AMDock (Assisted Molecular Docking) is a user-friendly graphical tool to assist in the docking of protein-ligand complexes using Autodock-Vina or AutoDock4. This tool integrates several external programs for processing docking input files, define the search space (box) and perform docking under user’s supervision.
Version 1.5.x for Windows (Build 1.5.2)
DOCUMENTATION
Manual, tutorials and test files are located in Doc folder. (May be out of date. Please check the wiki)
Cite us
Valdes-Tresanco, M.S., Valdes-Tresanco, M.E., Valiente, P.A. and Moreno E. AMDock: a versatile graphical tool for assisting molecular docking with Autodock Vina and Autodock4. Biol Direct 15, 12 (2020). https://doi.org/10.1186/s13062-020-00267-2
INSTALL (Windows)
AMDock Windows version doesn´t need to be "installed". Just:
-unzip the *.zip file
and,
-run AMDock.exe
If you wish, you can create a program shortcut where you want or simply pin it to Start.
UNINSTALL
Just search the installation directory and delete it.
To view the update history, please check Changes_History file
TUTORIALS
Please, check the wiki https://github.com/Valdes-Tresanco-MS/AMDock-win/wiki
This project is possible thanks to the Open Source license of the JetBrains programs.