'secreted', 'adult', 'trichuris', 'stichocytes', 'mucosa', 'cecum', 'parasite', 'attaches', 'development', 'prototype', 'evaluated', 'mouse', 'model', 'trichuris', 'muris', 'infection', 'ultimate', 'goal', 'producing', 'mucosal', 'vaccine', 'intranasal', 'delivery', 'intranasal', 'immunization', 'mice', 'tm-wap49', 'formulated', 'adjuvant', 'och', 'truncated', 'analog', 'alpha-galcer', 'adjuvanticity', 'stimulate', 'natural', 'killer', 'cells', 'nkt', 'mucosal', 'immunity', 'induced', 'significantly', 'high', 'levels', 'igg', 'subclasses', 'igg1', 'igg2a', 'immunized', 'mice', 'also', 'resulted', 'significant', 'reduction', 'worm', 'burden', 'challenge', 'muris-infective', 'eggs', 'addition', 'qs-21', 'adjuvant', 'vaccine', 'formulation', 'reduced', 'worm', 'counts', 'improved', 'protection', 'dual-adjuvanted', 'vaccine', 'correlated', 'higher', 'serum', 'antibody', 'responses', 'igg', 'igg1', 'igg2a', 'iga', 'well', 'induction', 'antigen-specific', 'iga', 'nasal', 'mucosa', 'also', 'associated', 'robust', 'cellular', 'responses', 'including', 'functional', 'subsets', 'cd4', 'cells', 'producing', 'il-4', 'cytotoxic', 'cd8', 'cells', 'expressing', 'granzyme', 'b', 'worm', 'reduction', 'achieved', 'mucosal', 'immunization', 'higher', 'induced', 'subcutaneous', 'immunization', 'intranasal', 'immunization', 'also', 'induced', 'significantly', 'higher', 'nasal', 'mucosa-secreted', 'antigen-specific', 'iga', 'response', 'well', 'higher', 'functional', 'cellular', 'responses', 'including', 'cd4il4', 'th1', 'cd8gnzb', 'th2', 'cells', 'antigen-specific', 'infγ-producing', 'cells', 'spleen', 'mlns', 'antibody-producing', 'b', 'cells', 'cd19b220/b220gl7', 'mucosal', 'immunization', 'induced', 'long-term', 'lymphocyte', 'memory', 'increased', 'central', 'cd62lcd44', 'effector', 'cd62l-cd44', 'memory', 'subsets', 'cd4', 'cd8', 'cells', '60', 'days', 'last', 'immunization', 'summary', 'intranasal', 'immunization', 'recombinant', 'tm-wap49', 'protein', 'induced', 'strong', 'protection', 'versus', 'murine', 'trichuriasis', 'represents', 'promising', 'vaccination', 'approach', 'intestinal', 'nematodes']\n",
      "\n",
      "Concurrent allergy and helminthiasis in underprivileged urban South African adults previously residing in rural areas.\n",
      "['study', 'investigated', 'whether', 'prior', 'exposure', 'helminths', 'ascaris', 'ige', 'ascaris', 'eggs', 'trichuris', 'eggs', 'either', 'childhood', 'adulthood', 'residence', 'rural', 'resource-limited', 'urban', 'areas', 'influence', 'allergy', 'outcomes', 'asthma', 'rhinitis', 'ige', 'atopy', 'food', 'allergy', 'south', 'african', 'population', 'participants', 'historical', 'present', 'allergies', 'data', 'collected', 'questionnaires', 'clinical', 'record', 'files', 'coproscopy', 'immunoassays', 'immunocaptm', 'phadiatop', 'total', 'ige', 'allergin-specific', 'fx3', 'ige', 'immunoassays', 'ascaris', 'ige', 'radioallergosorbent', 'rast', 'tests', 'used', 'active', 'helminthiasis', 'allergy', 'screens', 'respectively', 'data', 'analyzed', 'using', 'logistic', 'regression', 'analysis', 'models', 'adjusted', 'age', 'gender', 'locality', 'high', 'ascaris', 'ige', 'significantly', 'associated', 'asthma', 'aor2.20', 'p0.047', 'ige', 'atopy', 'aor18.18', 'p0.0001', 'food', 'allergy', 'aor14.47', 'p0.0001', 'asthma', 'significantly', 'less', 'likely', 'among', 'participants', 'ascaris', 'eggs', 'aor0.43', 'p0.048', 'trichuris', 'eggs', 'aor0.36', 'p0.024', 'findings', 'co-occurrent', 'helminthiasis', 'allergic', 'disorders', 'population', 'resided', 'rural', 'peri-urban', 'informal', 'settlements', 'oppose', 'agree', 'two', 'main', 'notions', 'hygiene', 'hypothesis', 'individuals', 'residing', 'rural', 'settings', 'poor', 'sanitation', 'geohelminth', 'infection', 'less', 'prone', 'allergy', 'ii', 'helminth', 'infections', 'protect', 'allergy', 'respectively', 'research', 'warranted']\n",
      "\n",
      "Bacterial communities from Trichuris spp. A contribution to deciphering the role of parasitic nematodes as vector of pathogens.\n",
      "['microbiome', 'taxa', 'associated', 'parasitic', 'nematodes', 'unknown', 'invertebrate', 'parasites', 'could', 'act', 'reservoirs', 'vectors', 'horizontally', 'transferred', 'virulence', 'factors', 'could', 'also', 'provide', 'potential', 'pool', 'future', 'emerging', 'pathogens', 'trichuris', 'trichiura', 'trichuris', 'suis', 'geohelminths', 'parasitizing', 'caecum', 'primates', 'including', 'humans', 'pigs', 'respectively', 'present', 'work', 'preliminary', 'study', 'evaluate', 'bacterial', 'communities', 'associated', 'trichiura', 'suis', 'using', 'high', 'throughput', 'sequencing', 'checking', 'possible', 'presence', 'pathogens', 'nematodes', 'determine', 'whether', 'parasitic', 'helminths', 'act', 'vectors', 'bacterial', 'pathogens', 'human', 'animal', 'hosts', 'five', 'trichiura', 'adult', 'specimens', 'obtained', 'caecum', 'macaque', 'macaca', 'sylvanus', 'two', 'suis', 'adults', 'collected', 'caecum', 'swine', 'sus', 'scrofa', 'domestica', '16s', 'rrna', 'gene', 'hts', 'approach', 'employed', 'investigate', 'composition', 'diversity', 'bacterial', 'communities', 'trichuris', 'spp', 'special', 'emphasis', 'intestinal', 'level', 'samples', 'showed', 'rich', 'colonization', 'bacteria', 'included', 'preferently', 'phyla', 'proteobacteria', 'firmicutes', 'actinobacteria', 'bacteroidetes', 'cyanobacteria', 'verrucomicrobia', 'total', '36', 'phyla', '200', 'families', 'identified', 'samples', 'potential', 'pathogen', 'bacteria', 'detected', 'helminths', 'related', 'genera', 'bartonella', 'mycobacterium', 'rickettsia', 'salmonella', 'escherichia/shigella', 'aeromonas', 'clostridium', 'presence', 'pathogenic', 'bacteria', 'trichuris', 'spp', 'would', 'position', 'species', 'new', 'threat', 'humans', 'since', 'nematodes', 'could', 'spread', 'new', 'diseases', 'study', 'also', 'contribute', 'understanding', 'host-microbiota', 'relation']\n",
      "\n",
      "Sertraline as a new potential anthelmintic against Haemonchus contortus: toxicity, efficacy, and biotransformation.\n",
      "['haemonchus', 'contortus', 'parasitic', 'nematode', 'ruminants', 'causes', 'significant', 'losses', 'many', 'farmers', 'worldwide', 'since', 'drugs', 'currently', 'use', 'treatment', 'haemonchosis', 'losing', 'effectiveness', 'due', 'drug-resistance', 'nematode', 'new', 'repurposed', 'drug', 'highly', 'needed', 'antipsychotic', 'drug', 'sertraline', 'srt', 'shown', 'effective', 'parasitic', 'nematodes', 'trichuris', 'muris', 'ancylostoma', 'caninum', 'schistosoma', 'mansoni', 'aim', 'present', 'study', 'evaluate', 'possible', 'effect', 'srt', 'h', 'contortus', 'potential', 'hepatotoxicity', 'srt', 'tested', 'sheep', 'common', 'h', 'contortus', 'host', 'addition', 'main', 'metabolic', 'pathways', 'srt', 'h.', 'contortus', 'ovine', 'liver', 'identified', 'effect', 'srt', 'h', 'contortus', 'egg', 'hatching', 'observed', 'srt', 'found', 'significantly', 'decrease', 'viability', 'h', 'contortus', 'adults', 'drug-sensitive', 'resistant', 'strains', 'effect', 'comparable', 'commonly', 'used', 'anthelmintics', 'levamisole', 'monepantel', 'moreover', 'srt', 'anthelmintically', 'active', 'concentrations', 'showed', 'toxicity', 'ovine', 'liver', 'biotransformation', 'srt', 'h', 'contortus', 'weak', 'drug', 'remaining', 'unmetabolized', 'production', 'main', 'metabolite', 'hydroxy-srt', 'differ', 'significantly', 'strains', 'minor', 'metabolites', 'srt-o-glucoside', 'dihydroxy-srt', 'srt-ketone', 'also', 'identified', 'h', 'contorts', 'adults', 'compared', 'h.', 'contortus', 'ovine', 'liver', 'metabolized', 'srt', 'extensively', 'mainly', 'via', 'desmethylation', 'glucuronidation', 'conclusion', 'potency', 'srt', 'h', 'contortus', 'proven', 'tested', 'toward', 'possible', 'repurposing']\n",
      "\n",
      "Significant Leukocytosis with Hypereosinophilia Secondary to Trichuris trichiura in Adult: A Case Report.\n",
      "['eosinophilic', 'leukocytosis', 'attributed', 'number', 'clinical', 'conditions', 'parasitic', 'infection', 'allergies', 'neoplasms', 'parasitic', 'infection', 'main', 'cause', 'eosinophilia', 'however', 'marked', 'leukocytosis', 'hypereosinophilia', 'secondary', 'trichuris', 'trichiura', 'adults', 'previously', 'reported', 'describe', 'case', '39-year-old', 'man', 'presented', 'fever', 'diarrhea', 'investigation', 'revealed', 'white', 'blood', 'cell', 'wbc', 'count', '20.69', '×', '109/l', 'absolute', 'eosinophil', 'count', '12.44', '×', '109/l', 'fecal', 'microscopic', 'examination', 'demonstrated', 'trichuria', 'eggs', 'wbc', 'count', 'returned', 'normal', 'following', 'treatment', 'albendazole', 'literature', 'pertaining', 'hematological', 'findings', 'associated', 'trichuris', 'trichiura', 'explored', 'report', 'case', 'highlights', 'significant', 'elevation', 'leukocyte', 'count', 'hypereosinophilia', 'one', 'manifestations', 'trichuriasis', 'infection', 'adults', 'empirical', 'treatment', 'anti-helminthic', 'agents', 'may', 'play', 'role', 'suspected', 'cases', 'avoid', 'severe', 'complications', 'trichuris', 'dysentery', 'syndrome']\n",
      "\n",
      "Population Pharmacokinetic-Pharmacodynamic Model of Oxfendazole in Healthy Adults in a Multiple Ascending Dose and Food Effect Study and Target Attainment Analysis.\n",
      "['oxfendazole', 'potent', 'veterinary', 'antiparasitic', 'drug', 'undergoing', 'development', 'human', 'use', 'treat', 'multiple', 'parasitic', 'infections', 'results', 'two', 'recently', 'completed', 'phase', 'clinical', 'trials', 'conducted', 'healthy', 'adults', 'showed', 'pharmacokinetics', 'oxfendazole', 'nonlinear', 'affected', 'food', 'administration', 'repeated', 'doses', 'appeared', 'mildly', 'affect', 'hemoglobin', 'concentrations', 'facilitate', 'oxfendazole', 'dose', 'optimization', 'use', 'patient', 'populations', 'relationship', 'among', 'oxfendazole', 'dose', 'pharmacokinetics', 'hemoglobin', 'concentration', 'quantitatively', 'characterized', 'using', 'population', 'pharmacokinetic-pharmacodynamic', 'modeling', 'fasting', 'subjects', 'oxfendazole', 'pharmacokinetics', 'well', 'described', 'one-compartment', 'model', 'first-order', 'absorption', 'elimination', 'change', 'oxfendazole', 'pharmacokinetics', 'administered', 'following', 'fatty', 'meal', 'captured', 'absorption', 'model', 'one', 'transit', 'compartment', 'increased', 'bioavailability', 'effect', 'oxfendazole', 'exposure', 'hemoglobin', 'concentration', 'healthy', 'adults', 'characterized', 'life', 'span', 'indirect', 'response', 'model', 'oxfendazole', 'positive', 'minor', 'inhibitory', 'effect', 'red', 'blood', 'cell', 'synthesis', 'simulation', 'indicated', 'oxfendazole', 'low', 'risk', 'posing', 'safety', 'concern', 'regarding', 'hemoglobin', 'concentration', 'even', 'high', 'oxfendazole', 'dose', '60', 'mg/kg', 'body', 'weight', 'daily', 'final', 'model', 'used', 'perform', 'comprehensive', 'target', 'attainment', 'simulations', 'whipworm', 'infection', 'filariasis', 'various', 'dose', 'regimens', 'target', 'attainment', 'criteria', 'results', 'modeling', 'work', 'adopted', 'appropriately', 'potential', 'greatly', 'facilitate', 'oxfendazole', 'dose', 'regimen', 'optimization', 'patient', 'populations', 'different', 'types', 'parasitic', 'infections']\n",
      "\n",
      "Contamination of Soil and Vegetation with Developmental Forms of Parasites in the Area of the Federation of Bosnia and Herzegovina.\n",
      "['according', '2019', '1.5', 'billion', 'people', 'worldwide', 'infected', 'soil-transmitted', 'parasites', 'previous', 'research', 'federation', 'bosnia', 'herzegovina', 'fbh', 'mainly', 'conducted', 'area', 'sarajevo', 'canton', 'therefore', 'aim', 'research', 'explore', 'contamination', 'soil', 'vegetation', 'developmental', 'forms', 'parasites', 'cantons', 'fbh', 'apr', 'oct', '2018', 'total', '1,618', 'soil', 'vegetation', 'samples', 'taken', '386', 'different', 'locations', '9', 'cantons', 'fbh', 'positive', 'samples', 'observed', '65/66', '98.48', 'municipalities/cities', '239/386', '61.92', 'locations', '1,618', 'samples', 'taken', 'total', '1,263', 'soil', 'samples', '355', 'vegetation', 'samples', '357', '22.06', 'positive', '337', '26.68', '20', '5.63', 'soil', 'plant', 'samples', 'respectively', 'total', 'following', 'adult', 'developmental', 'forms', 'identified', 'taeniidae', 'eggs', '7.30', 'toxocara', 'spp', 'eggs', '62.08', 'ancylostomatidae', 'eggs', '25.00', 'trichuris', 'spp', 'eggs', '9.55', 'capillaria', 'spp', 'eggs', '3.37', 'toxascaris', 'leonina', 'eggs', '1.40', 'nematodes', 'larvae', '19.38', 'giardia', 'duodenalis', 'cysts', '5.06', 'cryptosporidium', 'spp', 'oocysts', '1.4', 'oocysts', 'cysts', 'different', 'species', 'protozoa', '3.93', 'identified', 'developmental', 'forms', 'parasites', 'pose', 'permanent', 'threat', 'human', 'health', 'necessary', 'carry', 'measures', 'reduce', 'contamination', 'soil', 'vegetation', 'coordination', 'systematic', 'solutions', 'legislation', 'paralelly', 'contribution', 'animal', 'owners', 'veterinarians', 'physicians', 'ecologists', 'parents', 'others', 'involved', 'issue']\n",
      "\n",
      "Host and geographic differences in prevalence and diversity of gastrointestinal helminths of foxes (Vulpes vulpes), coyotes (Canis latrans) and wolves (Canis lupus) in Québec, Canada.\n",
      "['wild', 'canids', 'hosts', 'wide', 'range', 'parasites', 'play', 'role', 'transmission', 'zoonoses', 'many', 'parasites', 'transmitted', 'food', 'webs', 'wild', 'canids', 'high', 'trophic', 'levels', 'parasite', 'prevalence', 'diversity', 'wild', 'canids', 'serve', 'excellent', 'indicators', 'ecosystem', 'health', 'main', 'objectives', 'update', 'knowledge', 'composition', 'gastrointestinal', 'helminths', 'wild', 'canids', 'québec', 'canada', 'describe', 'differences', 'parasite', 'prevalence', 'diversity', 'among', 'canid', 'species', 'regions', 'hunters', 'trappers', 'provided', 'whole', 'carcasses', 'red', 'foxes', 'vulpes', 'vulpes', 'n', '176', 'intestinal', 'tracts', 'coyotes', 'canis', 'latrans', 'n', '77', 'gray', 'wolves', 'canis', 'lupus', 'n', '23', 'harvested', 'non-research', 'purposes', 'winter', '2016-2017', 'modified', 'stolls', 'centrifugation', 'sucrose', 'flotation', 'feces', '250', 'wild', 'canids', 'used', 'eggs', 'one', 'family', 'eight', 'genera', 'parasitic', 'helminths', 'recovered', 'diphyllobothriids', 'taenia/echinococcus', 'spp', 'capillaria', 'spp', 'toxascaris', 'sp', 'toxocara', 'sp', 'trichuris', 'sp', 'uncinaria', 'sp', 'metorchis', 'sp', 'adult', 'taenia', 'spp', 'cestodes', 'recovered', '61', '276', '22', 'canids', 'six', 'different', 'species', 'hydatigena', 'twitchelli', 'crassiceps', 'polyacantha', 'krabbei', 'pisiformis-like', 'differentiated', 'based', 'dna', 'sequenced', '65', 'individual', 'adult', 'cestodes', 'using', 'primers', 'nicotinamide', 'adenosine', 'dinucleotide', 'dehydrogenase', 'subunit', '1', 'nd1', 'cytochrome', 'c', 'oxidase', 'subunit', '1', 'co1', 'mitochondrial', 'dna', 'loci', 'alaria', 'sp', 'trematodes', 'infected', '89', '276', 'canids', '32', 'subset', 'identified', 'americana', 'co1', 'locus', 'marine', 'trematode', 'cryptocotyle', 'lingua', 'reported', 'first', 'time', 'foxes', 'province', 'québec', 'results', 'help', 'us', 'understand', 'fully', 'predator-prey', 'relationships', 'within', 'group', 'canids', 'baseline', 'data', 'regional', 'parasite', 'prevalence', 'intensity', 'critical', 'order', 'detect', 'future', 'changes', 'following', 'ecological', 'disturbances', 'due', 'climate', 'landscape', 'alterations']\n",
      "\n",
      "Linking Behavior, Co-infection Patterns, and Viral Infection Risk With the Whole Gastrointestinal Helminth Community Structure in Mastomys natalensis.\n",
      "['infection', 'probability', 'load', 'community', 'structure', 'helminths', 'varies', 'strongly', 'within', 'animal', 'populations', 'ascribed', 'environmental', 'stochasticity', 'due', 'individual', 'characteristics', 'host', 'age', 'sex', 'understudied', 'factors', 'hosts', 'behavior', 'co-infection', 'patterns', 'study', 'used', 'multimammate', 'mouse', 'mastomys', 'natalensis', 'model', 'system', 'investigate', 'hosts', 'sex', 'age', 'exploration', 'behavior', 'viral', 'infection', 'history', 'affects', 'infection', 'risk', 'parasitic', 'load', 'community', 'structure', 'gastrointestinal', 'helminths', 'hypothesized', 'hosts', 'exploration', 'behavior', 'would', 'play', 'key', 'role', 'risk', 'infection', 'different', 'gastrointestinal', 'helminths', 'whereby', 'highly', 'explorative', 'individuals', 'would', 'higher', 'infection', 'risk', 'leading', 'wider', 'diversity', 'helminths', 'larger', 'load', 'compared', 'less', 'explorative', 'individuals', 'fieldwork', 'performed', 'morogoro', 'tanzania', 'trapped', 'total', '214', 'individual', 'mice', 'exploratory', 'behavior', 'characterized', 'using', 'hole-board', 'test', 'collected', 'helminths', 'inside', 'gastrointestinal', 'tract', 'study', 'found', 'helminths', 'belonging', 'eight', 'different', 'genera', 'hymenolepis', 'sp', 'protospirura', 'muricola', 'syphacia', 'sp', 'trichuris', 'mastomysi', 'gongylonema', 'sp', 'pterygodermatites', 'sp', 'raillietina', 'sp', 'inermicapsifer', 'sp', 'one', 'family', 'trichostrongylidae', 'hierarchical', 'modeling', 'species', 'communities', 'hmsc', 'used', 'investigate', 'effect', 'different', 'host-related', 'factors', 'infection', 'probability', 'parasite', 'load', 'community', 'structure', 'helminths', 'results', 'show', 'species', 'richness', 'higher', 'adults', 'females', 'compared', 'juveniles', 'males', 'respectively', 'contrary', 'expectations', 'found', 'less', 'explorative', 'individuals', 'higher', 'infection', 'probability', 'different', 'helminths', 'resulting', 'higher', 'diversity', 'could', 'due', 'higher', 'exposure', 'rate', 'helminths', 'and/or', 'behavioral', 'modification', 'due', 'infection']\n",
      "\n",
      "Safety and tolerability of medicinal parasite ova (Trichuris suis) in healthy Japanese volunteers: A randomized, double-blind, placebo-controlled trial.\n",
      "['trichuris', 'suis', 'ova', 'tso', 'potential', 'modulate', 'human', 'immune', 'system', 'tested', 'therapeutic', 'application', 'autoimmune', 'allergic', 'diseases', 'inflammatory', 'bowel', 'disease', 'ibd', 'previous', 'clinical', 'studies', 'limited', 'european', 'american', 'participants', 'whereas', 'asian', 'populations', 'well', 'documented', 'study', 'clinical', 'trial', 'conducted', 'examine', 'safety', 'tolerability', 'tso', 'administration', 'among', 'healthy', 'japanese', 'population', 'study', 'randomized', 'double-blind', 'placebo-controlled', 'trial', 'held', 'jikei', 'university', 'hospital', 'tokyo', 'twelve', 'volunteers', 'stratified', 'three', 'groups', 'receiving', 'different', 'doses', 'tso', 'tso', '1000', '2500', '7500', 'another', 'control', 'group', 'cases', 'limited', 'healthy', 'japanese', 'men', 'aged', '20', 'years', 'old', 'single', 'doses', 'medicinal', 'tso', 'placebo', 'given', 'three', 'participants', 'group', 'participants', 'followed', '56', 'days', 'ingestion', 'follow-up', 'period', 'clinical', 'practitioners', 'checked', 'participant', 'clinic', '7', '14', '28', '56', 'days', 'post-ingestion', 'dpi', 'clinical', 'symptoms', 'evaluated', 'using', 'questionnaire-based', 'self-reporting', 'participants', 'filled', 'every', 'visit', 'blood', 'samples', 'drawn', '7', '14', '28', '56', 'dpi', 'fecal', 'samples', 'collected', '28', '56', 'dpi', 'study', 'period', 'twelve', 'healthy', 'japanese', 'male', 'volunteers', 'enrolled', 'participants', 'completed', 'follow-up', 'period', 'severe', 'adverse', 'events', 'observed', 'study', 'period', 'groups', 'three', 'participants', 'tso', '1000', '2500', '7500', 'groups', 'mild', 'moderate', 'abdominal', 'symptoms', 'diarrhea', 'bloating', 'appetite', 'loss', 'observation', 'period', 'one', 'participant', 'placebo', 'group', 'presented', 'mild', 'diarrhea', 'microscopic', 'examination', 'identified', 'parasite', 'ova', 'fecal', 'samples', 'blood', 'sample', 'examination', 'indicated', 'elevated', 'eosinophil', 'count', 'several', 'cases', 'especially', 'groups', 'higher', 'dose', 'tso', 'extra-abdominal', 'symptoms', 'present', 'cases', 'healthy', 'japanese', 'people', 'tolerated', 'doses', 'tso', 'without', 'severe', 'adverse', 'events', 'hand', 'mild', 'moderate', 'abdominal', 'symptoms', 'observed', 'several', 'participants', 'study', 'suggested', 'medicinal', 'use', 'tso', 'japan', 'relatively', 'safe', 'close', 'follow-up', 'recommended', 'sustainable', 'usage']\n",
      "\n",
      "Effect of co-infection with intestinal parasites on COVID-19 severity: A prospective observational cohort study.\n",
      "['background', 'severe', 'acute', 'respiratory', 'syndrome', 'coronavirus', '2', 'sars-cov-2', 'infection', 'results', 'spectrum', 'clinical', 'presentations', 'evidence', 'africa', 'indicates', 'significantly', 'less', 'covid-19', 'patients', 'suffer', 'serious', 'symptoms', 'industrialized', 'world', 'others', 'previously', 'postulated', 'partial', 'explanation', 'phenomenon', 'different', 'activated', 'immune', 'system', 'due', 'parasite', 'infections', 'aimed', 'test', 'hypothesis', 'investigating', 'potential', 'correlation', 'co-infection', 'parasites', 'covid-19', 'severity', 'endemic', 'area', 'africa', 'methods', 'ethiopian', 'covid-19', 'patients', 'enrolled', 'screened', 'intestinal', 'parasites', 'july', '2020', 'march', '2021', 'primary', 'outcome', 'proportion', 'patients', 'severe', 'covid-19', 'ordinal', 'logistic', 'regression', 'models', 'used', 'estimate', 'association', 'parasite', 'infection', 'covid-19', 'severity', 'models', 'adjusted', 'sex', 'age', 'residence', 'education', 'level', 'occupation', 'body', 'mass', 'index', 'comorbidities', 'findings', '751', 'sars-cov-2', 'infected', 'patients', 'enrolled', '284', '37.8', 'intestinal', 'parasitic', 'infection', '27/255', '10.6', 'severe', 'covid-19', 'patients', 'co-infected', 'intestinal', 'parasites', '257/496', '51.8', 'non-severe', 'covid-19', 'patients', 'parasite', 'positive', 'p0.0001', 'patients', 'co-infected', 'parasites', 'lower', 'odds', 'developing', 'severe', 'covid-19', 'adjusted', 'odds', 'ratio', 'aor', '0.23', '95', 'ci', '0.17-0.30', 'p0.0001', 'parasites', 'aor', '0.37', '95', 'ci', '0.26-0.51', 'p0.0001', 'protozoa', 'aor', '0.26', '95', 'ci', '0.19-0.35', 'p0.0001', 'helminths', 'stratified', 'species', 'co-infection', 'entamoeba', 'spp', 'hymenolepis', 'nana', 'schistosoma', 'mansoni', 'trichuris', 'trichiura', 'implied', 'lower', 'probability', 'developing', 'severe', 'covid-19', '11', 'deaths', '1.5', 'among', 'patients', 'without', 'parasites', 'p', '0.009', 'interpretation', 'parasite', 'co-infection', 'associated', 'reduced', 'risk', 'severe', 'covid-19', 'african', 'patients', 'parasite-driven', 'immunomodulatory', 'responses', 'may', 'mute', 'hyper-inflammation', 'associated', 'severe', 'covid-19', 'funding', 'european', 'developing', 'countries', 'clinical', 'trials', 'partnership', 'edctp', '-', 'european', 'union', 'joep', 'lange', 'institute', 'jli', 'netherlands', 'trial', 'registration', 'clinicaltrials.gov', 'nct04473365']\n",
      "\n",
      "Etiology of Colitis-Complex Diarrhea in Growing Pigs: A Review.\n",
      "['colitis-complex', 'diarrhea', 'ccd', 'pigs', 'defined', 'type', 'diarrhea', 'associated', 'colonic', 'inflammation', 'disrupted', 'colonic', 'gut', 'barrier', 'functionality', 'growing', 'pigs', '4-16', 'weeks', 'post-weaning', 'challenge', 'pig', 'industry', 'associated', 'high', 'use', 'antibiotics', 'reduced', 'animal', 'welfare', 'depressed', 'growth', 'rate', 'exact', 'etiology', 'ccd', 'still', 'unclear', 'however', 'pathogens', 'including', 'brachyspira', 'b', 'hyodysenteriae', 'b', 'pilosicoli', 'swine', 'whipworms', 'trichuris', 'suis', 'involved', 'specific', 'colitis', 'sc', 'absence', 'specific', 'pathogens', 'dietary', 'factors', 'high', 'levels', 'protein', 'pelleted', 'feedstuffs', 'lack', 'sufficient', 'antioxidants', 'result', 'non-specific', 'colitis', 'nsc', 'hand', 'supplement', 'polyunsaturated', 'fatty', 'acids', 'pufa', 'polyphenols', 'sufficient', 'supply', 'essential', 'amino', 'acids', 'e.g', 'threonine', 'cysteine', 'proline', 'short-chain', 'fatty', 'acids', 'scfa', 'especially', 'butyrate', 'resistant', 'starch', 'shown', 'confer', 'preventing/ameliorating', 'effects', 'ccd', 'different', 'putative', 'biomarkers', 'associated', 'ccd', 'presented', 'anticipated', 'comprehensive', 'picture', 'possible', 'causes', 'ccd', 'potential', 'dietary', 'interventions', 'could', 'cast', 'light', 'direction', 'future', 'studies', 'aimed', 'developing', 'preventive', 'curative', 'strategies', 'ccd', 'growing', 'pigs']\n",
      "\n",
      "Diversity and burden of helminthiasis in wild ruminants in Iran.\n",
      "['paper', 'aimed', 'investigate', 'diversity', 'burden', 'helminthiasis', 'ovis', 'orientalis', 'n', '26', 'capra', 'aegagrus', 'n', '29', 'gazella', 'subgutturosa', 'n', '24', 'grazed', '37', 'national', 'parks', '9', 'provinces', 'iran', 'organs', 'body', 'cavities', 'infected', 'helminths', 'included', 'gastrointestinal', 'tract', 'peritoneal', 'cavity', 'heart', 'liver', 'lungs', 'contents', 'extracted', 'washed', 'running', 'water', 'intestinal', 'lung-isolated', 'nematodes', 'cleared', 'lactophenol', 'subsequently', 'fixed', 'cestodes', 'stained', 'alum', 'carmine', 'mounted', 'en', 'face', 'berleses', 'fluid', 'slight', 'pressure', 'microscopic', 'slide', 'cover', 'slip', 'helminth', 'species', 'identified', 'study', 'include', 'intestinal', 'nematodes', 'marshallagia', 'marshalli', 'teladorsagia', 'circumcincta', 'ostertagia', 'ostertagi', 'nematodirus', 'oiratianus', 'nematodirella', 'longispiculata', 'skrjabinema', 'ovis', 'trichuris', 'ovis', 'trichuris', 'discolor', 'parabronema', 'skrjabini', 'lungworms', 'protostrongylus', 'rufescens', 'cystocaulus', 'ocreatus', 'adult', 'cestodes', 'moniezia', 'expansa', 'helicometra', 'giardi', 'avitellina', 'centripunctata', 'stilesia', 'globipunctata', 'metacestodes', 'cysticercus', 'spp', 'hydatid', 'cyst', 'cysticercus', 'tenuicollis', 'proportion', 'different', 'helminth', 'species', 'ranged', 'low', 'moderate', '3.45-46.15', 'intensity', 'helminth', 'isolation', 'different', 'ruminants', 'ranged', '2', '20', 'taxa', 'identified', 'study', 'reported', 'wild', 'animal', 'species', 'around', 'world', 'presence', 'cysticercus', 'spp', 'cardiac', 'involvement', 'g', 'subgutturosa', 'helminths', 'c', 'aegagrus', 'reported', 'first', 'time', 'iran', 'significant', 'reduction', 'observed', 'worm', 'burden', 'compared', 'previous', 'studies', 'iran', 'indicating', 'changes', 'wildlife', 'host-parasite', 'systems', 'linked', 'many', 'reasons', 'including', 'climate', 'changes', 'public', 'health', 'policies', 'e.g', 'strategic', 'anthelmintic', 'use', 'domestic', 'ruminants', 'anthropogenic', 'factors', 'environmental', 'changes', 'e.g', 'urbanization', 'agricultural', 'expansion', 'physical', 'barriers', 'well', 'vegetation', 'growth', 'host', 'availability']\n",
      "\n",
      "Occurrence of Endoparasites in Adult Swedish Dogs: A Coprological Investigation.\n",
      "['occurrence', 'endoparasites', 'swedish', 'adult', 'dogs', 'n', '303', 'investigated', 'january', 'october', '2014', 'included', 'dogs', 'clinically', 'healthy', 'older', '1', 'year', 'untreated', 'anthelmintics', 'endectocides', 'least', '3', 'months', 'prior', 'sampling', 'grouped', 'according', 'age', 'category', 'dog', 'time', 'since', 'last', 'antiparasitic', 'treatment', 'samples', 'analyzed', 'flotation', 'detect', 'parasitic', 'eggs', 'cysts/oocysts', 'among', '129', '43', 'dogs', 'also', 'analyzed', 'baermann-technique', 'detect', 'cardiopulmonary', 'larval', 'stages', 'parasite', 'dispersal', 'stages', 'found', '24', '7.9', 'ci', '95', '4.9-10.1', 'dogs', 'flotation', 'dog', 'shed', 'cardiopulmonary', 'larval', 'stages', 'giardia', 'sp', 'cysts', 'observed', '2.6', 'n', '8', 'dogs', 'examined', 'cysts', 'sarcocystis', 'spp', 'observed', '0.6', 'n', '2', 'oocysts', 'cystosisopora', 'ohioensis', 'found', 'one', 'dog', '0.3', 'eggs', 'toxocara', 'canis', '2.3', 'n', '7', 'uncinaria', 'stenocephala', '1.3', 'n', '4', 'trichuris', 'vulpis', '0.3', 'one', 'dog', 'found', 'none', 'dogs', 'diagnosed', 'one', 'species', 'although', 'occurrence', 'endoparasites', 'average', 'dogs', '≤', '2', 'years', 'age', '11.5', 'nematodes', 'common', 'older', 'dogs', '≥4', 'years', '77.0', 'although', 'occurrence', 'lower', 'working/exhibition', 'dogs', '5.9', 'companion', 'dogs', '8.4', 'hunting-dogs', '8.6', 'differences', 'significant', 'however', 'dogs', 'exposed', 'prey', 'according', 'owner', 'statistically', 'significant', 'higher', 'prevalence', 'dogs', '20.5', 'vs', '5.7', 'odds', 'ratio', '4.0', 'ci', '95', '1.58-10.11', 'dogs', 'access', 'prey', '2.4', 'ci', '95', '0.37-8.06', 'dogs', 'staying', 'day-care', '2', 'ci', '95', '0.96-5.96', 'bitches', 'furthermore', 'significant', 'association', 'observed', 'infection', 'nematodes', 'exposures', 'prey', 'p', '0.006', 'reference', 'data', 'endoparasites', 'canine', 'fecal', 'samples', 'submitted', 'national', 'veterinary', 'institute', 'sva', 'uppsala', '2014', 'presented', 'overall', 'study', 'shows', 'low', 'occurrence', 'endoparasites', 'among', 'dogs', 'sweden', 'risk-assessment', 'zoonotic', 'parasites', 'well', 'deworming', 'recommendations', 'take', 'advantage', 'updated', 'figures']\n",
      "\n",
      "First isolation of Trichuris from wild blue sheep (Pseudois nayaur) in the Helan Mountains, China.\n",
      "['four', 'adult', 'female', 'worms', 'trichuris', 'isolated', 'individual', 'wild', 'blue', 'sheep', 'pseudois', 'nayaur', 'inhabiting', 'helan', 'mountains', 'china', 'epidemiological', 'survey', 'wild', 'ruminant', 'although', 'differences', 'among', 'worms', 'posterior', 'end', 'rectum', 'morphology', 'egg', 'shape', 'little', 'information', 'regarding', 'species', 'status', 'could', 'inferred', 'morphology', 'phylogenetic', 'trees', 'constructed', 'based', 'sequences', 'its1', 'segment', 'ribosomal', 'rna', 'rrna', 'sequences', 'four', 'trichuris', 'specimens', 'wild', 'blue', 'sheep', 'divided', 'two', 'distinct', 'lineages', 'clade', 'clade', 'b', 'two', 'specimens', 'clade', 'named', 'genotype', 'closest', 'relationship', 'trichuris', 'skrjabini', 'two', 'specimens', 'clade', 'b', 'named', 'genotype', 'ii', 'closest', 'genetic', 'relationship', 'previously', 'described', 'trichuris', 'sp', 'two', 'trichuris', 'genotypes', 'identified', 'present', 'study', '18s', 'fragments', '261', '262', 'bp', 'newly', 'obtained', 'sequences', 'found', 'highly', 'conserved', 'merely', 'one', 'insert', 'mutation', 'single', 'nucleotide', 'present', 'genetic', 'distance', 'based', 'its1', 'members', 'clade', 'composed', 'two', 'skrjabini', 'individuals', 'two', 'genotype', 'individuals', 'ranged', '0', '0.0034', 'distances', 'within', 'intraspecies', 'variation', 'trichuris', '0-0.0272', 'suggesting', 'genotype', 'individuals', 'infesting', 'wild', 'blue', 'sheep', 'skrjabini', 'clade', 'b', 'newly', 'obtained', 'sequences', 'clustered', 'trichuris', 'sp', 'specimens', 'isolated', 'ruminants', 'sheep', 'black', 'goat', 'strong', 'support', 'genetic', 'distance', 'ranged', '0.0068', '0.017', 'also', 'within', 'intraspecies', 'variation', 'trichuris', '0-0.0272', 'however', 'genetic', 'distances', 'clade', 'clade', 'b', '0.0442', '0.0578', 'higher', 'intraspecies', 'distances', 'trichuris', 'lower', 'interspecies', 'distances', '0.102-0.5078', 'results', 'implied', 'clade', 'clade', 'b', 'likely', 'represent', 'two', 'subpopulations', 'skrjabini', 'however', 'possibility', 'clade', 'skrjabini', 'clade', 'b', 'candidatus', 'trichuris', 'could', 'excluded']\n",
      "\n",
      "Case report: Control of intestinal nematodes in captive Chlorocebus sabaeus.\n",
      "['limited', 'data', 'efficacy', 'antiparasitic', 'treatments', 'husbandry', 'methods', 'control', 'nematode', 'infections', 'captive', 'populations', 'african', 'green', 'monkeys', 'agms', 'chlorocebus', 'sabaeus', 'faecal', 'egg', 'count', 'fec', 'tests', '10', '11', '91', 'adult', 'male', 'agms', 'captured', 'large', 'feral', 'population', 'island', 'st', 'kitts', 'evidence', 'nematode', 'infections', 'mostly', 'capillaria', '8/11', '73', 'trichuris', 'trichiura', '7/11', '64', 'strongylid', 'species', '7/11', '64', 'specifically', 'hookworm', 'trichostrongylus', '50/50', 'also', 'strongyloides', 'fuelleborni', '1/11', '9', 'kept', 'individual', 'cages', 'cleaning', 'feeding', 'regimens', 'prevent', 'reinfections', 'treated', 'concurrently', 'ivermectin', '300', 'µg/kg', 'given', 'subcutaneously', 'albendazole', '10', 'mg/kg', 'given', 'orally', 'daily', '3', 'days', '60', '6/10', 'agms', 'negative', 'follow-up', 'fec', '3', 'months', 'fec', 'necropsy', 'end', 'study', '5-8', 'months', 'later', 'one', 'monkey', 'appeared', 'reinfected', 'trichiura', 'negative', 'fec', '3', 'months', 'post-treatment', 'four', 'agms', 'positive', 'trichiura', '3', 'month', 'fec', 'follow-up', 'negative', 'end', 'study', 'one', 'treatment', 'regimen', 'although', 'initially', 'cleared', 'capillaria', 'following', 'treatment', 'three', 'agms', 'found', 'infected', 'end', 'study', 'ivermectin', 'albendazole', 'treatment', 'regimen', 'coupled', 'good', 'husbandry', 'practices', 'prevent', 'reinfections', 'effectively', 'controlled', 'nematode', 'infections', 'captive', 'agms']\n",
      "\n",
      "Immunoregulatory molecules secreted by Trichuris muris.\n",
      "['trichuris', 'whipworm', 'nematode', 'infections', 'prevalent', 'humans', 'domestic', 'livestock', 'mammals', 'share', 'epithelial', 'dwelling', 'niche', 'similar', 'life', 'cycle', 'chronic', 'infections', 'follow', 'implying', 'immune', 'evasion', 'mechanisms', 'operating', 'nematode', 'excretory', 'secretory', 'es', 'products', 'shown', 'rich', 'source', 'immunomodulatory', 'molecules', 'many', 'species', 'trichuris', 'muris', 'model', 'natural', 'parasite', 'mice', 'used', 'extensively', 'study', 'host–parasite', 'interactions', 'provides', 'tractable', 'platform', 'investigation', 'immunoregulatory', 'capacity', 'whipworm', 'es', 'present', 'review', 'details', 'progress', 'identification', 'composition', 'muris', 'es', 'immunomodulatory', 'components', 'potential', 'mechanisms', 'action', 'adult', 'muris', 'secretome', 'dominated', 'one', 'protein', 'modulatory', 'capacity', 'although', 'remains', 'completely', 'characterized', 'addition', 'secretome', 'contains', 'multiple', 'proteins', 'small', 'molecules', 'immunomodulatory', 'potential', 'certainly', 'comparison', 'trichuris', 'species', 'moreover', 'muris-derived', 'exosomes/exosome-like', 'vesicles', 'contain', 'protein', 'multiple', 'mirnas', 'providing', 'alternate', 'delivery', 'process', 'molecules', 'potential', 'modulate', 'host', 'immunity']\n",
      "\n",
      "The prevalence of intestinal nematodes among red foxes (Vulpes vulpes) in north-western Poland.\n",
      "['red', 'fox', 'vulpes', 'vulpes', 'widely', 'distributed', 'northern', 'hemisphere', 'australia', 'presence', 'nematode-infected', 'foxes', 'urbanized', 'areas', 'increases', 'risk', 'transmission', 'nematodes', 'domestic', 'dogs', 'thus', 'humans', 'aim', 'study', 'determine', 'prevalence', 'species', 'composition', 'intestinal', 'nematodiasis', 'red', 'foxes', 'western', 'pomerania', 'province', 'north-western', 'poland', 'intestinal', 'contents', '620', 'red', 'foxes', 'killed', 'government', 'reduction', 'shooting', 'programme', 'examined', 'adult', 'nematodes', 'using', 'sedimentation', 'counting', 'technique', 'sct', 'intestinal', 'nematodes', 'including', 'toxocara', 'canis', 'toxascaris', 'leonina', 'uncinaria', 'stenocephala', 'trichuris', 'vulpis', 'found', '77.3', '95', 'ci', '73.8-80.4', 'examined', 'foxes', 'mean', 'infection', 'burden', '20.1', 'nematode', 'per', 'animal', 'male', 'female', 'foxes', 'similar', 'infection', 'burdens', 'nematodes', 'present', 'high', 'prevalence', 'intensity', 'among', 'foxes', 'north-western', 'poland', 'furthermore', 'high', 'prevalence', 'nematodes', 'foxes', 'may', 'likely', 'constitute', 'health', 'risk', 'humans', 'domestic', 'animals', 'due', 'increasing', 'fox', 'densities', 'urban', 'periurban', 'areas']\n",
      "\n",
      "Prevalence of intestinal parasites in dogs from public shelters in Serbia.\n",
      "['data', 'endoparasitic', 'infections', 'dogs', 'dog', 'shelters', 'southeastern', 'europe', 'limited', 'thus', 'study', 'aimed', 'add', 'existing', 'knowledge', 'topic', 'reporting', 'prevalence', 'intestinal', 'parasites', 'dogs', 'public', 'dog', 'shelters', 'republic', 'serbia', '2017', '2018', 'individual', 'pooled', 'fecal', 'samples', 'collected', '1267', 'dogs', 'six', 'shelters', 'samples', 'qualitatively', 'examined', 'parasites', 'using', 'flotation', 'tests', 'seven', 'taxa', 'intestinal', 'parasites', 'identified', 'cystoisospora', 'spp', 'ascarids', 'toxocara', 'canis', 'toxascaris', 'leonina', 'hookworms', 'trichuris', 'vulpis', 'taeniids', 'dipylidium', 'caninum', 'overall', 'prevalence', 'intestinal', 'parasites', '58', '3', '78', '1', 'young', 'dogs', '53.1', 'adult', 'dogs', 'parasites', 'detected', 'young', '1', 'year', 'old', 'adult', 'dogs', '1', 'year', 'old', 'cystoisospora', 'spp', '20', '4.9', 'canis', '33.5', '14.7', 'leonina', '7.7', '2.3', 'hookworms', '16.9', '15', 'respectively', 'however', 'vulpis', '9.6', 'taeniids', '1.3', 'caninum', '5.4', 'detected', 'adult', 'dogs', 'belgrade', 'shelter', 'young', 'dogs', 'higher', 'prevalence', 'endoparasitic', 'infections', '18.9', '49/260', 'adult', 'dogs', '14.8', '149/1007', 'subotica', 'jagodina', 'niš', 'shelters', 'young', 'dogs', 'significantly', 'higher', 'p', '0.001', 'p', '0.05', 'respectively', 'prevalence', 'endoparasitic', 'infections', '10', '12.3', '14.6', 'adult', 'dogs', '5.3', '8', '7.2', 'results', 'useful', 'establishing', 'health', 'care', 'programs', 'dog', 'shelters', 'implementing', 'effective', 'strategies', 'control', 'intestinal', 'parasites']\n",
      "\n",
      "Lungworms (Metastrongylus spp.) and intestinal parasitic stages of two separated Swiss wild boar populations north and south of the Alps: Similar parasite spectrum with regional idiosyncrasies.\n",
      "['metastrongylus', 'sp', 'lungworm', 'worldwide', 'distribution', 'wild', 'boars', 'suids', 'switzerland', 'two', 'wild', 'boar', 'populations', 'geographically', 'divided', 'alps', 'investigated', '84', 'wild', 'boars', '52', 'north', '32', 'south', 'alps', 'different', 'sex', 'age', 'juveniles', 'subadults', 'adults', 'shot', 'september', 'december', '2018', 'lungs', 'macroscopically', 'examined', 'dissected', 'detection', 'metastrongylus', 'specimens', 'additionally', 'faecal', 'samples', 'obtained', '55', 'animals', 'analysed', 'sedimentation/flotation', 'mini-flotac®', 'method', 'overall', '12774', 'metastrongylus', 'sp', 'specimens', 'isolated', 'prevalence', '77.4', 'mean', 'burden', '196.5', 'range', '1-2589', 'significant', 'differences', 'north', '80.8', '218.0', 'south', '71.9', '157.4', 'sexes', 'age', 'groups', 'macroscopically', 'dense', 'nodular', 'lesions', 'associated', 'metastrongylus', 'sp', 'present', '19', '65', '33.9', 'positive', 'lungs', 'five', 'metastrongylus', 'sp', 'detected', 'pudendotectus', '67.9', 'salmi', '63.1', 'confusus', '56', 'apri', '44', 'asymmetricus', '17.9', 'significant', 'difference', 'p', '0.012', 'north', '32.7', 'south', '62.5', 'apri', 'lungworm', 'population', 'female', 'biased', 'number', 'metastrongylus', 'sp', 'eggs', 'faecal', 'samples', 'correlate', 'worm', 'burdens', 'furthermore', 'following', 'endoparasites', 'detected', 'isospora', 'suis/eimeria', 'sp', '74.5', 'strongyloides', 'suis', '27.3', 'trichuris', 'suis', '20.0', 'hyostrongylus', 'rubidus/oesophagostomum', 'sp', '18.2', 'globocephalus', 'sp', '9.1', 'capillaria', 'sp', '7.3', 'ascaris', 'suum', '3.6', 'giardia', 'sp', '3.6', 'balantidium', 'coli', '1.8', 'significant', 'differences', 'suis', 'north', '36.1', 'south', '10.5', 'globocephalus', 'sp', 'south', '26.3', 'although', 'geographically', 'separated', 'swiss', 'wild', 'boar', 'populations', 'share', 'similar', 'parasite', 'spectra', 'also', 'showing', 'regional', 'idiosyncrasies', 'partially', 'explained', 'ecological', 'climatic', 'factors', 'despite', 'clinical', 'relevance', 'unknown', 'accurate', 'knowledge', 'concerning', 'distribution', 'endoparasites', 'wildlife', 'reservoir', 'relevant', 'better', 'understand', 'risk', 'factors', 'domestic', 'pig', 'population']\n",
      "\n",
      "A 3-year retrospective analysis of canine intestinal parasites: fecal testing positivity by age, U.S. geographical region and reason for veterinary visit.\n",
      "['canine', 'life', 'stage', 'key', 'factor', 'parasite', 'prevalence', 'clinical', 'signs', 'associated', 'parasitism', 'common', 'pups', 'adult', 'dogs', 'health', 'status', 'geographical', 'region', 'may', 'also', 'play', 'role', 'parasite', 'prevalence', 'purpose', 'study', 'evaluate', 'fecal', 'test', 'results', 'using', 'zinc', 'sulfate', 'flotation', 'centrifugation', 'combined', 'fecal', 'antigen', 'testing', 'hookworms', 'ancylostoma', 'spp', 'uncinaria', 'stenocephala', 'ascarids', 'toxocara', 'canis', 'toxascaris', 'spp', 'baylisascaris', 'spp', 'whipworms', 'trichuris', 'vulpis', 'sorted', 'age', 'geographical', 'region', 'veterinary', 'visit', 'type', 'retrospective', 'sample', 'intestinal', 'parasite', 'panels', 'submitted', 'idexx', 'laboratories', '1,626,104', 'individual', 'dogs', 'selected', 'continental', 'usa', '1', 'january', '2017', '31', 'december', '2019', 'data', 'contain', 'results', 'fecal', 'exams', 'performed', 'using', 'zinc', 'sulfate', 'flotation', 'centrifugation', 'paired', 'coproantigen', 'immunoassay', 'results', 'hookworms', 'ascarids', 'whipworms', 'giardia', 'fecal', 'dx®', 'giardia', 'coproantigen', 'immunoassay', 'plate', 'paired', 'testing', 'either', 'coproantigen', 'assay', 'flotation', 'test', 'positive', 'sample', 'considered', 'positive', 'data', 'summarized', 'age', 'category', 'u.s', 'census', 'bureau', 'geographical', 'region', 'northeast', 'south', 'midwest', 'west', 'veterinary', 'visit', 'type', 'visit', 'types', 'subdivided', 'wellness', 'visits', 'clinical', 'visits', 'fecal', 'sample', 'submitted', 'dogs', 'presenting', 'either', 'wellness', 'visits', 'clinical', 'visits', 'giardia', 'testing', 'included', 'giardia', 'highest', 'positivity', 'combined', 'results', 'microscopy', 'coproantigen', '12.2', '10.8', 'respectively', 'followed', 'hookworms', 'combined', 'microscopy', 'coproantigen', '4.1', '4.2', 'respectively', 'ascarids', 'combined', 'microscopy', 'coproantigen', '2.5', '1.7', 'respectively', 'whipworms', 'combined', 'microscopy', 'coproantigen', '1.1', '1.4', 'respectively', 'test', 'results', 'pooled', 'together', 'pups', 'aged', '2-6', 'months', 'observed', 'highest', 'proportion', 'positive', 'results', 'either', 'microscopy', 'coproantigen', 'immunoassay', 'regardless', 'clinical', 'visit', 'type', 'parasite', 'positivity', 'varied', 'geographical', 'region', 'regardless', 'visit', 'type', 'age', 'geographical', 'region', 'coproantigen', 'method', 'observed', 'find', 'higher', 'proportion', 'positive', 'test', 'results', 'microscopy', 'giardia', 'ascarids', 'hookworms', 'whipworms', 'fecal', 'dx®', 'coproantigen', 'immunoassay', 'combined', 'zinc', 'sulfate', 'flotation', 'centrifugation', 'method', 'uncovers', 'higher', 'number', 'positive', 'hookworm', 'ascarid', 'whipworm', 'infections', 'zinc', 'sulfate', 'flotation', 'alone', 'pups', 'adult', 'dogs', 'across', 'geographical', 'regions', 'usa', 'regardless', 'visit', 'type']\n",
      "\n",
      "Detection of heartworm antigen without cross-reactivity to helminths and protozoa following heat treatment of canine serum.\n",
      "['detection', 'dirofilaria', 'immitis', 'heartworm', 'antigen', 'sera', 'primary', 'means', 'diagnosing', 'infections', 'dogs', 'recent', 'years', 'practice', 'heat-treating', 'serum', 'prior', 'antigen', 'testing', 'demonstrated', 'improved', 'detection', 'heartworm', 'infection', 'practice', 'heat-treating', 'serum', 'resulted', 'earlier', 'detection', 'improved', 'sensitivity', 'heartworm', 'infections', 'suggested', 'heat', 'treatment', 'may', 'cause', 'cross', 'reactivity', 'reconditum', 'intestinal', 'helminth', 'infections', 'dogs', 'studies', 'assessed', 'potential', 'cross-reactivity', 'parasites', 'heartworm', 'tests', 'heat', 'treatment', 'using', 'blood', 'products', 'appropriate', 'gold', 'standard', 'reference', 'canine', 'sera', 'n163', 'used', 'evaluate', 'heartworm', 'antigen-elisa', 'dirochek®', 'potential', 'cross-reactivity', 'common', 'parasitic', 'infections', 'heartworm', 'status', 'additional', 'parasite', 'infections', 'confirmed', 'necropsy', 'adult', 'helminth', 'species', 'verified', 'morphologically', 'pcr', 'feces', 'evaluated', 'centrifugal', 'fecal', 'flotation', 'intestinal', 'parasites', 'confirmed', '140', 'dogs', 'necropsy', '130', 'fecal', 'flotation', 'acanthocheilonema', 'reconditum', 'microfilariae', 'confirmed', '22', 'dogs', 'prevalence', 'heartworm', 'infection', 'confirmed', 'necropsy', '35.6', '58/163', '105', 'dogs', 'without', 'heartworms', 'specificity', 'remained', 'unchanged', '100', 'heat', 'treatment', 'despite', 'confirmed', 'infections', 'reconditum', 'ancylostoma', 'caninum', 'ancylostoma', 'brasiliense', 'trichuris', 'vulpis', 'toxocara', 'canis', 'dipylidium', 'caninum', 'spirometra', 'mansonoides', 'macracanthorynchus', 'ingens', 'cystoisospora', 'sp', 'giardia', 'sp', 'sarcocystis', 'sp', 'findings', 'suggest', 'use', 'heat', 'treatment', 'improves', 'sensitivity', 'heartworm', 'tests', 'unlikely', 'cause', 'false', 'positive', 'antigen', 'results', 'due', 'acanthocheilonema', 'reconditum', 'intestinal', 'helminths', 'protozoal', 'parasites', 'dogs']\n",
      "\n",
      "High prevalence of Clonorchis sinensis infection in Guangxi, Southern China.\n",
      "['soil-transmitted', 'helminths', 'sths', 'hookworm', 'roundworm', 'whipworm', 'food-borne', 'trematodiases', 'including', 'clonorchis', 'sinensis', 'remain', 'public', 'health', 'problem', 'worldwide', 'especially', 'tropical', 'subtropical', 'regions', 'aimed', 'determine', 'current', 'prevalence', 'parasites', 'guangxi', 'china', 'located', 'subtropical', 'region', 'cross-sectional', 'study', '4-year', 'longitudinal', 'surveillance', 'study', 'carried', 'stool', 'samples', 'collected', 'examined', 'microscopically', 'parasite', 'eggs', 'using', 'modified', 'kato-katz', 'thick', 'smear', 'method', 'study', 'subjects', 'selected', 'using', 'stratified', 'random', 'cluster', 'sampling', 'cross-sectional', 'study', 'longitudinal', 'surveillance', 'study', 'numbered', '15,683', '24,429', 'respectively', 'cross-sectional', 'study', 'hookworm', 'roundworm', 'whipworm', 'pinworm', 'c', 'sinensis', 'tapeworm', 'found', 'total', 'prevalence', 'soil-transmitted', 'helminths', 'sths', '6.4', '95', 'ci', '6.0-6.8', 'prevalences', 'c', 'sinensis', 'hookworm', 'roundworm', 'whipworm', 'pinworm', '10.6', '4.2', '0.3', '0.3', '1.8', 'respectively', 'prevalence', 'c', 'sinensis', 'males', '14.0', '95', 'ci', '13.3-14.8', 'significantly', 'higher', 'females', '7.2', '95', 'ci', '6.7-7.8', 'p', '0.0001', 'prevalence', 'also', 'significantly', 'higher', 'medical', 'worker', 'group', '20.8', '95', 'ci', '12.9-28.7', 'occupational', 'groups', '10.5', '95', 'ci', '10.0-11.0', 'p', '0.0001', 'prevalence', 'hookworm', 'females', '5.3', '95', 'ci', '4.8-5.8', 'significantly', 'higher', 'males', '3.0', '95', 'ci', '2.6-3.3', 'p', '0.0001', 'longitudinal', 'surveillance', 'study', 'prevalence', 'c', 'sinensis', 'sths', '2016', '2017', '2018', '2019', '12.0', '6.0', '11.0', '10.0', '2.6', '2.8', '1.5', '1.5', 'respectively', 'adult', 'male', 'occupation', 'medical', 'workers', 'risk', 'factors', 'infection', 'c', 'sinensis', 'hookworm', 'prevalence', 'rate', 'c', 'sinensis', 'remains', 'high', 'sths', 'decreasing', 'suggesting', 'enhanced', 'health', 'education', 'focused', 'c', 'sinensis', 'guangxi']\n",
      "\n",
      "Evaluation of Commercially Available Anthelminthics in Laboratory Models of Human Intestinal Nematode Infections.\n",
      "['drug', 'repurposing', 'veterinary', 'human', 'medicine', 'main', 'strategy', 'develop', 'four', 'recommended', 'human', 'anthelminthics', 'albendazole', 'mebendazole', 'levamisole', 'pyrantel', 'pamoate', 'treatment', 'soil-transmitted', 'helminthiasis', 'systematic', 'head-to-head', 'comparison', 'anthelminthic', 'activity', 'profile', 'derivatives', 'drugs', 'anthelminthics', 'developed', 'succession', 'conducted', 'date', 'studied', 'eight', 'benzimidazoles', 'five', 'macrocyclic', 'lactones', 'tribendimidine', 'levamisole', 'pyrantel', 'pamoate', 'laboratory', 'models', 'human', 'intestinal', 'nematode', 'infections', 'vitro', 'studies', 'performed', 'trichuris', 'muris', 'l1', 'larval', 'stage', 'adults', 'well', 'ancylostoma', 'ceylanicum', 'necator', 'americanus', 'heligmosomoides', 'polygyrus', 'strongyloides', 'ratti', 'l3', 'larvae', 'adults', 'benzimidazoles', 'showed', 'pronounced', 'differences', 'larval', 'adult', 'stages', 'low', 'activity', 'larvae', 'highest', 'activity', 'observed', 'adult', 'n.', 'americanus', 'ic50', 'flubendazole', '1.1', 'μm', 'macrocyclic', 'lactones', 'hand', 'revealed', 'higher', 'activity', 'larval', 'stages', 'lowest', 'ic50', 'values', 'observed', 'n.', 'americanus', 'l3', 'ic50', 'values', '0.03-3', 'μm', 'vivo', 'studies', 'performed', 't.', 'muris', 'h.', 'polygyrus', 'mice', 'models', 'moxidectin', 'milbemycin', 'oxime', 'showing', 'highest', 'activity', 'h.', 'polygyrus', 'ed50', 'values', '0.009', '0.006', 'mg/kg', 'respectively', 'moxidectin', 'abamectin', 'effective', 'drugs', 't.', 'muris', 'ed50', 'values', '0.2', '0.5', 'mg/kg', 'respectively', 'laboratory', 'models', 'soil-transmitted', 'helminthiasis', 'assist', 'characterizing', 'potential', 'drug', 'candidates', 'drugs', 'evaluated', 'different', 'species', 'adult', 'larval', 'stages', 'activities', 'could', 'differ', 'considerably']\n",
      "\n",
      "Gastrointestinal parasite infection intensity and hematological parameters in South African communal indigenous goats in relation to anemia.\n",
      "['study', 'conducted', 'determine', 'intensity', 'gastrointestinal', 'parasite', 'gip', 'infections', 'hematological', 'parameters', 'south', 'african', 'communal', 'indigenous', 'goats', 'relation', 'anemia', 'total', '288', 'goats', 'randomly', 'sampled', 'areas', 'representing', 'four', 'agro-ecological', 'zones', 'fecal', 'blood', 'samples', 'collected', 'rectum', 'jugular', 'vein', 'respectively', 'animal', 'number', 'eggs', 'per', 'gram', 'epg', 'oocysts', 'per', 'gram', 'opg', 'feces', 'hematological', 'parameters', 'determined', 'using', 'modified', 'mcmaster', 'technique', 'bc-2800vet®', 'automatic', 'hematology', 'analyzer', 'respectively', 'data', 'analyzed', 'using', 'repeated', 'measures', 'techniques', 'minitab', '17', 'modeling', 'covariance', 'structure', 'observed', 'data', 'based', 'epg', 'opg', 'goats', 'humid', 'zone', 'significantly', 'infected', 'p0.05', 'strongyles', 'eimeria', 'moniezia', 'trichuris', 'spp', 'hematological', 'parameters', 'goats', 'arid', 'humid', 'zone', 'lower', 'p0.05', 'semi-arid', 'dry', 'sub-humid', 'zone', 'gip', 'infection', 'intensities', 'higher', 'p0.05', 'young', 'animals', 'adult', 'suckling', 'goats', 'gip', 'infection', 'intensity', 'similar', 'goat', 'sexes', 'hematological', 'parameters', 'higher', 'p0.05', 'females', 'higher', 'p0.05', 'infection', 'intensities', 'strongyles', '302.90', 'epg', 'eimeria', '216.09', 'epg', 'observed', 'winter', 'compared', 'summer', 'strongyles', '302.90', 'eimeria', '216.09', 'epg', 'higher', 'p0.05', 'values', 'hematological', 'parameters', 'observed', 'summer', 'compared', 'winter', 'gip', 'infection', 'intensity', 'winter', 'could', 'associated', 'hypochromic', 'normocytic', 'anemia', 'likely', 'affects', 'suckling', 'goats', 'summer', 'could', 'associated', 'normochromic', 'normocytic', 'anemia', 'likely', 'affect', 'young', 'goats']\n",
      "\n",
      "A school-based soil-transmitted helminths survey in the Guadalcanal Province, the Solomon Islands.\n",
      "['infections', 'soil-transmitted', 'helminths', 'major', 'public', 'health', 'problem', 'worldwide', 'especially', 'among', 'schoolchildren', 'low-income', 'countries', 'little', 'information', 'described', 'prevalence', 'solomon', 'islands', '2017', '2018', 'school-based', 'soil-transmitted', 'helminths', 'survey', 'guadalcanal', 'province', 'conducted', 'total', '454', 'schoolchildren', 'selected', 'merthiolate-iodine-formaldehyde', 'concentration', 'stain', 'used', 'prevalence', '17', 'one', 'parasites', 'including', 'hookworm', '8.8', 'strongyloides', 'stercoralis', '5.7', 'ascaris', 'lumbricoides', '4.2', 'trichuris', 'trichiura', '3.5', 'sth', 'infection', 'significantly', 'correlated', 'parents', 'occupations', 'hand', 'washing', 'shoe', 'wearing', 'well', 'gastrointestinal', 'symptoms', 'prevent', 'sth', 'transmission', 'schoolchildren', 'solomon', 'islands', 'completely', 'combined', 'preventive', 'strategies', 'seem', 'necessary']\n",
      "\n",
      "Enteric pathogens in German police officers after predominantly tropical deployments - A retrospective assessment over 5 years.\n",
      "['study', 'performed', 'assess', 'infection', 'risk', 'german', 'police', 'officers', 'predominantly', 'tropical', 'deployments', 'mostly', 'united', 'nations', 'missions', 'gastrointestinal', 'pathogens', 'police', 'officers', 'offered', 'pcr-based', 'screening', 'gastrointestinal', 'pathogens', 'deployment', 'screening', 'panel', 'comprised', 'enteroinvasive', 'bacteria', 'salmonella', 'spp', 'shigella', 'spp./enteroinvasive', 'escherichia', 'coli', 'campylobacter', 'jejuni', 'yersinia', 'spp', 'enteropathogenic', 'protozoa', 'entamoeba', 'histolytica', 'giardia', 'duodenalis', 'cryptosporidium', 'spp', 'cyclospora', 'cayetanensis', 'well', 'enteric', 'helminths', 'ancyclostoma', 'spp', 'ascaris', 'lumbricoides', 'enterobius', 'vermicularis', 'hymenolepis', 'nana', 'necator', 'americanus', 'african', 'schistosoma', 'spp', 'strongyloides', 'stercoralis', 'taenia', 'saginata', 'taenia', 'solium', 'trichuris', 'trichiura', 'g', 'duodenalis', 'n', '3', 'c', 'jejuni', 'n', '2', 'salmonella', 'spp', 'n', '1', 'shigella', 'spp./enteroinvasive', 'e', 'coli', 'n', '3', 'stercoralis', 'n', '3', 'detect', '12', '133', '9.0', 'police', 'officers', 'majority', 'shown', 'gastrointestinal', 'symptoms', 'deployment', 'asymptomatic', 'time', 'medical', 'assessment', 'major', 'infection', 'sites', 'sub-saharan', 'africa', 'followed', 'northern', 'africa', 'middle', 'east', 'deployment', 'police', 'officers', 'tropical', 'deployment', 'sites', 'united', 'nations', 'missions', 'associated', 'considerable', 'acquisition', 'risk', 'gastrointestinal', 'pathogens', 'quantitatively', 'relevant', 'minority', 'post-deployment', 'screening', 'advisable', 'facilitate', 'therapeutic', 'hygiene-related', 'consequences']\n",
      "\n",
      "Importation of cats and risk of parasite spread: a Caribbean perspective and case study from St Kitts.\n",
      "['recent', 'years', 'international', 'travel', 'cats', 'increased', 'distribution', 'cat', 'parasites', 'change', 'movement', 'already', 'subtropical', 'tropical', 'parasites', 'reported', 'veterinarians', 'areas', 'naturally', 'present', 'understanding', 'prevalence', 'tropical', 'subtropical', 'parasites', 'caribbean', 'islands', 'risk', 'importation', 'temperate', 'areas', 'could', 'enable', 'improved', 'prevention', 'recommendations', 'border', 'control', 'import', 'requirements', 'present', 'study', 'focused', 'cat', 'owning', 'students', 'enrolled', 'doctor', 'veterinary', 'medicine', 'dvm', 'programme', 'st', 'kitts', 'owners', 'interviewed', 'cats', 'use', 'parasiticides', 'cats', 'examined', 'trichuris', 'felis', 'platynosomum', 'fastosum', 'using', 'sugar', 'flotation', 'lynxacarus', 'radovskyi', 'using', 'adhesive', 'tape', 'test', 'dirofilaria', 'immitis', 'using', 'commercial', 'antigen', 'antibody', 'tests', 'data', '115', 'cats', 'owned', '87', 'dvm', 'students', 'collected', '90', 'cats', 'expected', 'travel', 'usa', 'examined', 'cats', 'adults', 'born', 'st', 'kitts', 'prevalence', 'reported', '6.8', '95', 'confidence', 'interval', 'ci', '2.2-15.1', 'felis', '16.2', '95', 'ci', '8.7-26.6', 'p', 'fastosum', '6.8', '95', 'ci', '2.5-14.3', 'l', 'radovskyi', 'immitis', 'tests', 'negative', 'dvm', 'students', 'reported', 'high', 'level', 'deworming', '83.3', 'cats', 'number', 'cats', 'treated', 'per', 'recommendations', 'low', '56.1', 'endoparasites', '70.8', 'ectoparasites', 'also', 'lack', 'clarity', 'regarding', 'purpose', 'treatments', 'used', 'treatments', 'appear', 'targeted', 'parasites', 'present', 'results', 'indicate', 'low', 'prevalence', 'parasites', 'interest', 'dvm', 'student', 'cat', 'population', 'compared', 'prevalence', 'studies', 'caribbean', 'however', 'degree', 'non-compliance', 'parasiticide', 'uses', 'high', 'number', 'cats', 'traveling', 'usa', 'indicate', 'medium', 'risk', 'importation', 'tropical', 'subtropical', 'cat', 'parasites', 'temperate', 'areas', 'recommend', 'stronger', 'health', 'inspections', 'health', 'screening', 'requirements', 'borders', 'including', 'development', 'specific', 'parasiticide', 'protocols', 'cat', 'importation']\n",
      "\n",
      "Prevalence and risk factors of helminths' infection of dogs in three towns of west Shoa zone, Oromia regional state, Ethiopia.\n",
      "['dogs', 'common', 'companion', 'animals', 'worldwide', 'among', 'main', 'reservoirs', 'carriers', 'transmitters', 'many', 'infectious', 'parasitic', 'diseases', 'cross-sectional', 'study', 'conducted', 'ambo', 'bako', 'gojo', 'towns', 'west', 'shoa', 'zone', 'january', '2015', 'june', '2017', 'objectives', 'estimating', 'prevalence', 'associated', 'risk', 'factors', 'gastrointestinal', 'helminths', 'dogs', 'chi-square', 'logistic', 'regression', 'analyses', 'used', 'data', 'analysis', 'p-value', '0.05', 'considered', 'significant', '310', 'dogs', 'sampled', 'subjected', 'faecal', 'examination', 'using', 'flotation', 'sedimentation', 'methods', '158', '50.97', '95', 'confidence', 'interval', 'ci', '45.26-56.66', 'dogs', 'positive', 'helminths', 'infection', 'study', 'identified', 'ancylostoma', 'caninum', '36.8', 'toxocara', 'canis', '9.7', 'uncinaria', 'spp', '4.5', 'physaloptera', 'canis', '4.5', 'salminicola', 'canis', '3.22', 'oncicola', 'canis', '1.9', 'spirocerca', 'lupi', '0.3', 'leonina', '1.0', 'trichuris', 'vulpis', '0.97', 'diphyllobothrium', '1.29', 'taenid', 'spp', '0.3', 'mesocestoides', 'spp', '0.3', '243', 'male', '67', 'female', 'dogs', 'examined', '123', 'males', '50.6', '35', 'females', '52.2', 'positive', 'one', 'gastrointestinal', 'helminths', 'significant', 'difference', 'p', '0.05', 'overall', 'prevalence', 'helminth', 'infections', 'sexes', 'age', 'breed', 'district', 'management', 'dogs', 'total', 'positive', 'dogs', '123', '39.7', 'single', 'infection', '36', '11.6', 'dogs', 'mixed', 'infection', 'odds', 'acquiring', 'canis', '4.88', 'times', 'higher', 'dogs', 'gojo', 'p', '0.004', 'compared', 'bako', 'town', 'probability', 'acquiring', 'canis', 'infection', '4.49', 'times', 'higher', 'juvenile', 'dogs', 'p', '0.012', 'compared', 'adult', 'dogs', 'prevalence', 'gastrointestinal', 'helminths', 'dogs', 'ambo', 'bako', 'gojo', 'towns', 'high', 'diversity', 'helminth', 'parasites', 'detected', 'together', 'zoonotic', 'importance', 'calls', 'need', 'regular', 'deworming', 'training', 'dog', 'owners', 'create', 'awareness', 'transmission', 'clinical', 'signs', 'prevention', 'control', 'helminth', 'parasites']\n",
      "\n",
      "Prevalence of Enteroparasites Among Non-Saudis in Bahrah, Saudi Arabia.\n",
      "['background', 'enteroparasitic', 'infections', 'tropical', 'subtropical', 'regions', 'world', 'among', 'common', 'diseases', 'majority', 'cases', 'may', 'show', 'symptoms', 'however', 'many', 'untreated', 'cases', 'may', 'experience', 'severe', 'complications', 'recent', 'substantial', 'economic', 'development', 'saudi', 'arabia', 'resulted', 'inflow', 'millions', 'workers', 'intestinal', 'parasitic', 'infection', 'highly', 'endemic', 'countries', 'mainly', 'asia', 'africa', 'objective', 'cross-sectional', 'study', 'aimed', 'assess', 'first', 'time', 'prevalence', 'associated', 'factors', 'intestinal', 'parasitic', 'infestation', 'among', 'non-saudi', 'residents', 'bahrah', 'western', 'region', 'saudi', 'arabia', 'materials', 'methods', 'total', '355', 'stool', 'samples', 'collected', 'participants', 'included', 'study', 'several', 'examinations', 'intestinal', 'parasites', 'addition', 'questionnaires', 'including', 'personal', 'data', 'sociodemographic', 'data', 'personal', 'hygiene', 'health', 'habits', 'factors', 'used', 'results', 'prevalence', 'intestinal', 'parasitic', 'infections', 'among', 'non-saudi', 'workers', 'present', 'study', '22.3', 'prevalence', 'protozoan', 'infection', 'higher', 'helminth', 'infection', 'workers', 'asian', 'countries', 'prevalent', 'trichuris', 'trichiura', 'blastocystis', 'hominis', 'endolimax', 'nana', 'ascaris', 'lumbricoides', 'single', 'intestinal', 'infections', 'among', '86', 'infected', 'cases', 'main', 'significant', 'factors', 'associated', 'intestinal', 'parasitic', 'infections', 'personal', 'hygiene', 'practices', 'proper', 'handwashing', 'meals', 'using', 'toilet', 'source', 'drinking', 'water', 'type', 'living', 'accommodation', 'conclusion', 'intestinal', 'parasites', 'slightly', 'prevalent', 'among', 'non-saudi', 'workers', 'bahrah', 'need', 'public', 'health', 'awareness', 'programs', 'prevent', 'spreading', 'infections']\n",
      "\n",
      "The Prevalence and Degree of Endoparasitic Infections in Wild Boars Using the Semi-quantitative Fecal Egg Count Method.\n",
      "['breeding', 'wild', 'boars', 'significant', 'part', 'hunting', 'economy', 'however', 'hogs', 'associated', 'zoonotic', 'infection', 'study', 'assessed', 'prevalence', 'degree', 'parasitic', 'infections', 'exist', 'wild', 'boars', 'two', 'hunting', 'grounds', 'autonomous', 'province', 'vojvodina', 'republic', 'serbia', 'parasitological', 'examinations', 'conducted', '2016', '2019', 'total', '220', 'fecal', 'samples', '13', 'lungs', 'collected', 'wild', 'boars', 'two', 'hunting', 'grounds', 'open', 'closed', 'habitat', 'territory', 'vojvodina', 'serbia', 'assessment', 'prevalence', 'degree', 'detected', 'endoparasitosis', 'involved', 'semi-quantitative', 'fecal', 'egg', 'count', 'method', 'presence', 'protozoa-eimeria', 'spp./isospora', 'spp', '76.38', '32.26', 'balantidium', 'coli', '7.08', 'nematodes-ascaris', 'suum', '29.03', 'trichuris', 'suis', '31.49', '19.35', 'hyostrongylus', 'rubidus/oesophagostomum', 'spp', '55.12', '48.39', 'metastrongylus', 'pudendotectus', '66.14', '21.51', 'gnathostoma', 'hispidum', '3.94', '2.15', 'macracanthorhynchus', 'hirudinaceus', '9.45', '7.53', 'trematodes-fasciola', 'hepatica', '5.51', '4.30', 'dicrocoelium', 'dendriticum', '0.78', '2.30', 'detected', 'single', 'mixed', 'infections', 'via', 'qualitative', 'coprological', 'examination', 'total', 'prevalence', 'endoparasitosis', '92.91', 'hunting', 'ground', 'closed', 'habitat', '73.12', 'hunting', 'ground', 'ii', 'open', 'habitat', 'prevalent', 'infection', 'hunting', 'ground', 'coccidiosis', '76.38', 'hyostrongylosis/oesophagostomosis', '48.39', 'hunting', 'ground', 'ii', 'adult', 'forms', 'pudendotectus', 'identified', 'lungs', '13', 'wild', 'hogs', 'mild', 'severe', 'bronchopneumonia', 'hunting', 'ground', 'ii', 'semi-quantitative', 'fecal', 'egg', 'count', 'method', 'demonstrated', 'clinical', 'parasitological', 'significance', 'revealed', 'risks', 'associated', 'zoonotic', 'infections', 'game', 'species', 'population', 'therefore', 'monitoring', 'etiology', 'epizootiology', 'parasitic', 'infections', 'wild', 'boars', 'essential', 'creating', 'health', 'care', 'programs', 'hunting', 'ground', 'areas', 'planning', 'control', 'strategies', 'protect', 'hunting', 'economy', 'public', 'health']\n",
      "\n",
      "Development of caecaloids to study host-pathogen interactions: new insights into immunoregulatory functions of Trichuris muris extracellular vesicles in the caecum.\n",
      "['caecum', 'intestinal', 'appendage', 'junction', 'small', 'large', 'intestines', 'displays', 'unique', 'epithelium', 'serves', 'exclusive', 'niche', 'range', 'pathogens', 'including', 'whipworms', 'trichuris', 'spp.', 'protocols', 'grow', 'organoids', 'small', 'intestine', 'enteroids', 'colon', 'colonoids', 'exist', 'conditions', 'culture', 'organoids', 'caecum', 'yet', 'described', 'report', 'methods', 'grow', 'differentiate', 'characterise', 'mouse', 'adult', 'stem', 'cell-derived', 'caecal', 'organoids', 'termed', 'caecaloids', 'compare', 'cellular', 'composition', 'caecaloids', 'enteroids', 'identifying', 'differences', 'intestinal', 'epithelial', 'cell', 'populations', 'mimic', 'found', 'caecum', 'small', 'intestine', 'remarkable', 'similarity', 'intestinal', 'epithelial', 'cell', 'composition', 'spatial', 'conformation', 'caecaloids', 'tissue', 'origin', 'enables', 'use', 'vitro', 'model', 'study', 'host', 'interactions', 'important', 'caecal', 'pathogens', 'thus', 'exploiting', 'system', 'investigated', 'responses', 'caecal', 'intestinal', 'epithelial', 'cells', 'extracellular', 'vesicles', 'secreted/excreted', 'intracellular', 'helminth', 'trichuris', 'muris', 'findings', 'reveal', 'novel', 'immunoregulatory', 'effects', 'whipworm', 'extracellular', 'vesicles', 'caecal', 'epithelium', 'including', 'downregulation', 'responses', 'nucleic', 'acid', 'recognition', 'type-i', 'interferon', 'signalling']\n",
      "\n",
      "Safety of viable embryonated eggs of the whipworm Trichuris suis as a novel food pursuant to Regulation (EU) 2015/2283.\n",
      "['following', 'request', 'european', 'commission', 'efsa', 'panel', 'nutrition', 'novel', 'foods', 'food', 'allergens', 'nda', 'asked', 'deliver', 'opinion', 'viable', 'embryonated', 'eggs', 'whipworm', 'trichuris', 'suis', 'novel', 'food', 'nf', 'pursuant', 'regulation', 'eu', '2015/2283', 'applicant', 'proposes', 'use', 'nf', 'food', 'supplement', 'format', '15-ml', 'bottle', 'containing', '250', 'viable', 'embryonated', 'eggs', 't.', 'suis', 'target', 'population', 'nf', 'general', 'population', 'considering', 'compositional', 'data', 'proposed', 'conditions', 'use', 'consumption', 'nf', 'considered', 'nutritional', 'relevance', 'available', 'data', 'suggest', 'larvae', 't.', 'suis', 'hatching', 'intestinal', 'tract', 'humans', 'remain', 'immature', 'live', 'several', 'weeks', 'gastrointestinal', 'tract', 'human', 'host', 'nevertheless', 'certain', 'circumstances', 't.', 'suis', 'invasive', 'human', 'able', 'mature', 'adult', 'size', 'reproduce', 'humans', 'human', 'studies', 'also', 'shown', 'administration', 't.', 'suis', 'ova', 'may', 'increase', 'incidence', 'adverse', 'gastrointestinal', 'reactions', 'panel', 'considers', 'studies', 'available', 'demonstrate', 'safety', 'nf', 'intended', 'general', 'population', 'proposed', 'intake', '250', 'viable', 'embryonated', 'eggs', 't.', 'suis', 'ova', 'per', 'day', 'based', 'available', 'information', 'panel', 'cannot', 'establish', 'safe', 'dose', 'safety', 'concerns', 'would', 'expected', 'panel', 'concludes', 'safety', 'nf', 'established']\n",
      "\n",
      "Anaemia in asymptomatic parasite carriers living in urban, rural and peri-urban settings of Gabon.\n",
      "['cross-sectional', 'study', 'carried', 'different', 'settlements', 'gabon', 'determine', 'influence', 'single', 'multiple', 'parasite', 'carriage', 'haemoglobin', 'hb', 'levels', 'april', '2015', 'june', '2016', 'healthy', 'volunteers', 'urban', 'peri-urban', 'rural', 'areas', 'screened', 'malaria', 'blood', 'filariasis', 'intestinal', 'parasitic', 'infections', 'using', 'microscopic', 'methods', 'hb', 'concentration', 'measured', 'hemocue', 'analyser', 'association', 'parasite', 'carriage', 'anaemia', 'assessed', 'among', '775', 'volunteers', 'examined', '319', '41.2', 'rural', 'villages', '76.0', 'adults', 'filariasis', 'intestinal', 'parasitic', 'infections', 'plasmodium', 'falciparum', 'polyparasitism', 'detected', '15.6', '14.6', '9.5', '6.8', 'participants', 'respectively', 'anaemia', 'prevalence', '72.6', 'rates', 'mild', 'moderate', 'severe', 'anaemia', '30.9', '61.1', '8.0', 'respectively', 'median', 'hb', 'level', 'lowest', 'presence', 'hookworms', '7.1', 'g/dl', 'interquartile', 'range', 'iqr', '6.8-7.5', 'schistosoma', 'intercalatum', '6.9', 'g/dl', 'trichuris', 'trichiura', '10.1', 'g/dl', 'iqr', '8.9-11.5', 'plasmodium', 'falciparum', '10.0', 'g/dl', 'iqr', '9.1-11.2', 'compared', 'filariaemia', '12.1', 'g/dl', 'iqr', '10.5-13.2', 'p0.03', 'moderate', 'severe', 'anaemia', 'predominated', 'among', 'single-infected', 'p', 'falciparum', '69.5', 'co-infected', 'intestinal', 'parasitic', 'infections', 'p', 'falciparum', '76.2', 'found', '23.2', 'individuals', 'filariasis', 'participants', 'soil-transmitted', 'helminths', 'half', 'blastocystis', 'sp', '68.8', 'infection', 'moderate', 'anaemia', 'prevalence', 'anaemia', 'high', 'asymptomatic', 'parasite', 'carriage', 'associated', 'anaemia', 'surveyed', 'population', 'gabon']\n",
      "\n",
      "Preliminary Study on the Prevalence of Endoparasite Infections and Vector-borne Diseases in Outdoor Dogs in Bulgaria.\n",
      "['present', 'work', 'designed', 'evaluate', 'prevalence', 'gastrointestinal', 'parasites', 'vector-borne', 'pathogens', 'dogs', 'bulgaria', 'total', '172', 'owned', 'dogs', 'keeping', 'outside', 'included', 'study', 'fecal', 'samples', 'examined', 'using', 'standard', 'flotation', 'sedimentation', 'methods', 'blood', 'samples', 'processed', 'knotts', 'technique', 'snap™', '4dx', 'plus', 'test', 'idexx', 'angio', 'detect™', 'test', 'idexx', 'overall', 'prevalence', 'gastrointestinal', 'parasites', '64.5', 'eggs', 'hookworms', 'ancylostoma', 'sp', 'uncinaria', 'sp', 'frequently', 'detected', '54.1', 'followed', 'trichuris', 'vulpis', '15.1', 'capillaria', 'sp', '11.0', 'toxocara', 'canis', '6.4', 'cystoisospora', 'sp', '4.1', 'sarcocystis', 'sp', '2.3', 'toxascaris', 'leonina', '1.7', 'taenia', 'sp', '1.2', 'linguatula', 'serrata', '0.6', 'addition', 'hookworms', 'commonly', 'involved', 'cases', 'single', 'infection', '20.3', 'combinations', 'capillaria', 'sp./hookworms', 'vulpis/hookworms', 'common', 'co-infections', '4.1', '2.9', 'respectively', 'blood', 'samples', 'revealed', 'presence', 'antibodies', 'ehrlichia', 'sp', '13.4', 'anaplasma', 'sp', '13.4', 'borrelia', 'burgdorferi', '1.7', 'antigens', 'dirofilaria', 'immitis', 'angiostrongylus', 'vasorum', 'detected', '10.5', '0.6', 'samples', 'tested', 'respectively', 'microfilariae', 'dirofilaria', 'repens', 'found', '5.8', 'blood', 'samples', 'additionally', 'prevalence', 'immitis', 'ehrlichia', 'sp', 'significantly', 'higher', 'adult', 'young', 'dogs', 'p0.05', 'contrast', 'gender', 'considered', 'risk', 'factor', 'contributing', 'occurrence', 'infections']\n",
      "\n",
      "Capillaria boehmi (syn. Eucoleus boehmi): Challenging treatment of a rarely diagnosed nasal nematode in dogs and high prevalence in Swiss foxes.\n",
      "['despite', 'morphological', 'differences', 'eggs', 'adults', 'capillaria', 'boehmi', 'infections', 'occasionally', 'misdiagnosed', 'c', 'aerophila', 'infections', 'past', 'capillaria', 'boehmi', 'found', 'nasal', 'paranasal', 'sinuses', 'wild', 'canids', 'dogs', 'may', 'suffer', 'nasal', 'discharge', 'sneezing', 'epistaxis', 'importantly', 'scent', 'impaired', 'study', 'present', 'three', 'challenging', 'cases', 'nasal', 'capillariosis', 'dogs', 'report', 'review', 'variable', 'success', 'anthelmintic', 'treatments', 'investigate', 'c', 'boehmi', 'prevalence', 'swiss', 'red', 'foxes', 'considered', 'potential', 'wild', 'life', 'reservoir', 'two', 'females', 'one', 'male', 'dog', 'scent', 'hounds', 'aged', '3-9', 'years', 'weighing', '19-31', 'kg', 'two', 'dogs', 'previously', 'coproscopically', 'misdiagnosed', 'trichuris', 'infections', 'two', 'dogs', 'showed', 'clinical', 'signs', 'sneezing', 'coughing', 'impaired', 'scent', 'one', 'dog', 'adult', 'living', 'c', 'boehmi', 'obtained', 'nasal', 'lavage', 'identity', 'worms', 'eggs', 'three', 'dogs', 'genetically', 'confirmed', '18s', 'rrna', '100', 'identity', '578', 'base', 'pairs', 'dogs', '1-3', 'followed-up', 'overall', '54', '8', '67', 'months', 'respectively', 'dogs', 'repeatedly', 'excreted', 'c', 'boehmi', 'eggs', 'faecal', 'samples', 'despite', 'treatments', 'following', 'compounds', 'various', 'dosage', 'retreatment', 'protocols', 'fenbendazole', 'milbemycin', 'oxime', 'orally', 'moxidectin/imidacloprid/', 'spot-on', 'levamisole', 'intramuscularly', 'different', 'anthelmintic', 'compounds', 'showed', 'variable', 'success', 'regarding', 'effect', 'clinical', 'outcome', 'stopping', 'egg', 'excretion', 'reinfections', 'due', 'contaminated', 'environment', 'could', 'fully', 'excluded', 'winter', '2016', '2017', '218', 'foxes', 'canton', 'zurich', 'switzerland', 'examined', 'tissues', 'nasal', 'paranasal', 'sinuses', 'investigated', 'adult', 'capillaria', 'specimens', 'eggs', 'describe', 'first', 'time', 'c', 'boehmi', 'infections', 'switzerland', 'observing', 'high', 'prevalence', '190/218', '87.2', 'overall', '107', '126', 'adults', '84.9', '95', 'confidence', 'interval', 'ci', '77.5-90.7', '83', '92', 'youngsters', '90.2', 'ci', '82.2-95.4', 'infected', 'presence', 'c', 'boehmi', 'correlate', 'age', 'p', '0.209', 'correlated', 'significantly', 'sex', 'male', 'foxes', '102', '107', '95.3', 'ci', '89.4-98.5', 'significantly', 'p', '0.001', 'often', 'infected', 'females', '88', '111', '79.3', 'ci', '70.5-86.4', 'worm', 'burden', 'ranged', '1', '72', 'adult', 'specimens', 'geometric', 'mean', '5.7', 'conclusion', 'c', 'boehmi', 'infections', 'mis-', 'and/or', 'underdiagnosed', 'dogs', 'appropriate', 'anthelmintic', 'treatments', 'preventing', 'coprophagia', 'egg', 'contamination', 'surroundings', 'performing', 'coproscopic', 'controls', 'treatments', 'fundamental', 'aspects', 'potentially', 'nasal', 'washing', 'may', 'represent', 'auxiliary', 'alternative', 'however', 'successful', 'elimination', 'c', 'boehmi', 'infections', 'dogs', 'remains', 'challenging']\n",
      "\n",
      "Parasitological Monitoring of European Bison (Bison Bonasus) from Three Forests of North-eastern Poland between 2014 and 2016.\n",
      "['common', 'parasites', 'european', 'bison', 'include', 'gastro-intestinal', 'pulmonary', 'nematodes', 'liver', 'flukes', 'fasciola', 'hepatica', 'tapeworms', 'protozoa', 'genus', 'coccidia', 'study', 'compared', 'extensiveness', 'intensities', 'european', 'bison', 'parasitic', 'invasions', 'three', 'north-eastern', 'polish', 'forests', 'different', 'seasons', 'queried', 'role', 'parasitological', 'monitoring', 'sanitary', 'hygienic', 'control', 'feeding', 'places', 'faecal', 'samples', 'collected', 'białowieża', 'knyszyńska', 'borecka', 'forests', '2014', '2016', 'area', 'neighbouring', 'białowieża', 'forest', 'outside', 'natura', '2000', 'protected', 'area', 'parasites', 'detected', 'individual', 'samples', 'flotation', 'decanting', 'baermann', 'methods', 'eggs', 'trichostrongylidae', 'aonchotheca', 'sp', 'nematodirus', 'sp', 'strongyloides', 'spp', 'trichuris', 'sp', 'moniezia', 'spp', 'fasciola', 'hepatica', 'larvae', 'dictyocaulus', 'viviparus', 'oocytes', 'eimeria', 'spp', 'identified', 'significant', 'variation', 'invasion', 'intensity', 'diversity', 'seen', 'origin', 'season', 'relationships', 'assessed', 'first', 'univariable', 'tests', 'next', 'multivariately', 'origin', 'season', 'emerged', 'major', 'risk', 'factors', 'exposure', 'parasites', 'differences', 'level', 'parasitic', 'infection', 'forests', 'implications', 'sufficiency', 'cause', 'clinical', 'symptoms', 'however', 'associations', 'risk', 'factors', 'found', 'enable', 'necessary', 'preventive', 'measures', 'taken', 'protect', 'e', 'bison', 'exposure', 'decrease', 'risks', 'additionally', 'parasitological', 'monitoring', 'appropriate', 'method', 'sanitary', 'hygienic', 'control', 'european', 'bison', 'winter', 'feeding', 'places', 'threats', 'public', 'health', 'adventitious', 'invasions', 'zoonotic', 'factors', 'f', 'hepatica', 'identified']\n",
      "\n",
      "Diagnosis of Taeniosis in rural Venezuelan communities: Preliminary characterization of a Taenia solium specific monoclonal (VP-1) Coproantigen ELISA.\n",
      "['objective', 'study', 'identify', 'treat', 'carriers', 'adult', 'taenia', 'solium', 'present', 'two', 'rural', 'venezuelan', 'communities', 'examination', 'faecal', 'samples', 'coproscopical', 'analysis', 'application', 'polyclonal', 'monoclonal', 'vp-1', 'coproantigen', 'elisa', 'polyclonal', 'monoclonal', 'elisas', 'negative', 'tested', 'soluble', 'extracts', 'adults', 'ascaris', 'lumbricoides', 'hymenolepis', 'nana', 'trichuris', 'trichura', 'polyclonal', 'elisa', 'positive', 'soluble', 'extracts', 'adults', 'solium', 'saginata', 'whereas', 'monoclonal', 'elisa', 'recognizes', 'glycoprotein', 'restricted', 'solium', 'also', 'negative', 'faecal', 'samples', 'five', 'cases', 'saginata', 'adult', 'infections', 'first', 'community', 'studied', 'potrero', 'largo', 'total', 'population', '300', '248', 'faecal', 'samples', 'examined', '2', 'individuals', 'positive', 'taenia', 'spp', 'eggs', 'coproscopical', 'analysis', 'vp-1', 'elisa', 'yielded', 'solium', 'adults', 'upon', 'purging', 'contrast', 'polyclonal', 'coproag', 'elisa', 'applied', '248', 'faecal', 'samples', 'considerable', 'number', 'positives', 'indeed', 'seven', 'patients', 'highly', 'positive', 'polyclonal', 'elisa', 'yield', 'taenia', 'spp', 'upon', 'purging', 'negative', 'vp-1', 'elisa', 'second', 'community', 'studied', 'la', 'yuca', 'total', 'population', '560', 'none', '333', 'individuals', 'donated', 'faeces', 'positive', 'taenia', 'spp', 'eggs', 'many', 'however', 'infected', 'range', 'intestinal', 'helminth', 'protozoan', 'parasites', 'total', '76', 'faecal', 'samples', 'representative', 'intestinal', 'parasite', 'tested', 'polyclonal', 'vp-1', 'assays', 'many', 'gave', 'unacceptable', 'number', 'significant', 'optical', 'densities', 'polyclonal', 'coproag', 'elisa', 'contrast', 'negative', 'vp-1', 'elisa', 'thus', 'providing', 'evidence', 'species', 'specificity', 'vp-1', 'elisa', 'faecal', 'samples', 'results', 'vp-1', 'coproag', 'elisa', 'although', 'preliminary', 'justify', 'validation', 'testing', 'faecal', 'samples', 'solium', 'saginata', 'adult', 'infected', 'individuals']\n",
      "\n",
      "The Distribution of Pathogenic Intestinal Parasites in Sivas Cumhuriyet University Faculty of Medicine Research and Application Hospital between 2006-2018\n",
      "['aim', 'study', 'determine', 'distribution', 'intestinal', 'parasites', 'patients', 'admitted', 'hospital', 'gastrointestinal', 'complaints', 'city', 'harboring', 'sociocultural', 'economic', 'changes', 'show', 'relationship', 'parasites', 'variables', 'age', 'sex', 'year', 'distribution', 'intestinal', 'parasites', 'patients', 'suffered', 'gastrointestinal', 'symptoms', 'referred', 'microbiology/parasitology', 'laboratory', 'various', 'clinics', 'sivas', 'cumhuriyet', 'university', 'training', 'research', 'hospital', 'january', '2006', 'december', '2018', 'determined', 'macroscopic', 'examination', '19,760', 'stool', 'specimens', 'examined', 'nativ-lugol', 'necessary', 'flotation', 'sedimentation', 'trichrome', 'modified', 'acid-fast', 'certest', 'combo', 'card', 'test', 'crypto', 'giardia', 'entamoeba', 'certest', 'biotec', 's.l', 'spain', 'methods', '5,814', 'cellophane', 'tape', 'samples', 'examined', 'direct', 'microscopy', 'results', 'evaluated', 'retrospectively', 'three', 'protozoa', 'six', 'helminth', 'species', 'identified', 'samples', 'studied', 'frequent', 'parasite', 'found', 'giardia', 'intestinalis', '6.9', 'n1.363', 'protozoa', 'enterobius', 'vermicularis', '10.8', 'n627', 'helminths', 'entamoeba', 'histolytica/dispar', '1.5', 'n289', 'cryptosporidium', 'parvum', '0.3', 'n53', 'ascaris', 'lumbricoides', '0.2', 'n41', 'trichuris', 'trichiura', '0.1', 'n23', 'hymenolepis', 'nana', '0.1', 'n21', 'taenia', 'saginata', '2.1', 'n299', 'dicrocoelium', 'dendriticum', '0.01', 'n1', 'among', 'intestinal', 'parasites', '2006-2018', 'decreases', 'soil-borne', 'parasitoses', 'observed', 'statistically', 'significant', 'decrease', 'annual', 'positive', 'case', 'rates', 'despite', 'development', 'infrastructure', 'parasitoses', 'transmitted', 'lack', 'sanitation/cleaning', 'still', 'important', 'province']\n",
      "\n",
      "Prevalence and determinants of gastrointestinal parasite infection in intensively managed pigs in Nsukka agricultural zone, Southeast, Nigeria.\n",
      "['gastrointestinal', 'parasite', 'gip', 'infection', 'pigs', 'constrains', 'swine', 'production', 'enhances', 'dissemination', 'zoonotic', 'parasites', 'especially', 'tropics', 'therefore', 'epidemiological', 'study', 'determine', 'prevalence', 'risk', 'factors', 'gip', 'infection', 'intensively', 'managed', 'pigs', 'nsukka', 'conducted', 'faecal', 'samples', '1400', 'pigs', 'randomly', 'collected', '40', 'farms', 'examined', 'gip', 'eggs', 'following', 'standard', 'protocol', 'data', 'involvement', 'pig', 'farmers', 'risk', 'practices', 'enhance', 'endoparasitic', 'infection', 'piggeries', 'obtained', 'using', 'structured', 'questionnaire', 'overall', 'prevalence', '80', '32/40', '28.6', '400/1400', 'recorded', 'farm', 'individual', 'pig', 'levels', 'respectively', 'prevalence', '25.3', '138/546', '30.7', '262/854', '30.4', '310/1020', '23.7', '90/380', 'obtained', 'male', 'female', 'young', '1', 'year', 'adult', '≥', '1', 'year', 'pigs', 'respectively', 'epidemiological', 'factors', 'sex', 'age', 'season', 'farm', 'location', 'flock', 'size', 'significantly', 'p', '0.05', 'associated', 'worm', 'infestations', 'worm', 'eggs', 'identified', 'prevalence', 'strongyles', '25.7', '360/1400', 'trichuris', '11.4', '160/1400', 'ascaris', '0.7', '10/1400', 'mixed', 'infections', 'strongyles', 'trichuris', '9.3', '130/1400', 'major', 'risk', 'factors', 'found', 'feeding', 'self-compounded', 'on-farm', 'feed', 'non-disinfection', 'pen', 'equipment', 'rearing', 'pigs', 'different', 'ages', 'together', 'infrequent', 'removal', 'dungs', 'early', 'weaning', 'less', '6', 'weeks', 'non-availability', 'routine', 'deworming', 'programme', 'overall', 'prevalence', 'farm', 'individual', 'pig', 'levels', 'high', 'involvement', 'farmers', 'risk', 'practices', 'massive', 'therefore', 'cost-effective', 'control', 'gip', 'infestations', 'pig', 'study', 'area', 'imperative', 'boost', 'pig', 'production', 'minimize', 'risk', 'transmission', 'zoonotic', 'parasites']\n",
      "\n",
      "Prevalence of gastrointestinal parasites in communal goats from different agro-ecological zones of South Africa.\n",
      "['longitudinal', 'study', 'conducted', 'assess', 'epidemiology', 'common', 'gastrointestinal', 'parasite', 'gip', 'infections', 'affecting', 'goats', 'south', 'africa', 'influenced', 'agro-ecological', 'zone', 'aez', 'sampling', 'season', 'age', 'sex', 'animals', 'total', '288', 'goats', '101', 'male', '187', 'female', 'randomly', 'sampled', 'winter', 'summer', 'areas', 'representing', 'four', 'aezs', 'arid', '80', 'semi-arid', '76', 'humid', '62', 'dry', 'sub-humid', '70', 'south', 'africa', 'fecal', 'samples', 'animal', 'collected', 'rectum', 'presence', 'gip', 'eggs', 'determined', 'using', 'modified', 'mcmaster', 'technique', 'sample', 'considered', 'positive', 'minimum', 'one', 'gip', 'egg', 'detected', 'microscope', 'fecal', 'cultures', 'prepared', 'infective', 'larvae', 'collected', 'identified', 'data', 'analyzed', 'minitab17', '2017', 'using', 'freq', 'procedure', 'association', 'independent', 'factors', 'prevalence', 'various', 'gips', 'evaluated', 'using', 'pearson', 'chi-square', 'test', 'p0.05', 'overall', 'prevalence', 'gip', 'present', 'study', '37.1', 'mean', 'prevalence', '30.0', '26.4', '31.1', '36.6', '59.6', 'eimeria', 'spp', 'trichuris', 'strongyloides', 'papillosus', 'moniezia', 'spp', 'strongyles', 'respectively', 'significant', 'p0.05', 'association', 'prevalence', 'strongyles', 'trichuris', 'moniezia', 'spp', 'aezs', 'whereas', 'insignificant', 'p0.05', 'association', 'observed', 'prevalence', 'eimeria', 'spp', 'papillosus', 'significant', 'p0.05', 'association', 'goat', 'age', 'prevalence', 'gips', 'observed', 'prevalence', 'higher', 'young', 'goats', 'followed', 'adults', 'suckling', 'goats', 'prevalence', 'various', 'gips', 'similar', 'male', 'female', 'goats', 'percentage', 'infection', 'eimeria', 'spp', 'trichuris', 'papillosus', 'strongyle', 'parasitic', 'infections', 'marginally', 'higher', 'males', 'females', 'whereas', 'moniezia', 'spp', 'higher', 'females', 'significant', 'p0.05', 'association', 'prevalence', 'eimeria', 'spp', 'sampling', 'season', 'observed', 'insignificant', 'p0.05', 'association', 'gips', 'sampling', 'season', 'prevalence', 'eimeria', 'spp', 'infection', 'higher', 'winter', '34.0', 'summer', '26.0', 'aezs', 'goat', 'age', 'important', 'risk', 'factors', 'influencing', 'gip', 'infections', 'south', 'african', 'communal', 'goats', 'epidemiological', 'parameters', 'important', 'outlining', 'effective', 'parasite', 'control', 'management', 'systems', 'gips', 'goats']\n",
      "\n",
      "Chronic whipworm infection exacerbates Schistosoma mansoni egg-induced hepatopathology in non-human primates.\n",
      "['schistosomiasis', 'continues', 'inflict', 'significant', 'morbidity', 'mortality', 'tropical', 'subtropical', 'regions', 'world', 'disease', 'endemicity', 'overlaps', 'transmission', 'parasitic', 'diseases', 'despite', 'ubiquity', 'polyparasitism', 'tropical', 'regions', 'particularly', 'rural', 'communities', 'little', 'known', 'impact', 'multiple', 'helminth', 'infections', 'disease', 'progression', 'pilot', 'study', 'describe', 'influence', 'chronic', 'trichuris', 'trichiura', 'infection', 'schistosoma', 'mansoni', 'egg-induced', 'hepatopathology', 'infected', 'baboons', 'baboons', 'without', 'underlying', 'whipworm', 'infection', 'challenged', 'mansoni', 'cercariae', 'establish', 'schistosomiasis', 'adult', 'mansoni', 'worms', 'recovered', 'perfusion', 'enumerated', 'hepatic', 'granulomas', 'quantified', 'via', 'light', 'microscopy', 'transcriptional', 'profiling', 'tissues', 'completed', 'using', 'rna', 'sequencing', 'technologies', 'co-infection', 'mansoni', 'trichiura', 'resulted', 'higher', 'female', 'schistosome', 'worm', 'burden', 'significantly', 'larger', 'liver', 'granuloma', 'sizes', 'systems', 'biology', 'analyses', 'peripheral', 'blood', 'mononuclear', 'cells', 'pbmc', 'revealed', 'pathways', 'associated', 'increased', 'liver', 'damage', 'co-infected', 'baboons', 'underlying', 'chronic', 'whipworm', 'infection', 'intensified', 'schistosome', 'egg-induced', 'liver', 'pathology', 'infected', 'baboons', 'rna-seq', 'analysis', 'provided', 'insight', 'pathways', 'associated', 'increased', 'liver', 'damage', 'corroborating', 'histological', 'findings']\n",
      "\n",
      "Typhlitis Associated With Natural Trichuris sp. Infection in Cats.\n",
      "['trichuris', 'spp', 'infections', 'cause', 'typhlitis', 'typhlocolitis', 'many', 'species', 'published', 'studies', 'pathology', 'cats', 'trichuris', 'sp', 'infection', 'cats', 'appears', 'rare', 'parts', 'world', 'frequent', 'tropical', 'subtropical', 'regions', 'purpose', 'study', 'describe', 'intestinal', 'lesions', 'associated', 'natural', 'trichuris', 'sp', 'infections', 'cats', 'st', 'kitts', 'west', 'indies', 'comprehensive', 'autopsies', 'histopathological', 'assessment', 'small', 'large', 'intestine', 'total', 'worm', 'counts', 'performed', 'cross-sectional', 'study', '30', 'consecutive', 'feline', 'mortalities', 'trichuris', 'found', '17', '30', '57', '95', 'confidence', 'interval', '39-74', 'study', 'cats', 'median', 'worm', 'count', '11', 'range', '1-170', 'indicating', 'cats', 'low-intensity', 'infection', 'trichuris', 'infection', 'associated', 'typhlitis', 'consistency', 'feces', 'body', 'condition', 'score', 'cats', 'examined', 'typhlitis', 'categorized', 'mild', '10/15', '67', 'less', 'frequently', 'moderate', '2/15', '13', 'marked', '3/15', '20', 'inflammatory', 'infiltrate', 'varied', 'predominantly', 'eosinophilic', '5/15', '33', 'neutrophilic', '4/15', '27', 'mixture', 'eosinophilic', 'neutrophilic', '2/15', '13', 'mixture', 'neutrophilic', 'lymphoplasmacytic', '1/15', '7', 'mixture', 'eosinophilic', 'neutrophilic', 'lymphoplasmacytic', '3/15', '20', 'cats', 'surface', 'erosions', 'catarrhal', 'exudate', 'adjacent', 'adult', 'worms', 'findings', 'similar', 'reported', 'low-intensity', 'trichuris', 'infections', 'species']\n",
      "\n",
      "Noninvasive measurement of mucosal immunity in a free-ranging baboon population.\n",
      "['ecoimmunological', 'patterns', 'processes', 'remain', 'understudied', 'wild', 'primates', 'part', 'lack', 'noninvasive', 'methods', 'measure', 'immunity', 'secretory', 'immunoglobulin', 'siga', 'abundant', 'antibody', 'present', 'mammalian', 'mucosal', 'surfaces', 'provides', 'important', 'first', 'line', 'defense', 'pathogens', 'recent', 'studies', 'show', 'siga', 'measured', 'noninvasively', 'feces', 'good', 'marker', 'mucosal', 'immunity', 'validated', 'commercial', 'elisa', 'kit', 'measure', 'fecal', 'iga', 'baboons', 'tested', 'robustness', 'results', 'variation', 'collection', 'storage', 'conditions', 'developed', 'cost-effective', 'in-house', 'elisa', 'baboon', 'fecal', 'iga', 'using', 'data', 'custom', 'elisa', 'assessed', 'relationship', 'fecal', 'iga', 'concentrations', 'gastrointestinal', 'parasite', 'burden', 'tested', 'sex', 'age', 'reproductive', 'effort', 'predict', 'fecal', 'iga', 'wild', 'baboons', 'find', 'iga', 'concentrations', 'measured', 'baboon', 'feces', 'using', 'in-house', 'elisa', 'highly', 'correlated', 'values', 'obtained', 'commercial', 'kit', 'fecal', 'iga', 'concentrations', 'stable', 'extracts', 'stored', '22', 'months', '-20°c', 'fecal', 'iga', 'concentrations', 'negatively', 'correlated', 'parasite', 'egg', 'counts', 'trichuris', 'trichiura', 'parasite', 'richness', 'fecal', 'iga', 'vary', 'sexes', 'males', 'concentrations', 'higher', 'adults', 'versus', 'adolescents', 'lactating', 'females', 'significantly', 'lower', 'fecal', 'iga', 'pregnant', 'females', 'neither', 'pregnant', 'lactating', 'female', 'concentrations', 'differed', 'significantly', 'cycling', 'females', 'males', 'engaged', 'mate-guarding', 'exhibited', 'similar', 'iga', 'concentrations', 'engaged', 'little', 'mate-guarding', 'patterns', 'may', 'reflect', 'low', 'energetic', 'costs', 'mucosal', 'immunity', 'complex', 'dependence', 'iga', 'excretion', 'individual', 'condition', 'adding', 'noninvasive', 'measure', 'mucosal', 'immunity', 'promote', 'better', 'understanding', 'ecology', 'modulates', 'possible', 'tradeoffs', 'immune', 'system', 'energetically', 'costly', 'processes', 'wild']\n",
      "\n",
      "Molecular characterization of Trichuris spp. from captive animals based on mitochondrial markers.\n",
      "['monoxenous', 'parasites', 'may', 'easily', 'infect', 'animals', 'captivity', 'nematodes', 'belonging', 'genus', 'trichuris', 'commonly', 'reported', 'zoological', 'gardens', 'worldwide', 'infections', 'captive', 'animals', 'accurately', 'monitored', 'characterization', 'pathogens', 'highly', 'advisable', 'tool', 'infer', 'possible', 'routes', 'intra-', 'interspecific', 'transmission', 'pathways', 'assess', 'related', 'zoonotic', 'potential', 'whipworms', 'usually', 'identified', 'basis', 'morphological', 'features', 'adults', 'males', 'eggs', 'host-affiliation', 'criterion', 'given', 'strong', 'morphological', 'convergence', 'adaptive', 'traits', 'possible', 'occurrence', 'hybridization', 'and/or', 'cross-infections', 'events', 'use', 'molecular', 'methods', 'great', 'utility', 'analysed', 'two', 'partial', 'mitochondrial', 'loci', 'cytochrome', 'c', 'oxidase', 'cytochrome', 'b', 'regions', 'trichuris', 'spp', 'infecting', 'four', 'animal', 'species', 'hosted', 'bioparco', 'zoological', 'garden', 'rome', 'results', 'molecular', 'systematics', 'compared', 'previous', 'data', 'suggested', 'five', 'trichuris', 'taxa', 'recovered', 'well', 'separated', 'showing', 'significant', 'degree', 'host', 'affiliation', 'herbivorous', 'primates/swine', 'rodents/canids', 'screw', 'horn', 'antelopes', 'camels', 'infected', 'two', 'variants', 'trichuris', 'ovis', 'trichuris', 'sp', 'similar', 'observed', 'rodents', 'south', 'america', 'infecting', 'patagonian', 'maras', 'moreover', 'trichuris', 'ring-tailed', 'lemur', 'showed', 'great', 'similarity', 'trichuris', 'infecting', 'japanese', 'macaque', 'previously', 'analysed', 'zoological', 'garden', 'clustering', 'together', 'trichuris', 'trichiura', 'posing', 'potential', 'zoonotic', 'threat', 'visitors', 'workers']\n",
      "\n",
      "Retrospective survey of parasitism identified in feces of client-owned cats in North America from 2007 through 2018.\n",
      "['ownership', 'domestic', 'cats', 'north', 'america', 'increase', 'however', 'surveys', 'conducted', 'prevalence', 'parasitism', 'client-owned', 'cats', 'years', 'study', 'objective', 'evaluate', 'parasite', 'prevalence', 'statistical', 'analysis', 'fecal', 'examination', 'results', 'client-owned', 'cats', 'samples', 'submitted', 'veterinary', 'parasitology', 'diagnostic', 'laboratory', 'oklahoma', 'state', 'university', '12-year', 'period', 'results', 'centrifugal', 'flotation', 'saline', 'direct', 'smear', 'sedimentation', 'baermann', 'examinations', 'fecal', 'samples', 'submitted', 'boren', 'veterinary', 'medical', 'hospital', 'oklahoma', 'animal', 'disease', 'diagnostic', 'laboratory', 'oklahoma', 'state', 'university', '2007', '2018', 'included', 'impacts', 'sex', 'age', 'seasonality', 'prevalence', 'infection', 'also', 'analyzed', 'total', '2586', 'client-owned', 'cat', 'cases', 'included', 'study', 'parasites', 'eggs', 'oocysts', 'larvae', 'cysts', 'detected', 'majority', 'cases', '75.5', '1,953/2586', 'approximately', '18.8', '485/2586', 'client-owned', 'cats', 'infected', 'one', 'parasite', '5.7', '148/2586', 'cats', 'infected', 'multiple', 'parasites', 'common', 'parasite', 'stage', 'observed', 'cystoisospora', 'oocysts', '9.4', '243/2586', 'followed', 'toxocara', 'cati', 'eggs', '7.8', '202/2586', 'giardia', 'cysts', '4.0', '104/2586', 'alaria', 'eggs', '3.5', '91/2586', 'ancylostoma', 'eggs', '1.2', '32/2586', 'taeniid', 'proglottids/eggs', '1.2', '30/2586', 'dipylidium', 'caninum', 'proglottids/egg', 'packets', '1.1', '29/2586', 'eucoleus', 'aerophilus', 'eggs', '0.7', '18/2586', 'less', 'commonly', 'physalopetra', 'eggs', '0.19', '5/2586', 'toxascaris', 'leonina', 'eggs', '0.19', '5/2586', 'tritrichomonas', 'blagburni', 'trophozoites', '0.15', '4/2586', 'ollulanus', 'tricuspis', 'larvae/adults', '0.12', '3/2586', 'platynosomum', 'fastosum', 'eggs', '0.12', '3/2586', 'aelurostrongylus', 'abstrusus', 'larvae', '0.08', '2/2323', 'sarcocystis', 'sporocysts', '0.08', '2/2586', 'spirometra', 'eggs', '0.08', '2/2586', 'mesocestoides', 'proglottids/eggs', '0.08', '2/2586', 'trichuris', 'felis', 'eggs', '0.08', '2/2586', 'cryptosporidium', 'oocysts', '0.04', '1/2586', 'toxoplasma-like', 'small', 'coccidian', 'oocysts', '0.04', '1/2586', 'detected', 'additionally', 'fecal', 'examinations', 'revealed', 'ectoparasites', 'demodex', 'mites', '0.9', '24/2586', 'cheyletiella', 'mites', '0.15', '4/2586', 'otodectes', 'cynotis', 'mites', '0.04', '1/2586', 'statistical', 'significance', 'different', 'sex', 'groups', 'p', '0.3316', 'age', 'affected', 'prevalence', 'cystoisospora', 'cati', 'giardia', 'alaria', 'infections', 'prevalence', 'decreasing', 'age', 'increased', 'p', '0.0001', 'statistical', 'analyses', 'also', 'revealed', 'significant', 'differences', 'months', 'higher', 'prevalence', 'infection', 'occurred', 'summer', 'fall', 'p', '0.0004', 'overall', 'number', 'submittals', 'increased', 'prevalence', 'infection', 'increased', 'last', '12', 'years', 'p', '0.0001', 'study', 'supports', 'continuing', 'current', 'practice', 'routine', 'broad-spectrum', 'anthelmintic', 'ectoparasitic', 'treatments', 'client-owned', 'cats', 'well', 'annual/biannual', 'fecal', 'examination']\n",
      "\n",
      "Canine gastrointestinal nematode transmission potential in municipal dog parks in the southeast United States.\n",
      "['monthly', 'canine', 'parasite', 'prophylactic', 'products', 'prevent', 'adult', 'heartworm', 'infection', 'also', 'patent', 'infections', 'specific', 'gastrointestinal', 'parasites', 'monthly', 'products', 'control', 'treat', 'certain', 'hookworm', 'roundworm', 'infections', 'fewer', 'labeled', 'whipworm', 'trichuris', 'vulpis', 'therefore', 'hypothesized', 'fecal', 'samples', 'collected', 'municipal', 'dog', 'parks', 'greater', 'prevalence', 'whipworm', 'eggs', 'compared', 'hookworm', 'roundworm', 'eggs', 'study', 'canine', 'fecal', 'samples', 'collected', 'municipal', 'dog', 'parks', 'three', 'southeastern', 'states', '20', 'fecal', 'samples', 'collected', 'park', 'total', '200', 'fecal', 'samples', 'obtained', 'dog', 'parks', 'georgia', 'north', 'carolina', 'south', 'carolina', 'fecal', 'samples', 'examined', 'presence', 'gastrointestinal', 'helminths', 'simple', 'centrifugal', 'flotation', 'using', 'sheathers', 'sugar', 'flotation', 'solution', '200', 'samples', 'collected', '27', 'positive', 'gastrointestinal', 'helminths', 'fecal', 'flotation', 'infected', 'fecal', 'samples', '8.5', '17', '1.5', 'contained', 'whipworm', 'hookworm', 'roundworm', 'respectively', 'however', 'majority', 'hookworm-positive', 'samples', 'collected', 'one', 'park', 'whereas', 'whipworm', 'roundworm', 'samples', 'collected', 'multiple', 'parks', 'results', 'could', 'indicate', 'dogs', 'risk', 'infection', 'three', 'parasites', 'dog', 'parks', 'preventive', 'strategies', 'may', 'need', 'tailored', 'specific', 'region', 'specific', 'infected', 'dog', 'parks']\n",
      "\n",
      "Prevalence of Intestinal Helminth Infections in Dogs and Two Species of Wild Animals from Samarkand Region of Uzbekistan.\n",
      "['study', 'aimed', 'determine', 'prevalence', 'intestinal', 'helminth', 'parasitic', 'infections', 'associated', 'risk', 'factors', 'human', 'infection', 'among', 'people', 'samarkand', 'uzbekistan', 'infection', 'status', 'helminths', 'including', 'echinococcus', 'granulosus', 'surveyed', 'domestic', 'wild', 'animals', '4', 'sites', 'samarkand', 'region', 'uzbekistan', '2015-2018', 'fecal', 'samples', 'animal', 'examined', 'formalin-ether', 'sedimentation', 'technique', 'recovery', 'intestinal', 'helminths', 'performed', 'naked', 'eyes', 'stereomicroscope', 'total', '1,761', 'animals', '1,755', 'dogs', '1', 'golden', 'jackal', '5', 'corsac', 'foxes', 'total', '658', 'adult', 'worms', 'e', 'granulosus', 'detected', '28', '1.6', 'dogs', '1', '100', 'golden', 'jackal', '6', 'species', 'helminths', 'i.e', 'taenia', 'hydatigena', 'dipylidium', 'caninum', 'diplopylidium', 'nolleri', 'mesocestoides', 'lineatus', 'toxocara', 'canis', 'trichuris', 'vulpis', 'found', '18', '1.0', 'dogs', 'six', 'hydatigena', 'toxascaris', 'leonina', 'alaria', 'alata', 'uncinaria', 'stenocephala', 'caninum', 'lineatus', '2', 'nolleri', 'lineatus', 'species', 'helminths', 'also', 'detected', '5', 'corsac', 'foxes', '1', 'golden', 'jackal', 'respectively', 'taeniid', 'eggs', 'found', '2', '20', '10', 'soil', 'samples', 'present', 'study', 'confirmed', 'prevalences', 'helminths', 'including', 'e', 'granulosus', 'high', 'domestic', 'wild', 'animals', 'nevertheless', 'awareness', 'zoonotic', 'helminth', 'infections', 'continuously', 'maintained', 'uzbekistan', 'prevention', 'human', 'infection']\n",
      "\n",
      "Evaluation of DNA Extraction Methods on Individual Helminth Egg and Larval Stages for Whole-Genome Sequencing.\n",
      "['whole-genome', 'sequencing', 'rapidly', 'applied', 'study', 'helminth', 'genomes', 'including', 'de', 'novo', 'genome', 'assembly', 'population', 'genetics', 'diagnostic', 'applications', 'although', 'late-stage', 'juvenile', 'adult', 'parasites', 'typically', 'produce', 'sufficient', 'dna', 'molecular', 'analyses', 'parasitic', 'stages', 'almost', 'always', 'inaccessible', 'live', 'host', 'immature', 'life', 'stages', 'found', 'environment', 'samples', 'collected', 'non-invasively', 'offer', 'potential', 'alternative', 'however', 'samples', 'typically', 'yield', 'low', 'quantities', 'dna', 'environmentally', 'resistant', 'susceptible', 'contamination', 'often', 'bacterial', 'host', 'dna', 'tested', 'five', 'low-input', 'dna', 'extraction', 'protocols', 'together', 'low-input', 'sequencing', 'library', 'protocol', 'assess', 'feasibility', 'whole-genome', 'sequencing', 'individual', 'immature', 'helminth', 'samples', 'approaches', 'use', 'whole-genome', 'amplification', 'common', 'costly', 'approach', 'increase', 'yield', 'low-input', 'samples', 'first', 'tested', 'individual', 'parasites', 'two', 'species', 'spotted', 'onto', 'fta', 'cards-egg', 'l1', 'stages', 'haemonchus', 'contortus', 'miracidia', 'schistosoma', 'mansoni-before', 'testing', 'additional', 'five', 'species-ancylostoma', 'caninum', 'ascaridia', 'dissimilis', 'dirofilaria', 'immitis', 'strongyloides', 'stercoralis', 'trichuris', 'muris-with', 'optimal', 'protocol', 'sixth', 'species-dracunculus', 'medinensis-was', 'included', 'comparison', 'whole-genome', 'sequencing', 'followed', 'analyses', 'determine', 'proportion', 'on-', 'off-target', 'mapping', 'revealed', 'successful', 'sample', 'preparations', 'six', 'eight', 'species', 'tested', 'variation', 'species', 'different', 'life', 'stages', 'species', 'described', 'results', 'demonstrate', 'feasibility', 'whole-genome', 'sequencing', 'individual', 'parasites', 'highlight', 'new', 'avenue', 'toward', 'generating', 'sensitive', 'specific', 'information-rich', 'data', 'diagnosis', 'surveillance', 'helminths']\n",
      "\n",
      "Metabolomic profiling of the excretory-secretory products of hookworm and whipworm.\n",
      "['soil-transmitted', 'helminths', 'infect', 'billions', 'people', 'livestock', 'companion', 'animals', 'worldwide', 'chronic', 'infections', 'nematodes', 'represent', 'major', 'health', 'burden', 'many', 'developing', 'countries', 'hand', 'complete', 'elimination', 'parasitic', 'helminths', 'infectious', 'pathogens', 'implicated', 'rising', 'rates', 'autoimmune', 'allergic', 'disorders', 'developed', 'countries', 'given', 'enormous', 'health', 'impact', 'parasites', 'surprising', 'little', 'known', 'non-protein', 'small', 'metabolites', 'excretory-secretory', 'products', 'esp', 'including', 'composition', 'pharmacological', 'properties', 'sought', 'proof-of-concept', 'nippostrongylus', 'brasiliensis', 'trichuris', 'muris', 'rodent', 'models', 'two', 'important', 'human', 'soil-transmitted', 'helminths', 'secrete', 'small', 'metabolites', 'metabolites', 'may', 'specific', 'pharmacological', 'functions', 'n', 'brasiliensis', 'muris', 'esp', 'collected', 'adult', 'worms', 'filtered', 'using', '10', 'kda', 'cut-off', 'membrane', 'produce', 'excretory-secretory', 'metabolites', 'esm', 'esm', 'analysed', 'using', 'targeted', 'gas', 'chromatography-mass', 'spectrometry', 'liquid', 'chromatography-mass', 'spectrometry', 'polar', 'non-polar', 'small', 'metabolites', 'esm', 'n', 'brasiliensis', 'muris', 'contained', 'small', 'molecules', 'total', '54', 'small', 'molecules', '38', 'polar', 'metabolites', '16', 'fatty', 'acids', 'identified', '36', 'known', 'polar', 'metabolites', 'n', 'brasiliensis', '35', 'muris', 'literature', 'review', 'identified', 'compounds', 'revealed', '17', 'various', 'demonstrated', 'pharmacological', 'activities', 'n', 'brasiliensis', 'muris', 'secrete', 'polar', 'non-polar', 'small', 'molecules', 'many', '17', 'metabolites', 'known', 'exhibit', 'various', 'pharmacological', 'activities']\n",
      "\n",
      "Evaluation of emodepside in laboratory models of human intestinal nematode and schistosome infections.\n",
      "['helminthiases', 'prevalent', 'worldwide', 'yet', 'treatment', 'control', 'rely', 'handful', 'drugs', 'emodepside', 'marketed', 'broad-spectrum', 'veterinary', 'anthelminthic', 'unique', 'mechanism', 'action', 'undergoing', 'development', 'onchocerciasis', 'interesting', 'anthelmintic', 'drug', 'candidate', 'tested', 'vitro', 'vivo', 'activity', 'emodepside', 'nematode', 'species', 'serve', 'models', 'human', 'soil-transmitted', 'helminth', 'infection', 'well', 'schistosomes', 'vitro', 'viability', 'assays', 'performed', 'time', 'course', '72', 'hours', 'trichuris', 'muris', 'necator', 'americanus', 'ancylostoma', 'ceylanicum', 'heligmosomoides', 'polygyrus', 'strongyloides', 'ratti', 'schistosoma', 'mansoni', 'schistosoma', 'haematobium', 'drug', 'effect', 'determined', 'survival', 'rate', 'larvae', 'phenotypical', 'scores', 'adult', 'worms', 'additionally', 'mice', 'infected', 'muris', 'hamsters', 'harboring', 'hookworm', 'infection', 'n', 'americanus', 'ceylanicum', 'administered', 'orally', 'emodepside', 'doses', 'ranging', '1.25', '75', 'mg/kg', 'expelled', 'worms', 'feces', 'counted', '3', 'days', 'post-drug', 'intake', 'worms', 'residing', 'intestines', 'collected', 'counted', 'dissection', '24', 'hours', 'emodepside', 'active', 'vitro', 'larval', 'adult', 'stages', 'nematodes', 'muris', 'ceylanicum', 'n', 'americanus', 'h', 'polygyrus', 'ratti', 'ic50', '4', 'µm', 'good', 'vitro', 'activity', 'confirmed', 'vivo', 'hamsters', 'infected', 'hookworms', 'cured', 'administered', 'orally', '2.5', 'mg/kg', 'drug', 'emodepside', 'also', 'highly', 'active', 'vivo', 'muris', 'ed50', '1.2', 'mg/kg', 'emodepside', 'moderately', 'active', 'schistosomula', 'vitro', 'ic50', '8', 'µm', '24', 'h', 'post-drug', 'incubation', 'activity', 'adult', 'mansoni', 'haematobium', 'low', 'ic50', '30-50', 'µm', 'emodepside', 'highly', 'active', 'broad', 'range', 'nematode', 'species', 'vitro', 'vivo', 'development', 'emodepside', 'treating', 'soil-transmitted', 'helminth', 'infections', 'pursued']\n",
      "\n",
      "Metacommunity Structure of Helminths of Necromys lasiurus (Rodentia: Sigmodontinae) in Different Land Use Areas in the Brazilian Cerrado.\n",
      "['ecology', 'host-parasite', 'interactions', 'studied', 'infracommunity', 'component', 'community', 'scales', 'may', 'show', 'different', 'patterns', 'species', 'distributions', 'interacting', 'affecting', 'regional', 'scale', 'studies', 'carried', 'concerning', 'structure', 'variation', 'helminth', 'communities', 'wild', 'rodents', 'brazil', 'rodent', 'necromys', 'lasiurus', 'typical', 'mammalian', 'fauna', 'cerrado', 'biome', 'however', 'environmental', 'disturbances', 'making', 'species', 'occur', 'rural', 'areas', 'biomes', 'may', 'act', 'host/reservoir', 'many', 'diseases', 'study', 'aimed', 'describe', 'composition', 'structure', 'helminth', 'metacommunity', 'rodent', 'n', 'lasiurus', 'brazilian', 'cerrado', 'uberlândia', 'state', 'minas', 'gerais', 'using', 'analysis', 'metacommunity', 'structure', 'rodents', 'sampled', '3', 'habitat', 'types', 'borders', 'soybean', 'corn', 'plantations', 'pasturelands', 'preserved', 'areas', 'cerrado', 'borders', 'adult', 'helminths', '8', 'species', 'found', 'gastrointestinal', 'tract', 'protospirura', 'numidica', 'criceticola', 'physaloptera', 'sp', 'pterygodermatites', 'paucipectines', 'zygodontomis', 'spirurida', 'stilestrongylus', 'freitasi', 'rhabditida', 'trichuris', 'navonae', 'trichurida', 'syphacia', 'syphacia', 'alata', 'oxiurida', 'phylum', 'nematoda', 'rodentolepis', 'akodontis', 'cyclophyllidea', 'phylum', 'platyhelminthes', 'moniliformis', 'sp', 'moniliformida', 'phylum', 'acanthocephala', 'season', 'kind', 'land', 'use', 'favored', 'helminths', 'species', 'rodent', 'especially', 'plantation', 'area', 'although', 'diversity', 'largely', 'influenced', 'land', 'use', 'plantation', 'areas', 'could', 'provide', 'increase', 'host', 'abundance', 'occurrence', 'rodent', 'species', 'favoring', 'higher', 'rate', 'parasite', 'exchange', 'among', 'different', 'hosts', 'checkerboard', 'structure', 'metacommunity', 'found', 'infracommunity', 'scale', 'suggests', 'existence', 'interspecific', 'competition', 'quasi-nested', 'structure', 'metacommunity', 'observed', 'component', 'community', 'scale', 'showing', 'species', 'influenced', 'environmental', 'gradient', 'species-poor', 'communities', 'subsets', 'species-rich', 'communities', 'syphacia', 'alata', 'p', 'zygodontomis', 'freitasi', 'r', 'akodontis', 'dominant', 'species', 'habitats', 'represented', 'core-species', 'metacommunity']\n",
      "\n",
      "Prevalence of Endoparasites in Urban Stray Dogs from Brazil Diagnosed with Leishmania, with Potential for Human Zoonoses.\n",
      "['tropical', 'environments', 'abandoned', 'animals', 'important', 'source', 'human', 'zoonotic', 'infections', 'human', 'visceral', 'leishmaniasis', 'vector-borne', 'diseases', 'report', 'frequency', 'protozoan', 'helminth', 'intestinal', 'parasites', 'stray', 'dogs', 'might', 'implication', 'human', 'health', 'urban', 'brazilian', 'settings', 'performed', 'necropsies', '93', 'animals', 'euthanized', 'due', 'canine', 'visceral', 'leishmaniasis', 'control', 'program', 'examined', 'intestines', 'looking', 'presence', 'helminths', 'determined', 'parasite', 'load', 'elimination', 'eggs', 'cysts', 'protozoan', 'parasites', 'fecal', 'samples', 'performed', 'serology', 'tests', 'detection', 'specific', 'antibodies', 'toxoplasma', 'gondii', 'overall', 'high', 'prevalence', 'intestinal', 'parasites', 'potential', 'human', 'zoonoses', 'resulted', '8.6', 'examined', 'intestines', 'remained', 'negative', 'prevalent', 'helminths', 'ancylostoma', 'caninum', 'dipylidium', 'caninum', 'nematodes', 'high', 'worm', 'burdens', 'detected', 'caninum', 'trichuris', 'vulpis', 'additionally', 'analyzed', 'worm', 'burdens', 'quantitative', 'stool', 'examinations', 'found', 'significant', 'association', 'positive', 'serology', 'leishmania', 'infection', 'intestinal', 'parasite', 'burden', 'interestingly', 'serology', 'gondii', 'infection', 'revealed', 'prevalence', '33.3', 'positive', 'result', 'significantly', 'associated', 'higher', 'caninum', 'adult', 'worm', 'recovery', 'p', '0.0087', 'results', 'showed', 'stray', 'dogs', 'living', 'urban', 'areas', 'heavily', 'parasitized', 'presents', 'potential', 'risk', 'humans', 'beyond', 'control', 'canine', 'visceral', 'leishmaniasis', 'propose', 'improvement', 'control', 'program', 'reduce', 'risk', 'parasitic', 'diseases', 'dogs', 'humans']\n",
      "\n",
      "Helminth therapy for autism under gut-brain axis- hypothesis.\n",
      "['autism', 'neurodevelopmental', 'disease', 'included', 'within', 'autism', 'syndrome', 'disorder', 'asd', 'spectrum', 'asd', 'linked', 'series', 'genes', 'play', 'role', 'immune', 'response', 'function', 'patients', 'autism', 'commonly', 'suffer', 'immune-related', 'comorbidities', 'despite', 'complex', 'pathophysiology', 'autism', 'gut-brain', 'axis', 'gaining', 'strength', 'understanding', 'several', 'neurological', 'disorders', 'addition', 'recent', 'publications', 'shown', 'correlation', 'immune', 'dysfunctions', 'gut', 'microbiota', 'brain', 'behavioral', 'alterations', 'comorbid', 'symptoms', 'found', 'autism', 'gut-brain', 'axis', 'acts', 'second', 'brain', 'communication', 'network', 'established', 'neural', 'endocrine', 'immunological', 'systems', 'hand', 'hygiene', 'hypothesis', 'suggests', 'increase', 'incidence', 'autoimmune', 'diseases', 'modern', 'world', 'attributed', 'decrease', 'exposure', 'infectious', 'agents', 'parasitic', 'nematodes', 'helminths', 'induce', 'modulatory', 'protective', 'effects', 'several', 'inflammatory', 'disorders', 'maintaining', 'gastrointestinal', 'homeostasis', 'modulating', 'brain', 'functions', 'helminthic', 'therapy', 'previously', 'performed', 'diseases', 'ulcerative', 'colitis', 'crohns', 'disease', 'diabetes', 'multiple', 'sclerosis', 'asthma', 'rheumatoid', 'arthritis', 'food', 'allergies', 'considering', 'gut-brain', 'axis', 'hygiene', 'hypothesis', 'modulatory', 'effects', 'helminths', 'hypothesized', 'treatment', 'trichuris', 'suis', 'soluble', 'products', 'represents', 'feasible', 'holistic', 'treatment', 'autism', 'key', 'development', 'novel', 'treatments', 'preclinical', 'studies', 'required', 'test', 'hypothesis']\n",
      "\n",
      "Patterns of helminth infections in Rattus rattus and Mus musculus from two Mayan communities in Mexico.\n",
      "['black', 'rat', 'rattus', 'rattus', 'house', 'mouse', 'mus', 'musculus', 'two', 'commensal', 'rodent', 'species', 'harbour', 'shed', 'zoonotic', 'pathogens', 'including', 'helminths', 'aim', 'survey', 'study', 'helminth', 'community', 'patterns', 'infections', 'r', 'rattus', 'musculus', 'two', 'mayan', 'communities', 'mexico', 'gastrointestinal', 'helminths', 'isolated', '322', 'musculus', '124', 'r', 'rattus', 'including', 'gongylonema', 'neoplasticum', 'hassalstrongylus', 'aduncus', 'hassalstrongylus', 'musculi', 'hydatigera', 'taeniaeformis', 'metacestode', 'hymenolepis', 'diminuta', 'nippostrongylus', 'brasiliensis', 'oligacanthorhynchidae', 'gen', 'sp', 'syphacia', 'muris', 'syphacia', 'obvelata', 'rodentolepis', 'microstoma', 'trichuris', 'muris', 'overall', 'richness', 'helminths', 'seven', 'r', 'rattus', 'six', 'musculus', 'results', 'generalized', 'linear', 'models', 'showed', 'juvenile', 'rodents', 'lower', 'probabilities', 'infected', 'g', 'neoplasticum', 'h', 'taeniaeformis', 'h', 'musculi', 'adult', 'rodents', 'positive', 'association', 'prevalence', 'muris', 'rat', 'abundance', 'found', 'intensity', 'infection', 'muris', 'higher', 'rainy', 'season', 'dry', 'season', 'opposite', 'result', 'found', 'h', 'musculi', 'infection', 'male', 'r', 'rattus', 'harboured', 'muris', 'specimens', 'intensity', 'infection', 'muris', 'inversely', 'associated', 'mouse', 'abundance', 'presence', 'zoonotic', 'h', 'diminuta', 'well', 'h', 'taeniaeformis', 'r', 'microstoma', 'rodent', 'populations', 'indicates', 'risk', 'transmission', 'entire', 'life', 'cycle', 'occurs', 'study', 'area']\n",
      "\n",
      "Deworming in non-pregnant adolescent girls and adult women: a systematic review and meta-analysis.\n",
      "['impact', 'deworming', 'parasite', 'load', 'nutritional', 'status', 'health', 'outcomes', 'non-pregnant', 'adolescent', 'girls', 'adult', 'women', 'uncertain', 'medline', 'embase', 'cinahl', 'cochrane', 'central', 'register', 'controlled', 'trials', 'international', 'clinical', 'trials', 'registry', 'platform', 'cochrane', 'database', 'systematic', 'reviews', 'food', 'technology', 'abstracts', 'databases', 'searched', '24', 'september', '2018', 'studies', 'included', 'randomised', 'controlled', 'trials', 'rcts', 'controlled', 'studies', 'interrupted', 'time', 'studies', 'comparing', 'deworming', 'intervention', 'placebo', 'non-pregnant', 'adolescent', 'girls', 'women', '10', '49', 'years', 'old', 'outcomes', 'interest', 'included', 'parasite', 'load', 'reinfection', 'anaemia', 'severe', 'anaemia', 'iron', 'deficiency', 'diarrhoea', 'all-cause', 'morbidity', 'risk', 'bias', 'assessed', 'using', 'cochrane', 'risk', 'bias', 'tool', 'included', 'four', 'rcts', 'mass', 'deworming', 'involving', '1086', 'participants', 'analyses', 'mass', 'deworming', 'probably', 'reduces', 'prevalence', 'roundworm', 'infection', 'rr', '0.29', '95', 'ci', '0.14', '0.62', '2', 'trials', '1498', 'participants', 'moderate', 'certainty', 'evidence', 'prevalence', 'hookworm', 'infection', 'rr', '0.32', '95', 'ci', '0.18', '0.59', '2', 'trials', '1498', 'participants', 'moderate', 'certainty', 'evidence', 'prevalence', 'whipworm', 'infection', 'rr', '0.77', '95', 'ci', '0.65', '0.91', '2', 'trials', '1498', 'participants', 'moderate', 'certainty', 'evidence', 'compared', 'control', 'group', 'deworming', 'may', 'make', 'little', 'difference', 'prevalence', 'anaemia', 'rr', '0.82', '95', 'ci', '0.60', '1.11', '3', 'studies', '683', 'participants', 'low', 'certainty', 'evidence', 'prevalence', 'iron-deficiency', 'rr', '0.89', '95', 'ci', '0.64', '1.23', '1', 'study', '186', 'participants', 'low', 'certainty', 'evidence', 'compared', 'control', 'uncertain', 'whether', 'deworming', 'reduces', 'prevalence', 'severe', 'anaemia', 'compared', 'control', 'certainty', 'evidence', 'low', 'none', 'included', 'studies', 'assessed', 'screen', 'treat', 'deworming', 'reported', 'reinfection', 'diarrhoea', 'adverse', 'events', 'mass', 'deworming', 'probably', 'reduces', 'prevalence', 'soil-transmitted', 'helminth', 'infections', 'may', 'little', 'effect', 'anaemia', 'iron-deficiency', 'adolescent', 'girls', 'non-pregnant', 'women', 'comparison', 'intervention', 'placebo', 'uncertain', 'effect', 'severe', 'anaemia', 'results', 'limited', 'sparse', 'data', 'moderate', 'low', 'quality', 'evidence', 'available', 'protocol', 'registered', 'prospero', 'registration', 'number', 'crd42016039557', '.', 'primary', 'source', 'funding', 'evidence', 'programme', 'guidance', 'unit', 'department', 'nutrition', 'health', 'development', 'world', 'health', 'organization']\n",
      "\n",
      "Parasitic Helminths in Wild Boars (Sus scrofa) in Mazandaran Province, Northern Iran.\n",
      "['wild', 'boars', 'sus', 'scrofa', 'distributed', 'worldwide', 'found', 'many', 'parts', 'iran', 'although', 'scrofa', 'reservoirs', 'many', 'parasites', 'little', 'data', 'helminthic', 'prevalence', 'aimed', 'survey', 'status', 'helminthic', 'infections', 'scrofa', 'mazandaran', 'province', 'northern', 'iran', 'twenty-one', 'wild', 'boars', 'captured', 'examined', 'helminth', 'infection', 'dec', '2012-mar', '2014', 'adult', 'worms', 'macracanthorhynchus', 'hirudinaceus', 'identified', 'helminth', 'size', 'shape', 'arrangement', 'proboscis', 'hooks', 'sedimentation', 'flotation', 'techniques', 'used', 'detect', 'parasite', 'eggs', 'larvae', 'faecal', 'samples', 'muscle', 'samples', 'also', 'surveyed', 'trichinella', 'larvae', 'artificial', 'digestion', 'method', '21', 'samples', '13', '61.9', 'infected', 'one', 'helminth', 'species', 'seven', 'helminth', 'types', 'identified', 'alimentary', 'track', 'comprising', '5', 'nematodes', '1', 'trematode', '1', 'acanthocephalan', 'prevalence', 'rates', 'macracanthorhynchus', 'hirudinaceus', '57.14', 'globocephalus', 'spp', '33.33', 'trichuris', 'suis', '19.04', 'gongylonema', 'pulchrum', '14.28', 'fasciola', 'hepatica', '14.28', 'dioctophyma', 'renale', '4.76', 'ascaris', 'suum', '4.76', 'wild', 'boars', 'might', 'involved', 'transmitting', 'zoonotic', 'parasites', 'humans', 'abundance', 'animals', 'near', 'human', 'habitation', 'creates', 'favorable', 'conditions', 'infection', 'risk', 'parasitic', 'helminth', 'diseases', 'increases', 'animals', 'humans']\n",
      "\n",
      "Severe whipworm (Trichuris spp.) infection in the hamadryas baboon (Papio hamadryas).\n",
      "['3-year-old', 'male', 'hamadryas', 'baboon', 'papio', 'hamadryas', 'seoul', 'zoo', 'korea', 'died', 'without', 'previous', 'symptoms', 'necropsy', 'revealed', 'severe', 'whipworm', 'infection', 'large', 'intestine', 'animal', 'weighed', '2.6', 'kg', 'blood', 'clot', 'anus', 'numerous', 'whipworms', 'found', 'attached', 'intestinal', 'wall', 'anterior', 'ends', 'embedded', 'mucosa', 'fecal', 'microscopy', 'revealed', 'typical', 'barrel-shaped', 'brown', 'eggs', 'trichuris', 'spp', 'hyaline', 'polar', 'plugs', 'end', 'histopathological', 'examination', 'revealed', 'thin', 'anterior', 'part', 'trichuris', 'spp', 'embedded', 'mucosal', 'layer', 'thick', 'posterior', 'part', 'mucosal', 'surface', 'hanging', 'freely', 'intestinal', 'lumen', 'case', 'emphasizes', 'importance', 'parasitic', 'infection', 'management', 'zoo', 'animals']\n",
      "\n",
      "Knowledge, attitude and practice with respect to soil contamination by Soil-Transmitted Helminths in Ibadan, Southwestern Nigeria.\n",
      "['ancylostoma', 'duodenale', 'necator', 'americanus', 'ascaris', 'lumbricoides', 'trichuris', 'trichiura', 'four', 'major', 'soil-transmitted', 'helminths', 'sths', 'also', 'strongyloides', 'stercoralis', 'infect', 'humans', 'worldwide', 'studies', 'soil-transmitted', 'helminths', 'sths', 'carried', 'ibadan', 'faecal', 'examination', 'based', 'relatively', 'soil', 'examination', 'based', 'studies', 'carried', 'mostly', 'around', 'school', 'premises', 'using', 'limited', 'number', 'sampling', 'locations', 'study', 'therefore', 'designed', 'assess', 'level', 'soil', 'contamination', 'sth', 'associated', 'risk', 'factors', 'eleven', 'local', 'government', 'areas', 'ibadan', 'total', '1980', 'soil', 'samples', 'purposively', 'collected', 'monthly', 'january', 'december', '2017', 'toilet', 'areas', 'refuse', 'dump', 'sites', 'house', 'vicinities', 'playgrounds', 'roadsides/walk', 'ways', 'examined', 'presence', 'parasite', 'eggs', 'larvae', 'using', 'automated', 'analysis', 'light', 'microscopy', 'images', 'computer', 'well-structured', 'questionnaires', 'administered', '620', 'consenting', 'participants', 'obtain', 'information', 'knowledge', 'sth', 'infections', 'attitudes', 'practices', 'towards', 'infections', 'data', 'analyzed', 'using', 'spss', 'version', '21', 'chi-square', 'anova', 'used', 'analysis', 'p', '0.05', 'soil', 'samples', 'examined', '1087', '54.9', 'least', 'one', 'species', 'parasite', 'prevalence', 'hookworm', '74.5', 'followed', '50.2', '37.2', 'strongyloides', 'species', 'larvae', 'adult', 'respectively', '25.1', 'ascaris', 'species', 'highest', 'prevalence', 'observed', 'refuse', 'dump', '74.2', 'followed', 'toilet', 'area', '36.5', 'lowest', 'house', 'vicinities', '1.6', 'fifty-seven', 'percent', 'respondents', 'use', 'pit', 'latrine', '20.6', 'still', 'practice', 'open', 'defecation', 'high', 'transmission', 'risk', 'observed', 'large', 'percentage', '66.8', 'respondents', 'showed', 'inadequate', 'knowledge', 'avoid', 'sth', 'infections', 'moreover', '64.0', '25.2', 'reported', 'often', 'walk', 'barefooted', 'suck', 'fingers', 'respectively', 'high', 'prevalence', 'parasitic', 'contamination', 'soil', 'observed', 'present', 'study', 'high', 'proportion', 'respondent', 'inadequate', 'knowledge', 'prevent', 'transmission', 'sth', 'pose', 'high', 'risk', 're-infections', 'study', 'area', 'even', 'treatment', 'therefore', 'need', 'proper', 'education', 'parasite', 'transmission', 'area']\n",
      "\n",
      "Young Adults in Endemic Areas: An Untreated Group in Need of School-Based Preventive Chemotherapy for Schistosomiasis Control and Elimination.\n",
      "['parasitologic', 'surveys', 'young', 'adults', 'college', 'university', 'settings', 'commonly', 'done', 'even', 'areas', 'known', 'endemic', 'schistosomiasis', 'soil-transmitted', 'helminths', 'done', 'survey', '291', 'students', 'staff', 'kisumu', 'national', 'polytechnic', 'kisumu', 'kenya', 'using', 'stool', 'microscopy', 'kato-katz', 'kk', 'method', 'urine', 'point-of-care', 'circulating', 'cathodic', 'antigen', 'poc-cca', 'test', 'based', 'three', 'stools/two', 'kk', 'slides', '208', 'participants', 'three', 'consecutive', 'stools', 'obtained', 'schistosoma', 'mansoni', 'prevalence', '17.8', '291', 'individuals', 'analyzed', 'based', 'first', 'stool', 'done', 'national', 'neglected', 'tropical', 'disease', 'ntd', 'program', 'one', 'urine', 'poc-cca', 'assay', 'n', '276', 'prevalence', '13.7', 'kk', '23.2', 'poc-cca', 'based', 'three', 'stools', '2.5', '208', 'participants', 'heavy', 'mansoni', 'infections', '≥400', 'eggs/gram', 'feces', 'heavy', 'mansoni', 'infections', 'making', '13.5', 'mansoni', 'cases', 'prevalence', 'soil-transmitted', 'helminths', 'sth', 'ascaris', 'lumbricoides', 'trichuris', 'trichiura', 'hookworm', 'three', 'stools', '1.4', '3.1', '4.1', 'respectively', 'first', 'stool', '1.4', '2.4', '1.4', 'respectively', 'prevalence', 'intensity', 'infection', 'mansoni', 'college', 'setting', 'warrants', 'mass', 'drug', 'administration', 'praziquantel', 'population', 'young', 'adults', 'school', 'approachable', 'worthy', 'inclusion', 'national', 'schistosomiasis', 'control', 'elimination', 'programs']\n",
      "\n",
      "Randomized crossover feasibility trial of helminthic Trichuris suis ova versus placebo for repetitive behaviors in adult autism spectrum disorder.\n",
      "['objectives', 'inflammatory', 'mechanisms', 'implicated', 'aetiology', 'autism', 'spectrum', 'disorder', 'asd', 'use', 'immunomodulator', 'trichuris', 'suis', 'ova', 'tso', 'novel', 'treatment', 'approach', 'pilot', 'study', 'determined', 'effect', 'sizes', 'tso', 'versus', 'placebo', 'repetitive', 'behaviours', 'irritability', 'global', 'functioning', 'adults', 'asd.methods', '28-week', 'double-blind', 'randomised', 'two-period', 'crossover', 'study', 'tso', 'versus', 'placebo', 'ten', 'asd', 'adults', 'aged', '17-35', 'completed', '4-week', 'washout', '12-week', 'period', 'montefiore', 'medical', 'center', 'albert', 'einstein', 'college', 'medicine', 'subjects', 'asd', 'history', 'seasonal', 'medication', 'food', 'allergies', 'y-bocs', '≥6', 'iq', '≥70', 'received', '2,500', 'tso', 'ova', 'matching', 'placebo', 'every', '2', 'weeks', '12-week', 'period.results', 'large', 'effect', 'sizes', 'improvement', 'repetitive', 'behaviours', '1.0', 'restricted', 'interests', '0.82', 'rigidity', '0.79', 'irritability', '0.78', 'observed', '12', 'weeks', 'treatment', 'changes', 'observed', 'social-communication', 'domain', 'differences', 'treatment', 'groups', 'reach', 'statistical', 'significance', 'tso', 'minimal', 'non-serious', 'side', 'effects.conclusions', 'proof-of-concept', 'study', 'demonstrates', 'feasibility', 'tso', 'treatment', 'asd', 'including', 'favourable', 'safety', 'profile', 'moderate', 'large', 'effect', 'sizes', 'reducing', 'repetitive', 'behaviours', 'irritability.clinicaltrials.gov', 'nct01040221']\n",
      "\n",
      "Long-term occurrence of Trichuris species in wild ruminants in the Czech Republic.\n",
      "['aim', 'study', 'identify', 'trichuris', 'species', 'wild', 'ruminants', '32', 'localities', 'czech', 'republic', 'using', 'morphological', 'molecular', 'methods', 'its1-5.8s', 'rna-its2', 'region', 'polymorphisms', 'trichurids', 'obtained', '176', 'wild', 'ruminants', 'roe', 'deer', 'sika', 'deer', 'red', 'deer', 'fallow', 'deer', 'mouflons', 'culled', '2009', '2017', 'trichuris', 'discolor', 'predominant', 'trichurid', 'above-mentioned', 'wild', 'ruminants', 'whereas', 'trichuris', 'ovis', 'identified', 'less', 'frequently', 'roe', 'deer', 'fallow', 'deer', 'sika', 'deer', 'mouflons', 'red', 'deer', 'parasitised', 'exclusively', 'discolor', 'young', 'hosts', '1', 'year', 'age', 'intensively', 'infected', 'trichurids', 'adults', 'χ2', '32.02', 'p', '0.00', 'trichurid', 'prevalence', 'results', 'obtained', 'coprological', 'methods', 'based', 'parasitological', 'dissections', 'differed', 'significantly', 'χ2', '16.26', 'p', '0.00', 'regression', 'analysis', 'indicated', 'eggs', 'per', 'gram', 'epg', 'threshold', '20', 'epg', 'exceeded', 'host', 'parasitised', '7', 'trichurid', 'females', 'full', 'concordance', 'positive', 'results', 'obtained', 'coprological', 'methods', 'obtained', 'via', 'direct', 'dissections', 'achieved', 'number', 'trichurid', 'females', 'per', 'host', 'exceeded', '51']\n",
      "\n",
      "Small Molecule Inhibitors of Metabolic Enzymes Repurposed as a New Class of Anthelmintics.\n",
      "['enormous', 'prevalence', 'infections', 'caused', 'parasitic', 'nematodes', 'worldwide', 'coupled', 'rapid', 'emergence', 'resistance', 'commonly', 'used', 'anthelmintic', 'drugs', 'presents', 'urgent', 'need', 'discovery', 'new', 'drugs', 'herein', 'identified', 'several', 'classes', 'small', 'molecules', 'broad', 'spectrum', 'activity', 'pathogens', 'previously', 'reported', 'identification', 'carnitine', 'palmitoyltransferases', 'cpts', 'representative', 'class', 'enzymes', 'potential', 'targets', 'metabolic', 'chokepoint', 'intervention', 'elucidated', 'combination', 'chemogenomic', 'screening', 'experimental', 'testing', 'nematodes', 'expanding', 'previous', 'findings', 'discovered', 'several', 'chemical', 'classes', 'known', 'small', 'molecule', 'inhibitors', 'mammalian', 'cpts', 'potent', 'activity', 'anthelmintics', 'cross-clade', 'efficacy', 'broad', 'spectrum', 'adult', 'parasitic', 'nematodes', 'demonstrated', 'multiple', 'compounds', 'different', 'series', 'several', 'analogs', 'initial', 'hit', 'compounds', 'designed', 'synthesized', 'compounds', 'report', 'represent', 'good', 'starting', 'point', 'lead', 'identification', 'optimization', 'development', 'new', 'anthelmintic', 'drugs', 'broad', 'spectrum', 'activity', 'novel', 'mechanism', 'action']\n",
      "\n",
      "Ancylostoma ceylanicum, novel etiological agent for traveler's diarrhea-report of four Japanese patients who returned from Southeast Asia and Papua New Guinea.\n",
      "['countries', 'southeast', 'asia', 'region', 'high', 'prevalence', 'soil-transmitted', 'helminth', 'roundworm', 'whipworm', 'hookworms', 'ancylostoma', 'duodenale', 'necator', 'americanus', 'ancylostoma', 'ceylanicum', 'recent', 'molecular-based', 'surveys', 'revealed', 'ceylanicum', 'zoonotic', 'hookworm', 'likely', 'second', 'prevalent', 'hookworm', 'species', 'infecting', 'humans', 'part', 'world', 'others', 'noted', 'infection', 'emerging', 'public', 'health', 'risk', 'indigenous', 'people', 'also', 'visitors', 'countries', 'recently', 'encountered', 'four', 'cases', 'ceylanicum', 'infection', 'japanese', 'individuals', 'returned', 'southeast', 'asia', 'papua', 'new', 'guinea', 'case', '1', '25-year-old', 'male', 'stayed', 'rainforest', 'malaysia', '4', 'weeks', 'developed', 'abdominal', 'pain', 'diarrhea', 'third', 'week', 'eleven', 'adult', 'worms', 'five', 'males', 'six', 'females', 'expelled', 'treatment', 'pyrantel', 'pamoate', 'identified', 'ceylanicum', 'based', 'morphological', 'characteristics', 'dna', 'sequences', 'mitochondrial', 'cytochrome', 'c', 'oxidase', 'subunit', '1', 'cox1', 'gene', 'case', '2', '26-year-old', 'male', 'spent', '2', 'years', 'overseas', 'cooperation', 'volunteer', 'agriculture', 'papua', 'new', 'guinea', 'note', 'symptoms', 'time', 'though', 'eggs', 'detected', 'feces', 'samples', 'medical', 'check-up', 'examination', 'returning', 'although', 'collection', 'adult', 'worms', 'unsuccessful', 'dna', 'analysis', 'eggs', 'cox1', 'ribosomal', 'internal', 'transcribed', 'spacer', 'its-1', 'its-2', 'genes', 'demonstrated', 'ceylanicum', 'case', '3', '47-year-old', 'male', 'spent', '1', 'month', 'rural', 'village', 'lao', 'peoples', 'democratic', 'republic', 'began', 'suffering', 'watery', 'diarrhea', 'third', 'week', 'total', 'nine', 'adult', 'worms', 'three', 'males', 'six', 'females', 'collected', 'endoscopic', 'procedures', 'following', 'treatment', 'pyrantel', 'pamoate', 'morphological', 'examination', 'molecular', 'analyses', 'cox1', 'gene', 'showed', 'ceylanicum', 'case', '4', '27-year-old', 'male', 'participated', 'group', 'travel', 'india', '5', 'days', 'three', 'weeks', 'returning', 'developed', 'abdominal', 'pain', 'diarrhea', 'hookworm', 'eggs', 'found', 'feces', 'samples', 'developed', 'larvae', 'culture', 'identified', 'ceylanicum', 'based', 'molecular', 'analysis', 'cox1', 'gene', 'eosinophilia', 'observed', 'cases', 'prior', 'treatment', 'ceylanicum', 'recognized', 'important', 'etiologic', 'pathogen', 'hookworm', 'diseases', 'travelers', 'countries', 'southeast', 'asia', 'west', 'pacific', 'ocean', 'regions']\n",
      "\n",
      "Prevalence of Intestinal Parasites and Associated Risk Factors for Infection among Rural Communities of Chachoengsao Province, Thailand.\n",
      "['intestinal', 'parasitic', 'infections', 'remain', 'major', 'public', 'health', 'problem', 'many', 'parts', 'thailand', 'particularly', 'rural', 'areas', 'study', 'aimed', 'determine', 'prevalence', 'intestinal', 'parasitic', 'infections', 'associated', 'risk', 'factors', 'among', 'people', 'living', 'huai', 'sai', 'sub-district', 'bang', 'khla', 'district', 'chachoengsao', 'province', 'central', 'thailand', 'cross-sectional', 'survey', 'carried', 'june', '2017', 'august', '2017', 'included', 'total', '224', 'participants', 'stool', 'samples', 'examined', 'using', 'simple', 'direct', 'smear', 'formalin', 'ethyl', 'acetate', 'concentration', 'technique', 'association', 'risk', 'factors', 'intestinal', 'parasitic', 'infections', 'assessed', 'using', 'multivariate', 'logistic', 'regression', 'analysis', 'overall', 'prevalence', 'intestinal', 'parasitic', 'infections', '16.1', 'soil-transmitted', 'helminth', 'infections', '14.3', 'common', 'protozoan', 'infections', '1.8', 'common', 'intestinal', 'parasites', 'hookworms', '6.7', 'followed', 'strongyloides', 'stercoralis', '5.0', 'ascaris', 'lumbricoides', '1.3', 'trichuris', 'trichiura', '1.3', 'entamoeba', 'histolytica/dispar', '1.0', 'giardia', 'intestinalis', '0.4', 'blastocystis', 'hominis', '0.4', 'protozoans', 'identified', 'high', 'prevalence', 'infections', 'found', 'male', 'participants', '≥40', 'years', 'raised', 'dogs', 'households', 'wear', 'boots', 'working', 'fields', 'multivariate', 'analysis', 'showed', 'significant', 'association', 'intestinal', 'parasitic', 'infections', 'gender', 'adjusted', 'odds', 'ratio', '2.4', '95', 'confidence', 'interval', 'ci', '1.1-5.2', 'p0.020', 'results', 'showed', 'high', 'prevalence', 'soil-transmitted', 'helminth', 'infections', 'among', 'adults', 'rural', 'communities', 'particularly', 'apparent', 'regarding', 'skin-penetrating', 'species', 'nematodes', 'greater', 'focus', 'intervention', 'required', 'improving', 'sanitation', 'personal', 'hygiene', 'prevent', 'spread', 'intestinal', 'parasitic', 'infections']\n",
      "\n",
      "The optimal timing of post-treatment sampling for the assessment of anthelminthic drug efficacy against Ascaris infections in humans.\n",
      "['egg', 'reduction', 'rate', 'err', 'current', 'standard', 'mean', 'assess', 'efficacy', 'drugs', 'human', 'soil-transmitted', 'helminths', 'sths', 'ascaris', 'lumbricoides', 'trichuris', 'trichiura', 'hookworm', 'although', 'timing', 'post-treatment', 'sampling', 'pivotal', 'readily', 'interpretation', 'drug', 'efficacy', 'lack', 'empirical', 'data', 'allows', 'recommending', 'optimal', 'time', 'point', 'follow-up', 'egg', 'counting', 'present', 'study', 're-analyzed', 'kinetics', 'worm', 'expulsion', 'egg', 'output', 'ascaris', 'lumbricoides', 'following', 'single', 'oral', 'dose', 'albendazole', 'series', 'studies', 'previously', 'conducted', 'kenyan', 'communities', 'results', 'indicate', 'takes', '10', 'days', 'post-treatment', 'expulsion', 'adult', 'male', 'female', 'ascaris', 'worms', 'completed', 'approximately', '20', 'worms', 'expelled', 'day', '7', '10', 'post-treatment', 'sequential', 'analysis', 'egg', 'put', 'indicated', 'poor', 'err', '89.4', 'day', '7', 'post-treatment', '100', 'err', 'day', '14', '21', 'post-treatment', 'based', 'findings', 'recommend', 'wait', 'least', '14', 'days', 'albendazole', 'treatment', 'conducting', 'follow-up', 'egg', 'count', 'sampling', 'time', 'point', 'may', 'result', 'biased', 'err', 'estimates', 'due', 'release', 'residual', 'eggs', 'moribund', 'degenerating', 'worms']\n",
      "\n",
      "Helminth Infections of Rodents and Their Zoonotic Importance in Boyer-Ahmad District, Southwestern Iran.\n",
      "['rodents', 'considered', 'reservoirs', 'various', 'zoonotic', 'diseases', 'including', 'helminthic', 'infections', 'current', 'study', 'aimed', 'evaluate', 'prevalence', 'helminth', 'infections', 'rodents', 'boyer-ahmad', 'district', 'southwestern', 'iran', 'overall', '52', 'rodents', 'captured', 'various', 'areas', 'district', 'sherman', 'live', 'traps', 'animals', 'euthanized', 'dissected', 'necropsy', 'organ', 'examined', 'macroscopically', 'presence', 'cyst', 'visible', 'parasite', 'gastrointestinal', 'tract', 'removed', 'contents', 'evaluated', 'larva', 'adult', 'worms', 'trichinella', 'larvae', 'rodents', 'muscles', 'investigated', 'digestion', 'pathological', 'methods', 'twenty-eight', '53.8', 'trapped', 'rodents', 'male', 'rodents', 'including', '25', '48.1', 'meriones', 'persicus', '11.9', 'calomyscus', 'bailwardi', '1', '1.9', 'arvicola', 'terresterris', '7', '13.5', 'rattus', 'rattus', '8', '15.4', 'r', 'norvegicus', '10', '19.2', 'apodemus', 'sylvaticus', '38', '73.0', 'infected', 'least', 'one', 'helminth', 'collected', 'rodents', 'infected', 'hymenolepis', 'diminuta', '50', 'hymenolepis', 'nana', 'fraterna', '28.8', 'skrjabinotaenia', 'sp', '15.4', 'anoplocephalidae', 'sp', '15.4', 'cysticercus', 'fasciolaris', '5.8', 'trichuris', 'muris', '36.5', 'aspiculuris', 'tetraptera', '15.4', 'syphacia', 'sp', '5.7', 'rictularia', 'sp', '15.4', 'trichostrongylus', 'sp', '3.8', 'gongylonema', 'sp', '3.8', 'persicus', '84', 'infected', 'rodent', 'yet', 'differences', 'rodent', 'genus', 'helminth', 'infectivity', 'statistically', 'significant', 'p0.05', 'rodents', 'boyer-ahmad', 'district', 'infected', 'different', 'helminths', 'infections', 'recognized', 'threat', 'human', 'health']\n",
      "\n",
      "Polypyridylruthenium(II) complexes exert in vitro and in vivo nematocidal activity and show significant inhibition of parasite acetylcholinesterases.\n",
      "['4.5', 'billion', 'people', 'risk', 'infection', 'soil', 'transmitted', 'helminths', 'concerns', 'development', 'resistance', 'handful', 'frontline', 'nematocides', 'endemic', 'populations', 'investigated', 'anti-nematode', 'efficacy', 'series', 'polypyridylrutheniumii', 'complexes', 'showed', 'active', 'l3', 'adult', 'stages', 'trichuris', 'muris', 'rodent', 'homologue', 'causative', 'agent', 'human', 'trichuriasis', 'trichiura', 'one', 'compounds', 'rubb12-mono', 'among', 'potent', 'ability', 'kill', 'l3', 'ic50', '3.1', '±', '0.4', 'μm', 'adult', 'ic50', '5.2', '±', '0.3', 'μm', 'stage', 'worms', 'assessed', 'efficacy', 'mouse', 'model', 'trichuriasis', 'administering', '3', 'consecutive', 'daily', 'oral', 'doses', 'drug', '3', 'weeks', 'post', 'infection', 'murine', 'whipworm', 'trichuris', 'muris', 'mice', 'treated', 'rubb12-mono', 'showed', 'average', '66', 'reduction', 'p', '0.015', 'faecal', 'egg', 'count', 'two', 'independent', 'trials', 'drugs', 'partially', 'exerted', 'activity', 'inhibition', 'acetylcholinesterases', 'worms', 'treated', 'vitro', 'vivo', 'showed', 'significant', 'decreases', 'activity', 'class', 'enzymes', 'data', 'show', 'ruthenium', 'complexes', 'effective', 'muris', 'model', 'gastro-intestinal', 'nematode', 'soil-transmitted', 'helminth', 'knowledge', 'target', 'ruthenium', 'drugs', 'facilitate', 'modification', 'current', 'compounds', 'identify', 'analogues', 'even', 'effective', 'selective', 'trichuris', 'helminths', 'human', 'veterinary', 'importance']\n",
      "\n",
      "Pathway of oxfendazole from the host into the worm: Trichuris suis in pigs.\n",
      "['well', 'known', 'efficacy', 'single', 'oral', 'dose', 'benzimidazoles', 'trichuris', 'spp', 'infections', 'humans', 'animals', 'poor', 'currently', 'still', 'used', 'control', 'programmes', 'human', 'trichuriasis', 'however', 'route', 'benzimidazoles', 'treated', 'host', 'trichuris', 'remains', 'unknown', 'parts', 'adult', 'trichuris', 'situated', 'intracellularly', 'caecum', 'might', 'exposed', 'anthelmintic', 'drugs', 'intestinal', 'content', 'well', 'mucosa', 'study', 'pathway', 'oxfendazole', 'metabolites', 'explored', 'using', 'suis-pig', 'infection', 'model', 'simultaneously', 'measuring', 'drug', 'concentrations', 'within', 'worms', 'caecal', 'mucosa', 'caecal', 'tissue', 'caecal', 'content', 'plasma', 'pigs', 'time', 'single', 'oral', 'dose', '5', 'mg/kg', 'oxfendazole', 'additionally', 'comparison', 'vivo', 'study', 'drug', 'uptake', 'metabolism', 'oxfendazole', 'suis', 'examined', 'vitro', 'incubation', 'oxfendazole', 'metabolites', 'quantified', 'high', 'performance', 'liquid', 'chromatography', 'multivariate', 'linear', 'regression', 'analysis', 'showed', 'strong', 'highly', 'significant', 'association', 'ofz', 'concentrations', 'within', 'suis', 'plasma', 'along', 'weaker', 'association', 'ofz', 'concentrations', 'caecal', 'tissue/mucosa', 'suis', 'suggesting', 'oxfendazole', 'reaches', 'suis', 'absorption', 'gastrointestinal', 'tract', 'enters', 'worms', 'blood-enterocyte', 'pathway', 'fenbendazole', 'sulfone', 'level', 'suis', 'highly', 'affected', 'concentrations', 'plasma', 'addition', 'correlations', 'drug', 'concentrations', 'host', 'compartments', 'generally', 'highest', 'metabolite', 'comparison', 'oxfendazole', 'correlation', 'plasma', 'content', 'particularly', 'high', 'metabolite', 'suggesting', 'high', 'level', 'drug', 'movement', 'compartments', 'possible', 'involvement', 'enterohepatic', 'circulation']\n",
      "\n",
      "Diagnostic strategies to reveal covert infections with intestinal helminths in dogs.\n",
      "['intestinal', 'helminths', 'common', 'dogs', 'united', 'states', 'particularly', 'non-treated', 'dogs', 'animal', 'shelters', 'surveys', 'fecal', 'flotation', 'may', 'underestimate', 'prevalence', 'determine', 'prevalence', 'intestinal', 'helminths', 'evaluate', 'ability', 'fecal', 'flotation', 'detection', 'nematode', 'antigen', 'identify', 'infections', 'contents', 'entire', 'gastrointestinal', 'tract', '97', 'adult', '1year', 'dogs', 'previously', 'identified', 'humane', 'euthanasia', 'two', 'animal', 'control', 'shelters', 'northeastern', 'oklahoma', 'usa', 'screened', 'helminths', 'recovered', 'washed', 'saline', 'fixed', 'prior', 'enumeration', 'identification', 'genus', 'species', 'fecal', 'samples', 'dog', 'examined', 'passive', 'sodium', 'nitrate', 'sg', '1.33', 'centrifugal', 'sugar', 'solution', 'sg', '1.25', 'flotation', 'fecal', 'antigen', 'detection', 'assays', 'used', 'confirm', 'presence', 'nematode', 'antigen', 'frozen', 'fecal', 'samples', '92', 'dogs', 'necropsy', 'examination', 'revealed', 'ancylostoma', 'caninum', '45/97', '46.4', 'toxocara', 'canis', '11/97', '11.3', 'trichuris', 'vulpis', '38/97', '39.2', 'dipylidium', 'caninum', '48/97', '49.5', 'taenia', 'sp', '7/97', '7.2', 'dogs', 'passive', 'fecal', 'flotation', 'identified', '38/45', '84.4', 'caninum', '6/11', '54.5', 'canis', '26/38', '68.4', 'vulpis', '2/48', '4.2', 'caninum', '1/7', '14.3', 'taenia', 'sp', 'infections', 'centrifugal', 'flotation', 'combined', 'antigen', 'detection', 'assays', 'identified', 'caninum', '97.7', '43/44', 'canis', '77.8', '7/9', 'vulpis', '83.3', '30/36', 'infected', 'dogs', 'based', 'necropsy', 'recovery', 'nematodes', 'taken', 'together', 'data', 'indicate', 'detection', 'nematode', 'antigen', 'useful', 'adjunct', 'microscopic', 'examination', 'fecal', 'samples', 'parasite', 'eggs', 'approach', 'improve', 'diagnostic', 'sensitivity', 'intestinal', 'nematode', 'infections', 'dogs']\n",
      "\n",
      "Safety and efficacy of helminth treatment in relapsing-remitting multiple sclerosis: Results of the HINT 2 clinical trial.\n",
      "['hygiene', 'hypothesis', 'suggests', 'microbial', 'replacement', 'may', 'therapeutic', 'allergic', 'autoimmune', 'diseases', 'nevertheless', 'results', 'helminth', 'treatment', 'including', 'multiple', 'sclerosis', 'ms', 'inconclusive', 'assess', 'safety', 'brain', 'magnetic', 'resonance', 'imaging', 'mri', 'activity', 'subjects', 'relapsing-remitting', 'multiple', 'sclerosis', 'rrms', 'oral', 'administration', 'ova', 'porcine', 'whipworm', 'trichuris', 'suis', 'tso', 'total', '16', 'disease-modifying', 'treatment', 'dmt', 'naive', 'rrms', 'subjects', 'studied', 'baseline', 'versus', 'treatment', 'bvt', 'controlled', 'prospective', 'study', 'mri', 'scans', 'performed', '5', 'months', 'screening-observation', '10', 'months', 'treatment', '4', 'months', 'post-treatment', 'surveillance', 'serious', 'symptoms', 'adverse', 'events', 'occurred', 'treatment', 'cohort', 'trend', 'consistent', '35', 'diminution', 'active', 'lesions', 'observation', 'mris', 'compared', 'treatment', 'mris', 'p', '0.08', 'level', 'individuals', '12', '16', 'subjects', 'improved', 'tso', 'treatment', 'regulatory', 'lymphocytes', 'increased', 'tso', 'treatment', 'tso', 'safe', 'rrms', 'subjects', 'potentially', 'favorable', 'mri', 'outcomes', 'immunoregulatory', 'changes', 'observed', 'tso', 'treatment', 'however', 'magnitude', 'effects', 'modest', 'considerable', 'variation', 'among', 'responses', 'individual', 'subjects']\n",
      "\n",
      "GASTROINTESTINAL PARASITIC INFECTIONS IN DEAD OR DEBILITATED MOOSE ( ALCES ALCES) IN SWEDEN.\n",
      "['objectives', 'determine', 'prevalence', 'intensity', 'gastrointestinal', 'parasites', 'dead', 'euthanized', 'emaciated', 'moose', 'central', 'southern', 'sweden', 'n50', 'assess', 'parasite', 'intensity', 'major', 'contributing', 'factor', 'poor', 'condition', 'moose', 'animals', 'infected', 'gastrointestinal', 'nematodes', 'seven', 'parasite', 'species', 'found', 'abomasa', '10', 'species', 'found', 'small', 'intestine', 'coinfections', 'commonly', 'found', 'abomasum', 'ostertagia', 'antipini', 'mazamastrongylus', 'dagestanica', 'small', 'intestine', 'nematodirella', 'alcidis', 'trichostrongylus', 'capricola', 'moose', 'many', 'nematodes', 'highest', 'numbers', '224,400', '11,760', 'abomasum', 'small', 'intestine', 'respectively', 'fourteen', 'moose', '40,000', 'gastrointestinal', 'nematodes', 'excluding', 'large', 'intestine', 'nematodes', 'represented', 'trichuris', 'spp', 'oesophagostomum', 'venulosum', 'additionally', 'moderate', 'prevalence', '36', 'protostrongylid', 'larvae', 'dorsal', 'spine', 'larvae', 'low', 'prevalence', '2-4', 'protozoal', 'infections', 'identified', 'microscopic', 'examination', 'feces', 'adult', 'moose', 'significantly', 'parasites', 'subadults', 'results', 'show', 'parasite', 'load', 'single', 'major', 'cause', 'moose', 'mortality', 'provided', 'update', 'species', 'composition', 'helminth', 'parasites', 'moose', 'sweden', 'illustrated', 'extreme', 'infection', 'intensities', 'free-ranging', 'moose']\n",
      "\n",
      "Isothermal diagnostic assays for the detection of soil-transmitted helminths based on the SmartAmp2 method.\n",
      "['diagnosis', 'soil-transmitted', 'helminths', 'sths', 'traditionally', 'relied', 'stool', 'microscopy', 'number', 'critical', 'deficiencies', 'molecular', 'diagnostics', 'powerful', 'tools', 'identify', 'closely', 'related', 'species', 'requirement', 'costly', 'equipment', 'makes', 'implementation', 'difficult', 'low-resource', 'field', 'settings', 'rapid', 'sensitive', 'cost-effective', 'diagnostic', 'tools', 'crucial', 'accurate', 'estimation', 'sth', 'infection', 'intensity', 'mda', 'programmes', 'goal', 'reduce', 'morbidity', 'following', 'repeated', 'rounds', 'chemotherapy', 'study', 'colourimetric', 'isothermal', 'assays', 'developed', 'using', 'smartamp2', 'primer', 'sets', 'reagents', 'loop-mediated', 'amplification', 'lamp', 'assays', 'species-specific', 'primer', 'sets', 'designed', 'specific', 'target', 'sequence', 'β-tubulin', 'gene', 'used', 'identify', 'necator', 'americanus', 'trichuris', 'trichiura', 'ascaris', 'lumbricoides', 'initial', 'optimization', 'control', 'plasmids', 'genomic', 'dna', 'adult', 'worms', 'assays', 'evaluated', 'field', 'samples', 'assays', 'showed', 'high', 'sensitivity', 'demonstrated', 'high', 'tolerance', 'inhibitors', 'spiked', 'faecal', 'samples', 'rapid', 'sensitive', 'colourimetric', 'assays', 'successfully', 'developed', 'identify', 'sths', 'field', 'samples', 'using', 'hydroxy', 'napthol', 'blue', 'hnb', 'dye', 'rapid', 'simple', 'colourimetric', 'diagnostic', 'assays', 'using', 'smartamp2', 'method', 'developed', 'potential', 'applied', 'field', 'detection', 'sth', 'infections', 'estimation', 'response', 'treatment', 'however', 'validation', 'large', 'numbers', 'field', 'samples', 'needed']\n",
      "\n"
     ]
    }
   ],
   "source": [
    "# Iterating through articles found for a search term of interest\n",
    "for art in words['whipworm']:\n",
    "    if(art['keywords'] == []):\n",
    "        continue\n",
    "        \n",
    "    print(art['title'])\n",
    "    print(art['words'])\n",
    "    print()"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "### Analyzing Words Data\n",
    "\n",
    "Further analysis depends mostly on what one wants to do with the collected data.\n",
    "\n",
    "For example, this might include building profiles for each search term, based on\n",
    "data in collected articles. It might also include using methods from natural language\n",
    "processing, such as vector embeddings and/or similarity measures.\n",
    "\n",
    "Specific analyses might also be interested in exploring historical patterns in the literature,\n",
    "examining, for example, the history of when certain topics were written about, and in what\n",
    "journals, by which authors.\n",
    "\n",
    "\n"
   ]
  }
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