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integration_tests.py
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integration_tests.py
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"""Integration tests for the development environment."""
__copyright__ = 'Copyright (c) 2019-2024, Utrecht University'
__license__ = 'GPLv3, see LICENSE'
__all__ = ['rule_run_integration_tests']
import json
import os
import re
import time
import traceback
import uuid
import data_access_token
import folder
import groups
import meta
import schema
from util import avu, collection, config, constants, data_object, group, jsonutil, log, msi, resources, rule, user
def _call_msvc_stat_vault(ctx, resc_name, data_path):
ret = msi.stat_vault(ctx, resc_name, data_path, '', '')
return (ret['arguments'][2], ret['arguments'][3])
def _call_msvc_stat_vault_check_exc(ctx, resc_name, data_path):
"""Verifies whether a call to the stat vault microservices raises an exception"""
try:
msi.stat_vault(ctx, resc_name, data_path, '', '')
return False
except Exception:
return True
def _call_msvc_json_arrayops(ctx, jsonstr, val, ops, index, argument_index):
"""Returns an output argument from the json_arrayops microservice"""
return ctx.msi_json_arrayops(jsonstr, val, ops, index)["arguments"][argument_index]
def _call_msvc_json_objops(ctx, jsonstr, val, ops, argument_index):
"""Returns an output argument from the json_objops microservice"""
result = ctx.msi_json_objops(jsonstr, val, ops)["arguments"]
if ops == "get":
return list(result[argument_index].key), list(result[argument_index].value)
else:
return result[argument_index]
def _create_tmp_object(ctx):
"""Creates a randomly named test data object and returns its name"""
path = "/{}/home/rods/{}.test".format(user.zone(ctx), str(uuid.uuid4()))
data_object.write(ctx, path, "test")
return path
def _create_tmp_collection(ctx):
"""Creates a randomly named test collection and returns its name"""
path = "/{}/home/rods/{}-test".format(user.zone(ctx), str(uuid.uuid4()))
collection.create(ctx, path)
return path
def _test_msvc_add_avu_object(ctx):
tmp_object = _create_tmp_object(ctx)
ctx.msi_add_avu('-d', tmp_object, "foo", "bar", "baz")
result = [(m.attr, m.value, m.unit) for m in avu.of_data(ctx, tmp_object)]
data_object.remove(ctx, tmp_object)
return result
def _test_msvc_add_avu_collection(ctx):
tmp_coll = _create_tmp_collection(ctx)
ctx.msi_add_avu('-c', tmp_coll, "foo", "bar", "baz")
result = [(m.attr, m.value, m.unit) for m in avu.of_coll(ctx, tmp_coll)]
collection.remove(ctx, tmp_coll)
return result
def _test_msvc_rmw_avu_object(ctx, rmw_attributes):
tmp_object = _create_tmp_object(ctx)
ctx.msi_add_avu('-d', tmp_object, "foo", "bar", "baz")
ctx.msi_add_avu('-d', tmp_object, "foot", "hand", "head")
ctx.msi_add_avu('-d', tmp_object, "aap", "noot", "mies")
ctx.msi_rmw_avu('-d', tmp_object, rmw_attributes[0], rmw_attributes[1], rmw_attributes[2])
result = [(m.attr, m.value, m.unit) for m in avu.of_data(ctx, tmp_object)]
data_object.remove(ctx, tmp_object)
return result
def _test_msvc_rmw_avu_collection(ctx, rmw_attributes):
tmp_object = _create_tmp_collection(ctx)
ctx.msi_add_avu('-c', tmp_object, "foo", "bar", "baz")
ctx.msi_add_avu('-c', tmp_object, "foot", "hand", "head")
ctx.msi_add_avu('-c', tmp_object, "aap", "noot", "mies")
ctx.msi_rmw_avu('-c', tmp_object, rmw_attributes[0], rmw_attributes[1], rmw_attributes[2])
result = [(m.attr, m.value, m.unit) for m in avu.of_coll(ctx, tmp_object)]
collection.remove(ctx, tmp_object)
return result
def _test_avu_set_collection(ctx, catch):
# Test setting avu with catch and without catch
tmp_object = _create_tmp_collection(ctx)
avu.set_on_coll(ctx, tmp_object, "foo", "bar", catch)
result = [(m.attr, m.value, m.unit) for m in avu.of_coll(ctx, tmp_object)]
collection.remove(ctx, tmp_object)
return result
def _test_avu_rmw_collection(ctx, rmw_attributes):
# Test removing with catch and without catch
tmp_object = _create_tmp_collection(ctx)
ctx.msi_add_avu('-c', tmp_object, "foo", "bar", "baz")
ctx.msi_add_avu('-c', tmp_object, "aap", "noot", "mies")
avu.rmw_from_coll(ctx, tmp_object, rmw_attributes[0], rmw_attributes[1], rmw_attributes[2], rmw_attributes[3])
result = [(m.attr, m.value, m.unit) for m in avu.of_coll(ctx, tmp_object)]
collection.remove(ctx, tmp_object)
return result
def _test_avu_get_attr_val_of_coll(ctx, attr, value):
# Test getting the value of an attribute on a collection
tmp_coll = _create_tmp_collection(ctx)
ctx.msi_add_avu('-c', tmp_coll, attr, value, "baz")
result = avu.get_attr_val_of_coll(ctx, tmp_coll, attr)
collection.remove(ctx, tmp_coll)
return result
def _test_avu_get_attr_val_of_coll_exception(ctx):
# Test that getting a non existing attribute on a collection raises an exception (True for exception raised)
tmp_coll = _create_tmp_collection(ctx)
result = False
try:
result = avu.get_attr_val_of_coll(ctx, tmp_coll, "foo")
except Exception:
result = True
collection.remove(ctx, tmp_coll)
return result
def _test_folder_set_retry_avus(ctx):
tmp_coll = _create_tmp_collection(ctx)
folder.folder_secure_set_retry_avus(ctx, tmp_coll, 2)
# Needed to be able to delete collection
msi.set_acl(ctx, "default", "admin:own", user.full_name(ctx), tmp_coll)
collection.remove(ctx, tmp_coll)
return True
def _test_msvc_apply_atomic_operations_collection(ctx):
tmp_coll = _create_tmp_collection(ctx)
operations = {
"entity_name": tmp_coll,
"entity_type": "collection",
"operations": [
{
"operation": "add",
"attribute": "aap",
"value": "noot",
"units": "mies"
},
{
"operation": "add",
"attribute": "foo",
"value": "bar",
"units": "baz"
},
{
"operation": "remove",
"attribute": "aap",
"value": "noot",
"units": "mies"
}
]
}
avu.apply_atomic_operations(ctx, operations)
result = [(m.attr, m.value, m.unit) for m in avu.of_coll(ctx, tmp_coll)]
collection.remove(ctx, tmp_coll)
return result
def _test_msvc_apply_atomic_operations_object(ctx):
tmp_object = _create_tmp_object(ctx)
operations = {
"entity_name": tmp_object,
"entity_type": "data_object",
"operations": [
{
"operation": "add",
"attribute": "aap",
"value": "noot",
"units": "mies"
},
{
"operation": "add",
"attribute": "foo",
"value": "bar",
"units": "baz"
},
{
"operation": "remove",
"attribute": "aap",
"value": "noot",
"units": "mies"
}
]
}
avu.apply_atomic_operations(ctx, operations)
result = [(m.attr, m.value, m.unit) for m in avu.of_data(ctx, tmp_object)]
data_object.remove(ctx, tmp_object)
return result
def _test_jsonutil_set_on_object_collection(ctx):
tmp_coll = _create_tmp_collection(ctx)
jsonutil.set_on_object(ctx, tmp_coll, "collection", "root", "{\"inspector\": \"gadget\"}")
result = [(m.attr, m.value, m.unit) for m in avu.of_coll(ctx, tmp_coll)]
collection.remove(ctx, tmp_coll)
return result
def _test_jsonutil_set_on_object_data_object(ctx):
tmp_object = _create_tmp_object(ctx)
jsonutil.set_on_object(ctx, tmp_object, "data_object", "root", "{\"inspector\": \"gadget\"}")
result = [(m.attr, m.value, m.unit) for m in avu.of_data(ctx, tmp_object)]
data_object.remove(ctx, tmp_object)
return result
def _test_folder_cronjob_status(ctx):
tmp_coll = _create_tmp_collection(ctx)
result_set = folder.set_cronjob_status(ctx, constants.CRONJOB_STATE['RETRY'], tmp_coll)
status = folder.get_cronjob_status(ctx, tmp_coll)
correct_status = status == constants.CRONJOB_STATE['RETRY']
result_rm = folder.rm_cronjob_status(ctx, tmp_coll)
collection.remove(ctx, tmp_coll)
return result_set, correct_status, result_rm
def _test_folder_set_get_last_run(ctx):
tmp_coll = _create_tmp_collection(ctx)
result = folder.set_last_run_time(ctx, tmp_coll)
found, last_run = folder.get_last_run_time(ctx, tmp_coll)
collection.remove(ctx, tmp_coll)
return result, found, last_run
def _test_groups_data(ctx):
test_vaultgroup = "vault-default-3"
ctx.msi_add_avu('-u', test_vaultgroup, "schema_id", "default-3", "")
groups_data = groups.internal_api_group_data(ctx)
avu.rmw_from_group(ctx, test_vaultgroup, "schema_id", "default-3", "")
group_names = [group
for catdata in groups_data['group_hierarchy'].values()
for subcatdata in catdata.values()
for group in subcatdata]
# We are checking here that the function still works if we have a
# vault group with a group attribute, that the vault group is not
# returned (since vault groups are not managed via the group manager
# module), and that data is returned for group manager managed groups.
return ("research-default-3" in group_names
and "datarequests-research-datamanagers" in group_names
and "grp-vault-test" in group_names
and "intake-test2" in group_names
and "deposit-pilot" in group_names
and "datamanager-test-automation" in group_names
and "vault-default-3" not in group_names)
def _test_schema_active_schema_deposit_from_default(ctx):
avu.rm_from_group(ctx, "deposit-pilot", "schema_id", "dag-0")
result = schema.get_active_schema_path(ctx, "/tempZone/home/deposit-pilot")
avu.associate_to_group(ctx, "deposit-pilot", "schema_id", "dag-0")
return result
def _test_schema_active_schema_research_from_default(ctx):
avu.rm_from_group(ctx, "research-core-2", "schema_id", "core-2")
result = schema.get_active_schema_path(ctx, "/tempZone/home/research-core-2")
avu.associate_to_group(ctx, "research-core-2", "schema_id", "core-2")
return result
def _test_schema_active_schema_vault_research_override(ctx):
avu.associate_to_group(ctx, "vault-core-2", "schema_id", "integration-test-schema-1")
result = schema.get_active_schema_path(ctx, "/tempZone/home/vault-core-2")
avu.rm_from_group(ctx, "vault-core-2", "schema_id", "integration-test-schema-1")
return result
def _test_schema_active_schema_vault_without_research(ctx):
ctx.uuGroupAdd("vault-without-research", "test-automation", "something", "", "", "", "", "", "", "")
result = schema.get_active_schema_path(ctx, "/tempZone/home/vault-without-research")
ctx.uuGroupRemove("vault-without-research", "", "")
return result
def _test_get_latest_vault_metadata_path_empty(ctx):
tmp_collection = _create_tmp_collection(ctx)
latest_file = meta.get_latest_vault_metadata_path(ctx, tmp_collection)
collection.remove(ctx, tmp_collection)
return latest_file is None
def _test_get_latest_vault_metadata_path_normal(ctx):
tmp_collection = _create_tmp_collection(ctx)
data_object.write(ctx, os.path.join(tmp_collection, "yoda-metadata[1722869873].json"), "test")
data_object.write(ctx, os.path.join(tmp_collection, "yoda-metadata[1722869875].json"), "test")
data_object.write(ctx, os.path.join(tmp_collection, "yoda-metadata[1722869877].json"), "test")
data_object.write(ctx, os.path.join(tmp_collection, "yoda-metadata[1722869876].json"), "test")
data_object.write(ctx, os.path.join(tmp_collection, "yoda-metadata[1722869874].json"), "test")
latest_file = meta.get_latest_vault_metadata_path(ctx, tmp_collection)
data_object.remove(ctx, os.path.join(tmp_collection, "yoda-metadata[1722869873].json"))
data_object.remove(ctx, os.path.join(tmp_collection, "yoda-metadata[1722869875].json"))
data_object.remove(ctx, os.path.join(tmp_collection, "yoda-metadata[1722869877].json"))
data_object.remove(ctx, os.path.join(tmp_collection, "yoda-metadata[1722869876].json"))
data_object.remove(ctx, os.path.join(tmp_collection, "yoda-metadata[1722869874].json"))
collection.remove(ctx, tmp_collection)
return latest_file == os.path.join(tmp_collection, "yoda-metadata[1722869877].json")
def _test_folder_secure_func(ctx, func):
"""Create tmp collection, apply func to it and get result, and clean up.
Used for testing functions that modify avu/acls related to folder secure.
Happy flow.
:param ctx: Combined type of a callback and rei struct
:param func: Function to test
:returns: Result of action
"""
tmp_coll = _create_tmp_collection(ctx)
# Assume returns True/False, or does not return
result = func(ctx, tmp_coll)
# Needed to be able to delete collection in situations where func changed ACLs
msi.set_acl(ctx, "default", "admin:own", user.full_name(ctx), tmp_coll)
collection.remove(ctx, tmp_coll)
if result is None:
return True
return result
basic_integration_tests = [
{"name": "msvc.add_avu_collection",
"test": lambda ctx: _test_msvc_add_avu_collection(ctx),
"check": lambda x: (("foo", "bar", "baz") in x and len(x) == 1)},
{"name": "msvc.add_avu_object",
"test": lambda ctx: _test_msvc_add_avu_object(ctx),
"check": lambda x: (("foo", "bar", "baz") in x
and len([a for a in x if a[0] not in ["org_replication_scheduled"]]) == 1
)},
{"name": "msvc.json_arrayops.add",
"test": lambda ctx: _call_msvc_json_arrayops(ctx, '["a", "b", "c"]', "d", "add", 0, 0),
"check": lambda x: x == '["a", "b", "c", "d"]'},
{"name": "msvc.json_arrayops.find_exist",
"test": lambda ctx: _call_msvc_json_arrayops(ctx, '["a", "b", "c"]', "b", "find", 0, 3),
"check": lambda x: x == 1},
{"name": "msvc.json_arrayops.find_notexist",
"test": lambda ctx: _call_msvc_json_arrayops(ctx, '["a", "b", "c"]', "d", "find", 0, 3),
"check": lambda x: x == -1},
{"name": "msvc.json_arrayops.get",
"test": lambda ctx: _call_msvc_json_arrayops(ctx, '["a", "b", "c"]', "", "get", 1, 1),
"check": lambda x: x == 'b'},
{"name": "msvc.json_arrayops.rm_exist",
"test": lambda ctx: _call_msvc_json_arrayops(ctx, '["a", "b", "c"]', "b", "rm", 0, 0),
"check": lambda x: x == '["a", "c"]'},
{"name": "msvc.json_arrayops.rm_notexist",
"test": lambda ctx: _call_msvc_json_arrayops(ctx, '["a", "b", "c"]', "d", "rm", 0, 0),
"check": lambda x: x == '["a", "b", "c"]'},
{"name": "msvc.json_arrayops.size",
"test": lambda ctx: _call_msvc_json_arrayops(ctx, '["a", "b", "c"]', "", "size", 0, 3),
"check": lambda x: x == 3},
{"name": "msvc.json_objops.add_notexist_empty",
"test": lambda ctx: _call_msvc_json_objops(ctx, '', msi.kvpair(ctx, "e", "f"), 'add', 0),
"check": lambda x: x == '{"e": "f"}'},
{"name": "msvc.json_objops.add_notexist_nonempty",
"test": lambda ctx: _call_msvc_json_objops(ctx, '{"a": "b"}', msi.kvpair(ctx, "e", "f"), 'add', 0),
"check": lambda x: x == '{"a": "b", "e": "f"}'},
{"name": "msvc.json_objops.add_exist_nonempty",
"test": lambda ctx: _call_msvc_json_objops(ctx, '{"a": "b"}', msi.kvpair(ctx, "e", "g"), 'add', 0),
"check": lambda x: x == '{"a": "b", "e": "g"}'},
{"name": "msvc.json_objops.get_exist",
"test": lambda ctx: _call_msvc_json_objops(ctx, '{"a": "b", "c": "d"}', msi.kvpair(ctx, "c", ""), 'get', 1),
"check": lambda x: str(x) == "(['c'], ['d'])"},
{"name": "msvc.json_objops.get_notexist",
"test": lambda ctx: _call_msvc_json_objops(ctx, '{"a": "b", "c": "d"}', msi.kvpair(ctx, "e", ""), 'get', 1),
"check": lambda x: str(x) == "(['e'], [''])"},
{"name": "msvc.json_objops.rm_exist",
"test": lambda ctx: _call_msvc_json_objops(ctx, '{"a": "b", "c": "d"}', msi.kvpair(ctx, "c", "d"), 'rm', 0),
"check": lambda x: x == '{"a": "b"}'},
{"name": "msvc.json_objops.rm_notexist",
"test": lambda ctx: _call_msvc_json_objops(ctx, '{"a": "b", "c": "d"}', msi.kvpair(ctx, "c", "e"), 'rm', 0),
"check": lambda x: x == '{"a": "b", "c": "d"}'},
{"name": "msvc.json_objops.set_notexist_empty",
"test": lambda ctx: _call_msvc_json_objops(ctx, '', msi.kvpair(ctx, "e", "f"), 'set', 0),
"check": lambda x: x == '{"e": "f"}'},
{"name": "msvc.json_objops.set_notexist_nonempty",
"test": lambda ctx: _call_msvc_json_objops(ctx, '{"a": "b"}', msi.kvpair(ctx, "e", "f"), 'set', 0),
"check": lambda x: x == '{"a": "b", "e": "f"}'},
{"name": "msvc.json_objops.set_exist_nonempty",
"test": lambda ctx: _call_msvc_json_objops(ctx, '{"a": "b"}', msi.kvpair(ctx, "e", "g"), 'set', 0),
"check": lambda x: x == '{"a": "b", "e": "g"}'},
{"name": "msvc.msi_vault_stat.file",
"test": lambda ctx: (_call_msvc_stat_vault(ctx, "dev001_1", "/var/lib/irods/Vault1_1/yoda/licenses/GNU General Public License v3.0.uri"),
_call_msvc_stat_vault(ctx, "dev001_2", "/var/lib/irods/Vault1_2/yoda/licenses/GNU General Public License v3.0.uri")),
"check": lambda x: (x[0][0] == "FILE" and x[0][1] == "45") or (x[1][0] == "FILE" and x[1][1] == "45")},
{"name": "msvc.msi_vault_stat.dir",
"test": lambda ctx: (_call_msvc_stat_vault(ctx, "dev001_1", "/var/lib/irods/Vault1_1/home"),
_call_msvc_stat_vault(ctx, "dev001_2", "/var/lib/irods/Vault1_2/home")),
"check": lambda x: (x[0][0] == "DIR" and x[0][1] == "0") or (x[1][0] == "DIR" and x[1][1] == "0")},
{"name": "msvc.msi_vault_stat.notexist",
"test": lambda ctx: _call_msvc_stat_vault(ctx, "dev001_1", "/var/lib/irods/Vault1_1/doesnotexist"),
"check": lambda x: x[0] == "NOTEXIST" and x[1] == "0"},
{"name": "msvc.msi_vault_stat.resourcenotexist",
"test": lambda ctx: _call_msvc_stat_vault_check_exc(ctx, "doesnotexist", "/var/lib/irods/Vault1_1/yoda/licenses/GNU General Public License v3.0.uri"),
"check": lambda x: x},
{"name": "msvc.msi_vault_stat.outsidevault1",
"test": lambda ctx: _call_msvc_stat_vault_check_exc(ctx, "dev001_1", "/etc/passwd"),
"check": lambda x: x},
{"name": "msvc.msi_vault_stat.outsidevault2",
"test": lambda ctx: _call_msvc_stat_vault_check_exc(ctx, "dev001_1", "/var/lib/irods/Vault1_2/yoda/licenses/GNU General Public License v3.0.uri"),
"check": lambda x: x},
{"name": "msvc.msi_file_checksum.file",
"test": lambda ctx: _call_file_checksum_either_resc(ctx, "/var/lib/irods/VaultX/yoda/licenses/GNU General Public License v3.0.txt"),
"check": lambda x: x == "sha2:OXLcl0T2SZ8Pmy2/dmlvKuetivmyPd5m1q+Gyd+zaYY="},
{"name": "msvc.msi_file_checksum.file_not_exist",
"test": lambda ctx: _call_file_checksum_check_exc(ctx, '/var/lib/irods/Vault1_2/yoda/licenses/doesnotexist.txt', 'dev001_2'),
"check": lambda x: x},
{"name": "msvc.msi_file_checksum.resc_not_exist",
"test": lambda ctx: _call_file_checksum_check_exc(ctx, '/var/lib/irods/Vault1_1/yoda/licenses/GNU General Public License v3.0.txt', 'non-existent-resource'),
"check": lambda x: x},
{"name": "msvc.msi_file_checksum.outside_vault",
"test": lambda ctx: _call_file_checksum_check_exc(ctx, '/etc/passwd', 'dev001_2'),
"check": lambda x: x},
{"name": "msvc.msi_dir_list.dir",
"test": lambda ctx: _call_dir_list(ctx, "/var/lib/irods/Vault1_1/yoda", "dev001_1"),
"check": lambda x: len(x) == len([entry for entry in os.listdir("/var/lib/irods/Vault1_1/yoda") if os.path.isdir("/var/lib/irods/Vault1_1/yoda/" + entry)])},
{"name": "msvc.msi_dir_list.dir_not_exist",
"test": lambda ctx: _call_dir_list_check_exc(ctx, '/var/lib/irods/Vault1_2/yoda/doesnotexist', 'dev001_2'),
"check": lambda x: x},
{"name": "msvc.msi_dir_list.file_resc_1",
"test": lambda ctx: _call_dir_list_check_exc(ctx, '/var/lib/irods/Vault1_1/yoda/licenses/GNU General Public License v3.0.txt', 'dev001_1'),
"check": lambda x: x},
{"name": "msvc.msi_dir_list.file_resc_2",
"test": lambda ctx: _call_dir_list_check_exc(ctx, '/var/lib/irods/Vault1_2/yoda/licenses/GNU General Public License v3.0.txt', 'dev001_2'),
"check": lambda x: x},
{"name": "msvc.msi_dir_list.resc_not_exist",
"test": lambda ctx: _call_dir_list_check_exc(ctx, '/var/lib/irods/Vault1_1/yoda', 'non-existent-resource'),
"check": lambda x: x},
{"name": "msvc.msi_dir_list.outside_vault",
"test": lambda ctx: _call_dir_list_check_exc(ctx, '/etc/passwd', 'dev001_2'),
"check": lambda x: x},
{"name": "msvc.rmw_avu_collection_literal",
"test": lambda ctx: _test_msvc_rmw_avu_collection(ctx, ("foo", "bar", "baz")),
"check": lambda x: (("aap", "noot", "mies") in x
and ("foot", "hand", "head") in x
and len(x) == 2)},
{"name": "msvc.rmw_avu_object_literal",
"test": lambda ctx: _test_msvc_rmw_avu_object(ctx, ("foo", "bar", "baz")),
"check": lambda x: (("aap", "noot", "mies") in x
and ("foot", "hand", "head") in x
and len([a for a in x if a[0] not in ["org_replication_scheduled"]]) == 2
)},
{"name": "msvc.rmw_avu_collection_literal_notexist",
"test": lambda ctx: _test_msvc_rmw_avu_collection(ctx, ("does", "not", "exist")),
"check": lambda x: (("aap", "noot", "mies") in x
and ("foo", "bar", "baz") in x
and ("foot", "hand", "head") in x
and len(x) == 3)},
{"name": "msvc.rmw_avu_object_literal_notexist",
"test": lambda ctx: _test_msvc_rmw_avu_object(ctx, ("does", "not", "exist")),
"check": lambda x: (("aap", "noot", "mies") in x
and ("foo", "bar", "baz") in x
and ("foot", "hand", "head") in x
and len([a for a in x if a[0] not in ["org_replication_scheduled"]]) == 3
)},
{"name": "msvc.rmw_avu_collection_wildcard",
"test": lambda ctx: _test_msvc_rmw_avu_collection(ctx, ("fo%", "%", "%")),
"check": lambda x: (("aap", "noot", "mies") in x
and len(x) == 1)},
{"name": "msvc.rmw_avu_object_wildcard",
"test": lambda ctx: _test_msvc_rmw_avu_object(ctx, ("fo%", "%", "%")),
"check": lambda x: (("aap", "noot", "mies") in x
and len([a for a in x if a[0] not in ["org_replication_scheduled"]]) == 1
)},
{"name": "avu.set_from_coll.catch.yes",
"test": lambda ctx: _test_avu_set_collection(ctx, True),
"check": lambda x: (("foo", "bar", "") in x
and len([a for a in x if a[0] not in ["org_replication_scheduled"]]) == 1
)},
{"name": "avu.set_from_coll.catch.no",
"test": lambda ctx: _test_avu_set_collection(ctx, False),
"check": lambda x: (("foo", "bar", "") in x
and len([a for a in x if a[0] not in ["org_replication_scheduled"]]) == 1
)},
{"name": "avu.rmw_from_coll_wildcard.catch.yes",
"test": lambda ctx: _test_avu_rmw_collection(ctx, ("foo", "%", True, "%")),
"check": lambda x: (("aap", "noot", "mies") in x
and len([a for a in x if a[0] not in ["org_replication_scheduled"]]) == 1
)},
{"name": "avu.rmw_from_coll_wildcard.catch.no",
"test": lambda ctx: _test_avu_rmw_collection(ctx, ("foo", "%", False, "%")),
"check": lambda x: (("aap", "noot", "mies") in x
and len([a for a in x if a[0] not in ["org_replication_scheduled"]]) == 1
)},
{"name": "avu.get_attr_val_of_coll.exists.yes",
"test": lambda ctx: _test_avu_get_attr_val_of_coll(ctx, "foo", "bar"),
"check": lambda x: x == "bar"},
{"name": "avu.get_attr_val_of_coll.exists.no",
"test": lambda ctx: _test_avu_get_attr_val_of_coll_exception(ctx),
"check": lambda x: x},
{"name": "avu.apply_atomic_operations.collection",
"test": lambda ctx: _test_msvc_apply_atomic_operations_collection(ctx),
"check": lambda x: (("foo", "bar", "baz") in x and len(x) == 1)},
{"name": "avu.apply_atomic_operations.data_object",
"test": lambda ctx: _test_msvc_apply_atomic_operations_object(ctx),
"check": lambda x: (("foo", "bar", "baz") in x
and len([a for a in x if a[0] not in ["org_replication_scheduled"]]) == 1
)},
{"name": "avu.apply_atomic_operations.invalid",
"test": lambda ctx: avu.apply_atomic_operations(ctx, {"inspector": "gadget"}),
"check": lambda x: not x},
{"name": "jsonutil.set_on_object.collection",
"test": lambda ctx: _test_jsonutil_set_on_object_collection(ctx),
"check": lambda x: (("inspector", "gadget", "root_0_s") in x and len(x) == 1)},
{"name": "jsonutil.set_on_object.data_object",
"test": lambda ctx: _test_jsonutil_set_on_object_data_object(ctx),
"check": lambda x: (("inspector", "gadget", "root_0_s") in x
and len([a for a in x if a[0] not in ["org_replication_scheduled"]]) == 1
)},
{"name": "data_access_token.get_all_tokens",
"test": lambda ctx: data_access_token.get_all_tokens(ctx),
"check": lambda x: isinstance(x, list)},
{"name": "folder.set_can_modify",
"test": lambda ctx: _test_folder_secure_func(ctx, folder.set_can_modify),
"check": lambda x: x},
{"name": "folder.cronjob_status",
"test": lambda ctx: _test_folder_cronjob_status(ctx),
"check": lambda x: x[0] and x[1] and x[2]},
{"name": "folder.set_get_last_run_time",
"test": lambda ctx: _test_folder_set_get_last_run(ctx),
"check": lambda x: x[0] and x[1] and x[2] + 25 >= int(time.time())},
{"name": "folder.set_last_run_time",
"test": lambda ctx: _test_folder_secure_func(ctx, folder.set_last_run_time),
"check": lambda x: x},
{"name": "folder.check_folder_secure",
"test": lambda ctx: _test_folder_secure_func(ctx, folder.check_folder_secure),
"check": lambda x: x},
{"name": "folder.folder_secure_fail",
"test": lambda ctx: _test_folder_secure_func(ctx, folder.folder_secure_fail),
"check": lambda x: x},
{"name": "folder.set_retry_avus",
"test": lambda ctx: _test_folder_set_retry_avus(ctx),
"check": lambda x: x},
{"name": "folder.determine_new_vault_target.research",
"test": lambda ctx: folder.determine_new_vault_target(ctx, "/tempZone/home/research-initial/testdata"),
"check": lambda x: re.match(r"^\/tempZone\/home\/vault-initial\/testdata\[[0-9]*\]$", x) is not None},
{"name": "folder.determine_new_vault_target.deposit",
"test": lambda ctx: folder.determine_new_vault_target(ctx, "/tempZone/home/deposit-pilot/deposit-hi[123123]"),
"check": lambda x: re.match(r"^\/tempZone\/home\/vault-pilot\/deposit-hi\[[0-9]*\]\[[0-9]*\]$", x) is not None},
{"name": "folder.determine_new_vault_target.invalid",
"test": lambda ctx: folder.determine_new_vault_target(ctx, "/tempZone/home/not-research-group-not-exist/folder-not-exist"),
"check": lambda x: x == ""},
{"name": "groups.getGroupsData",
"test": lambda ctx: _test_groups_data(ctx),
"check": lambda x: x},
{"name": "groups.rule_group_expiration_date_validate.1",
"test": lambda ctx: ctx.rule_group_expiration_date_validate("", ""),
"check": lambda x: x['arguments'][1] == 'true'},
{"name": "groups.rule_group_expiration_date_validate.2",
"test": lambda ctx: ctx.rule_group_expiration_date_validate(".", ""),
"check": lambda x: x['arguments'][1] == 'true'},
{"name": "groups.rule_group_expiration_date_validate.3",
"test": lambda ctx: ctx.rule_group_expiration_date_validate("abc", ""),
"check": lambda x: x['arguments'][1] == 'false'},
{"name": "groups.rule_group_expiration_date_validate.4",
"test": lambda ctx: ctx.rule_group_expiration_date_validate("2020-02-02", ""),
"check": lambda x: x['arguments'][1] == 'false'},
{"name": "groups.rule_group_expiration_date_validate.5",
"test": lambda ctx: ctx.rule_group_expiration_date_validate("2044-01-32", ""),
"check": lambda x: x['arguments'][1] == 'false'},
{"name": "groups.rule_group_expiration_date_validate.6",
"test": lambda ctx: ctx.rule_group_expiration_date_validate("2044-02-26", ""),
"check": lambda x: x['arguments'][1] == 'true'},
{"name": "meta.get_latest_vault_metadata_path.empty",
"test": lambda ctx: _test_get_latest_vault_metadata_path_empty(ctx),
"check": lambda x: x},
{"name": "meta.get_latest_vault_metadata_path.normal",
"test": lambda ctx: _test_get_latest_vault_metadata_path_normal(ctx),
"check": lambda x: x},
{"name": "policies.check_anonymous_access_allowed.local",
"test": lambda ctx: ctx.rule_check_anonymous_access_allowed("127.0.0.1", ""),
"check": lambda x: x['arguments'][1] == 'true'},
{"name": "policies.check_anonymous_access_allowed.remote",
"test": lambda ctx: ctx.rule_check_anonymous_access_allowed("1.2.3.4", ""),
"check": lambda x: x['arguments'][1] == 'false'},
{"name": "policies.check_max_connections_exceeded",
"test": lambda ctx: ctx.rule_check_max_connections_exceeded(""),
# This rule should always return 'false' for user 'rods'
"check": lambda x: x['arguments'][0] == 'false'},
{"name": "schema.get_active_schema_path.deposit",
"test": lambda ctx: schema.get_active_schema_path(ctx, "/tempZone/home/deposit-pilot"),
"check": lambda x: x == "/tempZone/yoda/schemas/dag-0/metadata.json"},
{"name": "schema.get_active_schema_path.deposit-from-default",
"test": lambda ctx: _test_schema_active_schema_deposit_from_default(ctx),
"check": lambda x: x == "/tempZone/yoda/schemas/default-3/metadata.json"},
{"name": "schema.get_active_schema_path.research",
"test": lambda ctx: schema.get_active_schema_path(ctx, "/tempZone/home/research-core-2"),
"check": lambda x: x == "/tempZone/yoda/schemas/core-2/metadata.json"},
{"name": "schema.get_active_schema_path.research-from-default",
"test": lambda ctx: _test_schema_active_schema_research_from_default(ctx),
"check": lambda x: x == "/tempZone/yoda/schemas/default-3/metadata.json"},
{"name": "schema.get_active_schema_path.vault-deposit",
"test": lambda ctx: schema.get_active_schema_path(ctx, "/tempZone/home/vault-pilot"),
"check": lambda x: x == "/tempZone/yoda/schemas/dag-0/metadata.json"},
{"name": "schema.get_active_schema_path.vault-research",
"test": lambda ctx: schema.get_active_schema_path(ctx, "/tempZone/home/vault-core-2"),
"check": lambda x: x == "/tempZone/yoda/schemas/core-2/metadata.json"},
{"name": "schema.get_active_schema_path.vault-research-override",
"test": lambda ctx: _test_schema_active_schema_vault_research_override(ctx),
"check": lambda x: x == "/tempZone/yoda/schemas/integration-test-schema-1/metadata.json"},
{"name": "schema.get_active_schema_path.vault-without-research",
"test": lambda ctx: _test_schema_active_schema_vault_without_research(ctx),
"check": lambda x: x == "/tempZone/yoda/schemas/default-3/metadata.json"},
# Vault metadata schema report: only check return value type, not contents
{"name": "schema_transformation.batch_vault_metadata_schema_report",
"test": lambda ctx: ctx.rule_batch_vault_metadata_schema_report(""),
"check": lambda x: isinstance(json.loads(x['arguments'][0]), dict)},
{"name": "util.collection.exists.yes",
"test": lambda ctx: collection.exists(ctx, "/tempZone/yoda"),
"check": lambda x: x},
{"name": "util.collection.exists.no",
"test": lambda ctx: collection.exists(ctx, "/tempZone/chewbacca"),
"check": lambda x: not x},
{"name": "util.collection.owner",
"test": lambda ctx: collection.owner(ctx, "/tempZone/yoda"),
"check": lambda x: x == ('rods', 'tempZone')},
{"name": "util.collection.to_from_id",
"test": lambda ctx: collection.name_from_id(ctx, collection.id_from_name(ctx, "/tempZone/home/research-initial")),
"check": lambda x: x == "/tempZone/home/research-initial"},
{"name": "util.data_object.exists.yes",
"test": lambda ctx: data_object.exists(ctx, "/tempZone/home/research-initial/testdata/lorem.txt"),
"check": lambda x: x},
{"name": "util.data_object.exists.no",
"test": lambda ctx: data_object.exists(ctx, "/tempZone/home/research-initial/testdata/doesnotexist.txt"),
"check": lambda x: not x},
{"name": "util.data_object.get_properties.by_data_name",
"test": lambda ctx: data_object.get_properties(ctx, data_object.id_from_path(ctx, "/tempZone/home/research-initial/testdata/lorem.txt"), "irodsResc"),
"check": lambda x: x["DATA_NAME"] == "lorem.txt"},
{"name": "util.data_object.get_properties.by_modify_time",
"test": lambda ctx: data_object.get_properties(ctx, data_object.id_from_path(ctx, "/tempZone/home/research-initial/testdata/lorem.txt"), "irodsResc"),
"check": lambda x: x["DATA_MODIFY_TIME"].isdigit()},
{"name": "util.data_object.get_properties.by_owner_name",
"test": lambda ctx: data_object.get_properties(ctx, data_object.id_from_path(ctx, "/tempZone/home/research-initial/testdata/lorem.txt"), "irodsResc"),
"check": lambda x: x["DATA_OWNER_NAME"] == "rods"},
{"name": "util.data_object.get_properties.by_coll_name",
"test": lambda ctx: data_object.get_properties(ctx, data_object.id_from_path(ctx, "/tempZone/home/research-initial/testdata/lorem.txt"), "irodsResc"),
"check": lambda x: x["COLL_NAME"] == "/tempZone/home/research-initial/testdata"},
{"name": "util.data_object.get_properties.by_coll_id",
"test": lambda ctx: data_object.get_properties(ctx, data_object.id_from_path(ctx, "/tempZone/home/research-initial/testdata/lorem.txt"), "irodsResc"),
"check": lambda x: x["COLL_ID"].isdigit()},
{"name": "util.data_object.get_properties.by_data_resc_hier",
"test": lambda ctx: data_object.get_properties(ctx, data_object.id_from_path(ctx, "/tempZone/home/research-initial/testdata/lorem.txt"), "irodsResc"),
"check": lambda x: x["DATA_RESC_HIER"].startswith('irodsResc')},
{"name": "util.data_object.get_properties.by_data_size",
"test": lambda ctx: data_object.get_properties(ctx, data_object.id_from_path(ctx, "/tempZone/home/research-initial/testdata/lorem.txt"), "irodsResc"),
"check": lambda x: x["DATA_SIZE"].isdigit()},
# Using the resource_id as data_id to ensure no existing data object uses this occupied identifier
{"name": "util.data_object.get_properties.no_data_object",
"test": lambda ctx: data_object.get_properties(ctx, resources.id_from_name(ctx, "irodsResc"), "irodsResc"),
"check": lambda x: x is None},
{"name": "util.data_object.owner",
"test": lambda ctx: data_object.owner(ctx, "/tempZone/home/research-initial/testdata/lorem.txt"),
"check": lambda x: x == ('rods', 'tempZone')},
{"name": "util.data_object.size",
"test": lambda ctx: data_object.size(ctx, "/tempZone/home/research-initial/testdata/lorem.txt"),
"check": lambda x: x == 1003240},
{"name": "util.data_object.to_from_id",
"test": lambda ctx: data_object.name_from_id(ctx, data_object.id_from_path(ctx, "/tempZone/home/research-initial/testdata/lorem.txt")),
"check": lambda x: x == "/tempZone/home/research-initial/testdata/lorem.txt"},
{"name": "util.data_object.get_group_owners",
"test": lambda ctx: data_object.get_group_owners(ctx, "/tempZone/home/research-initial/testdata/lorem.txt"),
"check": lambda x: x == [['research-initial', 'tempZone']]},
{"name": "util.group.exists.yes",
"test": lambda ctx: group.exists(ctx, "research-initial"),
"check": lambda x: x},
{"name": "util.group.exists.no",
"test": lambda ctx: group.exists(ctx, "research-doesnotexist"),
"check": lambda x: not x},
{"name": "util.group.get_category",
"test": lambda ctx: group.get_category(ctx, "research-initial"),
"check": lambda x: x == "test-automation"},
{"name": "util.group.is_member.yes",
"test": lambda ctx: group.is_member(ctx, "research-initial", "researcher"),
"check": lambda x: x},
{"name": "util.group.is_member.no",
"test": lambda ctx: group.is_member(ctx, "research-initial", "rods"),
"check": lambda x: not x},
{"name": "util.group.members.normal",
"test": lambda ctx: group.members(ctx, "research-initial"),
"check": lambda x: sorted([member for member in x]) == sorted([('functionaladminpriv', 'tempZone'), ('functionaladminpriv@yoda.test', 'tempZone'), ('groupmanager', 'tempZone'), ('groupmanager@yoda.test', 'tempZone'), ('researcher', 'tempZone'), ('researcher@yoda.test', 'tempZone')])},
{"name": "util.group.members.doesnotexist",
"test": lambda ctx: user.exists(ctx, "research-doesnotexist"),
"check": lambda x: x is False},
{"name": "util.resources.exists.yes",
"test": lambda ctx: resources.exists(ctx, "irodsResc"),
"check": lambda x: x},
{"name": "util.resources.exists.no",
"test": lambda ctx: resources.exists(ctx, "bananaResc"),
"check": lambda x: not x},
{"name": "util.resources.get_all_resource_names",
"test": lambda ctx: resources.get_all_resource_names(ctx),
"check": lambda x: len(x) == 15},
{"name": "util.resources.get_children_by_name",
"test": lambda ctx: resources.get_children_by_name(ctx, "dev001_p1"),
"check": lambda x: x == ["dev001_1"]},
{"name": "util.resources.get_parent_by_name",
"test": lambda ctx: resources.get_parent_by_name(ctx, "dev001_1"),
"check": lambda x: x == "dev001_p1"},
{"name": "util.resources.get_resource_names_by_type",
"test": lambda ctx: resources.get_resource_names_by_type(ctx, "unixfilesystem"),
"check": lambda x: sorted(x) == sorted(['bundleResc', 'dev001_1', 'dev001_2', 'dev002_1'])},
{"name": "util.resources.get_type_by_name",
"test": lambda ctx: resources.get_type_by_name(ctx, "dev001_1"),
"check": lambda x: x == "unixfilesystem"},
{"name": "util.resources.to_from_id",
"test": lambda ctx: resources.name_from_id(ctx, resources.id_from_name(ctx, "irodsResc")),
"check": lambda x: x == "irodsResc"},
{"name": "util.user.exists.yes",
"test": lambda ctx: user.exists(ctx, "rods"),
"check": lambda x: x},
{"name": "util.user.exists.no",
"test": lambda ctx: user.exists(ctx, "rododendron"),
"check": lambda x: not x},
{"name": "util.user.is_admin.yes",
"test": lambda ctx: user.is_admin(ctx, "rods"),
"check": lambda x: x},
{"name": "util.user.is_admin.no",
"test": lambda ctx: user.is_admin(ctx, "researcher"),
"check": lambda x: not x},
{"name": "util.user.is_member_of.yes",
"test": lambda ctx: user.is_member_of(ctx, "research-initial", "researcher"),
"check": lambda x: x},
{"name": "util.user.is_member_of.no",
"test": lambda ctx: user.is_member_of(ctx, "research-initial", "datamanager"),
"check": lambda x: not x},
{"name": "util.user.number_of_connection",
"test": lambda ctx: user.number_of_connections(ctx),
"check": lambda x: isinstance(x, int) and x > 0},
{"name": "util.user.usertype.rodsadmin",
"test": lambda ctx: user.user_type(ctx, "rods"),
"check": lambda x: x == "rodsadmin"},
{"name": "util.user.usertype.rodsuser",
"test": lambda ctx: user.user_type(ctx, "researcher"),
"check": lambda x: x == "rodsuser"},
]
@rule.make(inputs=[0], outputs=[1])
def rule_run_integration_tests(ctx, tests):
"""This function runs the integration tests. It must be run by
a rodsadmin user on a development environment. It assumes the standard
test data is present.
:param ctx: Combined type of a callback and rei struct
:param tests: Indicates which tests to run:
- Empty string means all tests
- String ending with '*' means all tests that start with a prefix, e.g. 'util.user.*'
- Otherwise the string should be the exact name of a test
:returns: string with test results. Each line has one test name and its verdict.
"""
return_value = ""
log.write(ctx, "Running")
if config.environment != "development":
log.write(ctx, "Error: integration tests can only run on development environment.")
return ""
if user.user_type(ctx) != 'rodsadmin':
log.write(ctx, "Error: integration tests can only be run by a rodsadmin user.")
return ""
for testconfig in basic_integration_tests:
name = testconfig["name"]
test = testconfig["test"]
check = testconfig["check"]
exception = False
if (tests != ""
and tests != name
and not (tests.endswith("*") and name.startswith(tests[0:-1]))):
continue
try:
result = test(ctx)
except BaseException:
log.write(ctx, "Basic integration test {} failed with Exception: {}".format(name, traceback.format_exc()))
exception = True
if exception:
verdict = "VERDICT_EXCEPTION"
elif check(result):
verdict = "VERDICT_OK "
else:
verdict = "VERDICT_FAILED (output '{}')".format(str(result))
return_value += name + " " + verdict + "\n"
return return_value
def _call_file_checksum_either_resc(ctx, filename):
"""Returns result of file checksum microservice for either of the
two main UFS resources (dev001_1, dev001_2). If one returns an
exception, we try the other.
:param ctx: combined type of a callback and rei struct
:param filename: name of file to checksum
:returns: output of file checksum microservice
"""
try:
vault_filename = filename.replace("VaultX", "Vault1_1")
ret = msi.file_checksum(ctx, vault_filename, 'dev001_1', '')
except Exception:
vault_filename = filename.replace("VaultX", "Vault1_2")
ret = msi.file_checksum(ctx, vault_filename, 'dev001_2', '')
return ret['arguments'][2]
def _call_file_checksum_check_exc(ctx, filename, resc_name):
"""Verifies whether a call to the file checksum microservice raises an exception"""
try:
msi.file_checksum(ctx, filename, resc_name, '')
return False
except Exception:
return True
def _call_dir_list(ctx, dirname, resc_name):
ret = msi.dir_list(ctx, dirname, resc_name, "")
print(ret['arguments'][2])
return json.loads(ret['arguments'][2])
def _call_dir_list_check_exc(ctx, dirname, resc_name):
try:
msi.dir_list(ctx, dirname, resc_name, "")
return False
except Exception:
return True