From 13e4f48122ee058022a77ea08c90aa20a6368e48 Mon Sep 17 00:00:00 2001 From: xnought Date: Wed, 7 Feb 2024 22:43:55 -0800 Subject: [PATCH 01/24] feat: add new template --- frontend-new/.gitignore | 24 + frontend-new/.vscode/extensions.json | 3 + frontend-new/README.md | 47 + frontend-new/index.html | 13 + frontend-new/package.json | 31 + frontend-new/postcss.config.cjs | 13 + frontend-new/public/vite.svg | 1 + frontend-new/src/App.svelte | 47 + frontend-new/src/app.pcss | 19 + frontend-new/src/assets/svelte.svg | 1 + frontend-new/src/lib/Counter.svelte | 10 + frontend-new/src/main.ts | 8 + frontend-new/src/vite-env.d.ts | 2 + frontend-new/svelte.config.js | 7 + frontend-new/tailwind.config.cjs | 38 + frontend-new/tsconfig.json | 20 + frontend-new/tsconfig.node.json | 9 + frontend-new/vite.config.ts | 7 + frontend-new/yarn.lock | 1564 ++++++++++++++++++++++++++ 19 files changed, 1864 insertions(+) create mode 100644 frontend-new/.gitignore create mode 100644 frontend-new/.vscode/extensions.json create mode 100644 frontend-new/README.md create mode 100644 frontend-new/index.html create mode 100644 frontend-new/package.json create mode 100644 frontend-new/postcss.config.cjs create mode 100644 frontend-new/public/vite.svg create mode 100644 frontend-new/src/App.svelte create mode 100644 frontend-new/src/app.pcss create mode 100644 frontend-new/src/assets/svelte.svg create mode 100644 frontend-new/src/lib/Counter.svelte create mode 100644 frontend-new/src/main.ts create mode 100644 frontend-new/src/vite-env.d.ts create mode 100644 frontend-new/svelte.config.js create mode 100644 frontend-new/tailwind.config.cjs create mode 100644 frontend-new/tsconfig.json create mode 100644 frontend-new/tsconfig.node.json create mode 100644 frontend-new/vite.config.ts create mode 100644 frontend-new/yarn.lock diff --git a/frontend-new/.gitignore b/frontend-new/.gitignore new file mode 100644 index 00000000..a547bf36 --- /dev/null +++ b/frontend-new/.gitignore @@ -0,0 +1,24 @@ +# Logs +logs +*.log +npm-debug.log* +yarn-debug.log* +yarn-error.log* +pnpm-debug.log* +lerna-debug.log* + +node_modules +dist +dist-ssr +*.local + +# Editor directories and files +.vscode/* +!.vscode/extensions.json +.idea +.DS_Store +*.suo +*.ntvs* +*.njsproj +*.sln +*.sw? diff --git a/frontend-new/.vscode/extensions.json b/frontend-new/.vscode/extensions.json new file mode 100644 index 00000000..bdef8201 --- /dev/null +++ b/frontend-new/.vscode/extensions.json @@ -0,0 +1,3 @@ +{ + "recommendations": ["svelte.svelte-vscode"] +} diff --git a/frontend-new/README.md b/frontend-new/README.md new file mode 100644 index 00000000..e6cd94fc --- /dev/null +++ b/frontend-new/README.md @@ -0,0 +1,47 @@ +# Svelte + TS + Vite + +This template should help get you started developing with Svelte and TypeScript in Vite. + +## Recommended IDE Setup + +[VS Code](https://code.visualstudio.com/) + [Svelte](https://marketplace.visualstudio.com/items?itemName=svelte.svelte-vscode). + +## Need an official Svelte framework? + +Check out [SvelteKit](https://github.com/sveltejs/kit#readme), which is also powered by Vite. Deploy anywhere with its serverless-first approach and adapt to various platforms, with out of the box support for TypeScript, SCSS, and Less, and easily-added support for mdsvex, GraphQL, PostCSS, Tailwind CSS, and more. + +## Technical considerations + +**Why use this over SvelteKit?** + +- It brings its own routing solution which might not be preferable for some users. +- It is first and foremost a framework that just happens to use Vite under the hood, not a Vite app. + +This template contains as little as possible to get started with Vite + TypeScript + Svelte, while taking into account the developer experience with regards to HMR and intellisense. It demonstrates capabilities on par with the other `create-vite` templates and is a good starting point for beginners dipping their toes into a Vite + Svelte project. + +Should you later need the extended capabilities and extensibility provided by SvelteKit, the template has been structured similarly to SvelteKit so that it is easy to migrate. + +**Why `global.d.ts` instead of `compilerOptions.types` inside `jsconfig.json` or `tsconfig.json`?** + +Setting `compilerOptions.types` shuts out all other types not explicitly listed in the configuration. Using triple-slash references keeps the default TypeScript setting of accepting type information from the entire workspace, while also adding `svelte` and `vite/client` type information. + +**Why include `.vscode/extensions.json`?** + +Other templates indirectly recommend extensions via the README, but this file allows VS Code to prompt the user to install the recommended extension upon opening the project. + +**Why enable `allowJs` in the TS template?** + +While `allowJs: false` would indeed prevent the use of `.js` files in the project, it does not prevent the use of JavaScript syntax in `.svelte` files. In addition, it would force `checkJs: false`, bringing the worst of both worlds: not being able to guarantee the entire codebase is TypeScript, and also having worse typechecking for the existing JavaScript. In addition, there are valid use cases in which a mixed codebase may be relevant. + +**Why is HMR not preserving my local component state?** + +HMR state preservation comes with a number of gotchas! It has been disabled by default in both `svelte-hmr` and `@sveltejs/vite-plugin-svelte` due to its often surprising behavior. You can read the details [here](https://github.com/rixo/svelte-hmr#svelte-hmr). + +If you have state that's important to retain within a component, consider creating an external store which would not be replaced by HMR. + +```ts +// store.ts +// An extremely simple external store +import { writable } from 'svelte/store' +export default writable(0) +``` diff --git a/frontend-new/index.html b/frontend-new/index.html new file mode 100644 index 00000000..b6c5f0af --- /dev/null +++ b/frontend-new/index.html @@ -0,0 +1,13 @@ + + + + + + + Vite + Svelte + TS + + +
+ + + diff --git a/frontend-new/package.json b/frontend-new/package.json new file mode 100644 index 00000000..6aa94c75 --- /dev/null +++ b/frontend-new/package.json @@ -0,0 +1,31 @@ +{ + "name": "frontend-new", + "private": true, + "version": "0.0.0", + "type": "module", + "scripts": { + "dev": "vite", + "build": "vite build", + "preview": "vite preview", + "check": "svelte-check --tsconfig ./tsconfig.json" + }, + "devDependencies": { + "@sveltejs/vite-plugin-svelte": "^3.0.1", + "@tsconfig/svelte": "^5.0.2", + "autoprefixer": "^10.4.16", + "flowbite": "^2.2.1", + "flowbite-svelte": "^0.44.22", + "flowbite-svelte-icons": "^1.3.1", + "postcss": "^8.4.32", + "postcss-load-config": "^5.0.2", + "svelte": "^4.2.8", + "svelte-check": "^3.6.2", + "tailwindcss": "^3.3.6", + "tslib": "^2.6.2", + "typescript": "^5.2.2", + "vite": "^5.0.8" + }, + "dependencies": { + "svelte-routing": "^2.11.0" + } +} diff --git a/frontend-new/postcss.config.cjs b/frontend-new/postcss.config.cjs new file mode 100644 index 00000000..e48cff58 --- /dev/null +++ b/frontend-new/postcss.config.cjs @@ -0,0 +1,13 @@ +const tailwindcss = require("tailwindcss"); +const autoprefixer = require("autoprefixer"); + +const config = { + plugins: [ + //Some plugins, like tailwindcss/nesting, need to run before Tailwind, + tailwindcss(), + //But others, like autoprefixer, need to run after, + autoprefixer, + ], +}; + +module.exports = config; diff --git a/frontend-new/public/vite.svg b/frontend-new/public/vite.svg new file mode 100644 index 00000000..e7b8dfb1 --- /dev/null +++ b/frontend-new/public/vite.svg @@ -0,0 +1 @@ + \ No newline at end of file diff --git a/frontend-new/src/App.svelte b/frontend-new/src/App.svelte new file mode 100644 index 00000000..e8b590f1 --- /dev/null +++ b/frontend-new/src/App.svelte @@ -0,0 +1,47 @@ + + +
+
+ + + + + + +
+

Vite + Svelte

+ +
+ +
+ +

+ Check out SvelteKit, the official Svelte app framework powered by Vite! +

+ +

+ Click on the Vite and Svelte logos to learn more +

+
+ + diff --git a/frontend-new/src/app.pcss b/frontend-new/src/app.pcss new file mode 100644 index 00000000..52a7c514 --- /dev/null +++ b/frontend-new/src/app.pcss @@ -0,0 +1,19 @@ +@tailwind base; + +:root { + --darkblue-hsl: 205, 57%, 23%; + --darkblue: hsla(var(--darkblue-hsl), 1); + + --lightblue-hsl: 198, 41%, 54%; + --lightblue: hsla(var(--lightblue-hsl), 1); + + --darkorange-hsl: 27, 77%, 55%; + --darkorange: hsla(var(--darkorange-hsl), 1); + + --lightorange-hsl: 38, 83%, 60%; + --lightorange: hsla(var(--lightorange-hsl), 1); +} + +@tailwind components; + +@tailwind utilities; diff --git a/frontend-new/src/assets/svelte.svg b/frontend-new/src/assets/svelte.svg new file mode 100644 index 00000000..c5e08481 --- /dev/null +++ b/frontend-new/src/assets/svelte.svg @@ -0,0 +1 @@ + \ No newline at end of file diff --git a/frontend-new/src/lib/Counter.svelte b/frontend-new/src/lib/Counter.svelte new file mode 100644 index 00000000..979b4dfc --- /dev/null +++ b/frontend-new/src/lib/Counter.svelte @@ -0,0 +1,10 @@ + + + diff --git a/frontend-new/src/main.ts b/frontend-new/src/main.ts new file mode 100644 index 00000000..33051857 --- /dev/null +++ b/frontend-new/src/main.ts @@ -0,0 +1,8 @@ +import "./app.pcss"; +import App from "./App.svelte"; + +const app = new App({ + target: document.getElementById("app"), +}); + +export default app; diff --git a/frontend-new/src/vite-env.d.ts b/frontend-new/src/vite-env.d.ts new file mode 100644 index 00000000..4078e747 --- /dev/null +++ b/frontend-new/src/vite-env.d.ts @@ -0,0 +1,2 @@ +/// +/// diff --git a/frontend-new/svelte.config.js b/frontend-new/svelte.config.js new file mode 100644 index 00000000..66b603fe --- /dev/null +++ b/frontend-new/svelte.config.js @@ -0,0 +1,7 @@ +import { vitePreprocess } from "@sveltejs/vite-plugin-svelte"; + +export default { + // Consult https://svelte.dev/docs#compile-time-svelte-preprocess + // for more information about preprocessors + preprocess: [vitePreprocess({})], +}; diff --git a/frontend-new/tailwind.config.cjs b/frontend-new/tailwind.config.cjs new file mode 100644 index 00000000..2e4e4fcc --- /dev/null +++ b/frontend-new/tailwind.config.cjs @@ -0,0 +1,38 @@ +const config = { + content: [ + "./src/**/*.{html,js,svelte,ts}", + "./node_modules/flowbite-svelte/**/*.{html,js,svelte,ts}", + ], + + plugins: [require("flowbite/plugin")], + + darkMode: "class", + + theme: { + extend: { + colors: { + // flowbite-svelte + primary: { + // TODO: actually interpolate lightness here + 50: "hsla(205, 57%, 23%, 1)", + 100: "hsla(205, 57%, 23%, 1)", + 200: "hsla(205, 57%, 23%, 1)", + 300: "hsla(205, 57%, 23%, 1)", + 400: "hsla(205, 57%, 23%, 1)", + 500: "hsla(205, 57%, 23%, 1)", + 600: "hsla(205, 57%, 23%, 1)", + 700: "hsla(205, 57%, 23%, 1)", + 800: "hsla(205, 57%, 23%, 1)", + 900: "hsla(205, 57%, 23%, 1)", + }, + // then match the css global variables defined in .postcss file + darkblue: "hsla(205, 57%, 23%, 1)", + lightblue: "hsla(198, 41%, 54%, 1)", + darkorange: "hsla(27, 77%, 55%, 1)", + lightorange: "hsla(38, 83%, 60%, 1)", + }, + }, + }, +}; + +module.exports = config; diff --git a/frontend-new/tsconfig.json b/frontend-new/tsconfig.json new file mode 100644 index 00000000..5fb548f2 --- /dev/null +++ b/frontend-new/tsconfig.json @@ -0,0 +1,20 @@ +{ + "extends": "@tsconfig/svelte/tsconfig.json", + "compilerOptions": { + "target": "ESNext", + "useDefineForClassFields": true, + "module": "ESNext", + "resolveJsonModule": true, + /** + * Typecheck JS in `.svelte` and `.js` files by default. + * Disable checkJs if you'd like to use dynamic types in JS. + * Note that setting allowJs false does not prevent the use + * of JS in `.svelte` files. + */ + "allowJs": true, + "checkJs": true, + "isolatedModules": true + }, + "include": ["src/**/*.ts", "src/**/*.js", "src/**/*.svelte"], + "references": [{ "path": "./tsconfig.node.json" }] +} diff --git a/frontend-new/tsconfig.node.json b/frontend-new/tsconfig.node.json new file mode 100644 index 00000000..494bfe08 --- /dev/null +++ b/frontend-new/tsconfig.node.json @@ -0,0 +1,9 @@ +{ + "compilerOptions": { + "composite": true, + "skipLibCheck": true, + "module": "ESNext", + "moduleResolution": "bundler" + }, + "include": ["vite.config.ts"] +} diff --git a/frontend-new/vite.config.ts b/frontend-new/vite.config.ts new file mode 100644 index 00000000..d7019694 --- /dev/null +++ b/frontend-new/vite.config.ts @@ -0,0 +1,7 @@ +import { defineConfig } from 'vite' +import { svelte } from '@sveltejs/vite-plugin-svelte' + +// https://vitejs.dev/config/ +export default defineConfig({ + plugins: [svelte()], +}) diff --git a/frontend-new/yarn.lock b/frontend-new/yarn.lock new file mode 100644 index 00000000..f4815260 --- /dev/null +++ b/frontend-new/yarn.lock @@ -0,0 +1,1564 @@ +# THIS IS AN AUTOGENERATED FILE. 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sha512-l4Sp/DRseor9wL6EvV2+TuQn63dMkPjZ/sp9XkghTEbV9KlPS1xUsZ3u7/IQO4wxtcFB4bgpQPRcR3QCvezPcQ== + +yaml@^2.3.4: + version "2.3.4" + resolved "https://registry.yarnpkg.com/yaml/-/yaml-2.3.4.tgz#53fc1d514be80aabf386dc6001eb29bf3b7523b2" + integrity sha512-8aAvwVUSHpfEqTQ4w/KMlf3HcRdt50E5ODIQJBw1fQ5RL34xabzxtUlzTXVqc4rkZsPbvrXKWnABCD7kWSmocA== From bb007acecf12361e2bd6777c49b381e693764899 Mon Sep 17 00:00:00 2001 From: xnought Date: Wed, 7 Feb 2024 22:46:11 -0800 Subject: [PATCH 02/24] feat: add fonts --- frontend-new/package.json | 2 + frontend-new/src/app.pcss | 106 +++++++++++++++++++++++++++++++++++++- frontend-new/yarn.lock | 10 ++++ 3 files changed, 116 insertions(+), 2 deletions(-) diff --git a/frontend-new/package.json b/frontend-new/package.json index 6aa94c75..76242f1f 100644 --- a/frontend-new/package.json +++ b/frontend-new/package.json @@ -10,6 +10,8 @@ "check": "svelte-check --tsconfig ./tsconfig.json" }, "devDependencies": { + "@fontsource-variable/inter": "^5.0.16", + "@fontsource/fira-mono": "^5.0.8", "@sveltejs/vite-plugin-svelte": "^3.0.1", "@tsconfig/svelte": "^5.0.2", "autoprefixer": "^10.4.16", diff --git a/frontend-new/src/app.pcss b/frontend-new/src/app.pcss index 52a7c514..e9ab60a4 100644 --- a/frontend-new/src/app.pcss +++ b/frontend-new/src/app.pcss @@ -1,4 +1,9 @@ +@import "@fontsource/fira-mono"; +@import "@fontsource-variable/inter"; + @tailwind base; +@tailwind components; +@tailwind utilities; :root { --darkblue-hsl: 205, 57%, 23%; @@ -12,8 +17,105 @@ --lightorange-hsl: 38, 83%, 60%; --lightorange: hsla(var(--lightorange-hsl), 1); + + --font-body: "Inter Variable", sans-serif; + --font-mono: "Fira Mono", monospace; + --color-bg-0: rgb(202, 216, 228); + --color-bg-1: hsl(209, 36%, 86%); + --color-bg-2: hsl(224, 44%, 95%); + --color-text: rgb(69, 64, 60); + --column-width: 42rem; + --column-margin-top: 4rem; + font-family: var(--font-body); + color: var(--color-text); } -@tailwind components; +html { + scroll-behavior: smooth; +} -@tailwind utilities; +/* when I href an id and it scrolls to an element, highlight it momentarily */ +:target { + animation: target-fade 1s; +} +@keyframes target-fade { + from { + background-color: var(--lightblue); + } + to { + background-color: transparent; + } +} + +body { + margin: 0; +} + +h1 { + margin-top: 5px; + font-size: 1.8rem; +} + +h2 { + margin-top: 3px; + font-size: 1.5rem; +} + +h3 { + margin-top: 2px; + font-weight: bold; +} + +p { + line-height: 1.5; +} + +a { + color: var(--lightblue); +} + +a:hover { + text-decoration: underline; +} + +pre { + font-size: 16px; + font-family: var(--font-mono); + background-color: rgba(255, 255, 255, 0.45); + border-radius: 3px; + box-shadow: 2px 2px 6px rgb(255 255 255 / 25%); + padding: 0.5em; + overflow-x: auto; + color: var(--color-text); +} + +.text-column { + display: flex; + max-width: 48rem; + flex: 0.6; + flex-direction: column; + justify-content: center; + margin: 0 auto; +} + +input, +button { + font-size: inherit; + font-family: inherit; +} + +button:focus:not(:focus-visible) { + outline: none; +} + +.visually-hidden { + border: 0; + clip: rect(0 0 0 0); + height: auto; + margin: 0; + overflow: hidden; + padding: 0; + position: absolute; + width: 1px; + white-space: nowrap; +} diff --git a/frontend-new/yarn.lock b/frontend-new/yarn.lock index f4815260..fd2fa6a7 100644 --- a/frontend-new/yarn.lock +++ b/frontend-new/yarn.lock @@ -157,6 +157,16 @@ resolved "https://registry.yarnpkg.com/@floating-ui/utils/-/utils-0.2.1.tgz#16308cea045f0fc777b6ff20a9f25474dd8293d2" integrity sha512-9TANp6GPoMtYzQdt54kfAyMmz1+osLlXdg2ENroU7zzrtflTLrrC/lgrIfaSe+Wu0b89GKccT7vxXA0MoAIO+Q== +"@fontsource-variable/inter@^5.0.16": + version "5.0.16" + resolved "https://registry.yarnpkg.com/@fontsource-variable/inter/-/inter-5.0.16.tgz#14ee7fac425222aede9b57795a19532e7b687679" + integrity sha512-k+BUNqksTL+AN+o+OV7ILeiE9B5M5X+/jA7LWvCwjbV9ovXTqZyKRhA/x7uYv/ml8WQ0XNLBM7cRFIx4jW0/hg== + +"@fontsource/fira-mono@^5.0.8": + version "5.0.8" + resolved "https://registry.yarnpkg.com/@fontsource/fira-mono/-/fira-mono-5.0.8.tgz#3222020d963e71890f244333cdf98755c919eff6" + integrity sha512-8OJiUK2lzJjvDlkmamEfhtpL1cyFApg1Pk4kE5Pw5UTf1ETF3Yy/pprgwV5I+LQPDjuFvinsinT9xSUZ2b/zuQ== + "@isaacs/cliui@^8.0.2": version "8.0.2" resolved "https://registry.yarnpkg.com/@isaacs/cliui/-/cliui-8.0.2.tgz#b37667b7bc181c168782259bab42474fbf52b550" From b3dbc503fc5d62acd33436d3dd3d31c3d9955026 Mon Sep 17 00:00:00 2001 From: xnought Date: Wed, 7 Feb 2024 23:16:19 -0800 Subject: [PATCH 03/24] feat: use svelte-routing --- frontend-new/index.html | 22 ++++---- frontend-new/src/App.svelte | 65 +++++++-------------- frontend-new/src/app.pcss | 7 ++- frontend-new/src/assets/svelte.svg | 1 - frontend-new/src/images/dummy.png | Bin 0 -> 22688 bytes frontend-new/src/images/github.svg | 16 ++++++ frontend-new/src/images/logo.svg | 28 +++++++++ frontend-new/src/lib/Header.svelte | 75 +++++++++++++++++++++++++ frontend-new/src/main.ts | 2 +- frontend-new/src/routes/Error.svelte | 9 +++ frontend-new/src/routes/Home.svelte | 9 +++ frontend-new/src/routes/Login.svelte | 9 +++ frontend-new/src/routes/Protein.svelte | 9 +++ frontend-new/src/routes/Search.svelte | 9 +++ frontend-new/src/routes/Upload.svelte | 0 15 files changed, 202 insertions(+), 59 deletions(-) delete mode 100644 frontend-new/src/assets/svelte.svg create mode 100644 frontend-new/src/images/dummy.png create mode 100644 frontend-new/src/images/github.svg create mode 100644 frontend-new/src/images/logo.svg create mode 100644 frontend-new/src/lib/Header.svelte create mode 100644 frontend-new/src/routes/Error.svelte create mode 100644 frontend-new/src/routes/Home.svelte create mode 100644 frontend-new/src/routes/Login.svelte create mode 100644 frontend-new/src/routes/Protein.svelte create mode 100644 frontend-new/src/routes/Search.svelte create mode 100644 frontend-new/src/routes/Upload.svelte diff --git a/frontend-new/index.html b/frontend-new/index.html index b6c5f0af..b6afc9ef 100644 --- a/frontend-new/index.html +++ b/frontend-new/index.html @@ -1,13 +1,13 @@ - + - - - - - Vite + Svelte + TS - - -
- - + + + + + Vite + Svelte + TS + + +
+ + diff --git a/frontend-new/src/App.svelte b/frontend-new/src/App.svelte index e8b590f1..9a28d6ee 100644 --- a/frontend-new/src/App.svelte +++ b/frontend-new/src/App.svelte @@ -1,47 +1,24 @@ -
- -

Vite + Svelte

- -
- -
- -

- Check out SvelteKit, the official Svelte app framework powered by Vite! -

- -

- Click on the Vite and Svelte logos to learn more -

-
- - + + +
+ + + + + + +
+ diff --git a/frontend-new/src/app.pcss b/frontend-new/src/app.pcss index e9ab60a4..64866d6a 100644 --- a/frontend-new/src/app.pcss +++ b/frontend-new/src/app.pcss @@ -2,8 +2,6 @@ @import "@fontsource-variable/inter"; @tailwind base; -@tailwind components; -@tailwind utilities; :root { --darkblue-hsl: 205, 57%, 23%; @@ -17,7 +15,9 @@ --lightorange-hsl: 38, 83%, 60%; --lightorange: hsla(var(--lightorange-hsl), 1); +} +:root { --font-body: "Inter Variable", sans-serif; --font-mono: "Fira Mono", monospace; --color-bg-0: rgb(202, 216, 228); @@ -119,3 +119,6 @@ button:focus:not(:focus-visible) { width: 1px; white-space: nowrap; } + +@tailwind components; +@tailwind utilities; diff --git a/frontend-new/src/assets/svelte.svg b/frontend-new/src/assets/svelte.svg deleted file mode 100644 index c5e08481..00000000 --- a/frontend-new/src/assets/svelte.svg +++ /dev/null @@ -1 +0,0 @@ - \ No newline at end of file diff --git a/frontend-new/src/images/dummy.png b/frontend-new/src/images/dummy.png 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zwFozFpZ+W+hlN!%8P83uHPa>y;NbA+a*ByH*?RzJ9*jA33TT3$%r}b0+slN!d-{L0 zUohh{=d*r%hzL6Fju6N728mJUok&Brlhx|49Bj$?K5H9X-Z$LdIQr_t1z7&D<4HhX z3x}Jz{9gpR|8L{&{}$XKdhgdJKKI}+hJv;39^xnZFaX!L{?|qPKu5y>TB~jo_CF4; BSHA!N literal 0 HcmV?d00001 diff --git a/frontend-new/src/images/github.svg b/frontend-new/src/images/github.svg new file mode 100644 index 00000000..bc5d249d --- /dev/null +++ b/frontend-new/src/images/github.svg @@ -0,0 +1,16 @@ + + + + \ No newline at end of file diff --git a/frontend-new/src/images/logo.svg b/frontend-new/src/images/logo.svg new file mode 100644 index 00000000..3a19cfa9 --- /dev/null +++ b/frontend-new/src/images/logo.svg @@ -0,0 +1,28 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/frontend-new/src/lib/Header.svelte b/frontend-new/src/lib/Header.svelte new file mode 100644 index 00000000..877dd749 --- /dev/null +++ b/frontend-new/src/lib/Header.svelte @@ -0,0 +1,75 @@ + + +
+
+ +
+ Search + + Upload +
+
+ + + Login +
+
+ + diff --git a/frontend-new/src/main.ts b/frontend-new/src/main.ts index 33051857..01b6fc5f 100644 --- a/frontend-new/src/main.ts +++ b/frontend-new/src/main.ts @@ -2,7 +2,7 @@ import "./app.pcss"; import App from "./App.svelte"; const app = new App({ - target: document.getElementById("app"), + target: document.getElementById("app"), }); export default app; diff --git a/frontend-new/src/routes/Error.svelte b/frontend-new/src/routes/Error.svelte new file mode 100644 index 00000000..7a877f51 --- /dev/null +++ b/frontend-new/src/routes/Error.svelte @@ -0,0 +1,9 @@ + + +
Error this url doesn't exist
+ + diff --git a/frontend-new/src/routes/Home.svelte b/frontend-new/src/routes/Home.svelte new file mode 100644 index 00000000..7507cd1e --- /dev/null +++ b/frontend-new/src/routes/Home.svelte @@ -0,0 +1,9 @@ + + +
home
+ + diff --git a/frontend-new/src/routes/Login.svelte b/frontend-new/src/routes/Login.svelte new file mode 100644 index 00000000..2c7681fd --- /dev/null +++ b/frontend-new/src/routes/Login.svelte @@ -0,0 +1,9 @@ + + +
login
+ + diff --git a/frontend-new/src/routes/Protein.svelte b/frontend-new/src/routes/Protein.svelte new file mode 100644 index 00000000..25aad815 --- /dev/null +++ b/frontend-new/src/routes/Protein.svelte @@ -0,0 +1,9 @@ + + +
protein {id}
+ + diff --git a/frontend-new/src/routes/Search.svelte b/frontend-new/src/routes/Search.svelte new file mode 100644 index 00000000..17a372c9 --- /dev/null +++ b/frontend-new/src/routes/Search.svelte @@ -0,0 +1,9 @@ + + +
search
+ + diff --git a/frontend-new/src/routes/Upload.svelte b/frontend-new/src/routes/Upload.svelte new file mode 100644 index 00000000..e69de29b From 937d4d53800e770b75d1caa2ecb8ecba29e22bf7 Mon Sep 17 00:00:00 2001 From: xnought Date: Wed, 7 Feb 2024 23:22:00 -0800 Subject: [PATCH 04/24] feat: override the old with new --- frontend-new/.gitignore | 24 - frontend-new/package.json | 33 - frontend-new/postcss.config.cjs | 13 - frontend-new/src/lib/Counter.svelte | 10 - frontend-new/src/routes/Upload.svelte | 0 frontend-new/svelte.config.js | 7 - frontend-new/tsconfig.json | 20 - frontend-new/vite.config.ts | 7 - {frontend => frontend-old}/.dockerignore | 0 frontend-old/.gitignore | 12 + {frontend => frontend-old}/.npmrc | 0 {frontend => frontend-old}/.prettierignore | 0 {frontend => frontend-old}/.prettierrc | 0 {frontend => frontend-old}/Dockerfile | 0 frontend-old/package.json | 46 + frontend-old/postcss.config.cjs | 13 + {frontend => frontend-old}/src/app.d.ts | 0 {frontend => frontend-old}/src/app.html | 0 {frontend => frontend-old}/src/app.postcss | 0 .../src/lib/ArticleEditor.svelte | 0 frontend-old/src/lib/Counter.svelte | 25 + .../src/lib/DelayedSpinner.svelte | 0 .../src/lib/EntryCard.svelte | 0 .../src/lib/ListProteins.svelte | 0 .../src/lib/Markdown.svelte | 0 .../src/lib/ProteinVis.svelte | 0 .../src/lib/RangerFilter.svelte | 0 .../src/lib/References.svelte | 0 .../src/lib/SimilarProteins.svelte | 0 {frontend => frontend-old}/src/lib/backend.ts | 0 .../src/lib/customStores.ts | 0 {frontend => frontend-old}/src/lib/format.ts | 0 .../src/lib}/images/dummy.png | Bin .../src/lib}/images/github.svg | 0 .../src/lib}/images/logo.svg | 0 .../src/openapi/core/ApiError.ts | 0 .../src/openapi/core/ApiRequestOptions.ts | 0 .../src/openapi/core/ApiResult.ts | 0 .../src/openapi/core/CancelablePromise.ts | 0 .../src/openapi/core/OpenAPI.ts | 0 .../src/openapi/core/request.ts | 0 .../src/openapi/index.ts | 0 .../src/openapi/models/EditBody.ts | 0 .../src/openapi/models/HTTPValidationError.ts | 0 .../src/openapi/models/LoginBody.ts | 0 .../src/openapi/models/LoginResponse.ts | 0 .../src/openapi/models/ProteinEntry.ts | 0 .../src/openapi/models/RangeFilter.ts | 0 .../src/openapi/models/SearchProteinsBody.ts | 0 .../openapi/models/SearchProteinsResults.ts | 0 .../src/openapi/models/UploadBody.ts | 0 .../src/openapi/models/UploadError.ts | 0 .../src/openapi/models/ValidationError.ts | 0 .../src/openapi/services/DefaultService.ts | 0 .../src/routes/+layout.svelte | 0 .../src/routes/+page.svelte | 0 .../src/routes/+page.ts | 0 .../src/routes/Header.svelte | 0 .../src/routes/about/+page.svelte | 0 .../routes/edit/[proteinName]/+page.svelte | 0 .../src/routes/edit/[proteinName]/+page.ts | 0 .../src/routes/login/+page.svelte | 0 .../routes/protein/[proteinName]/+page.svelte | 0 .../src/routes/protein/[proteinName]/+page.ts | 0 .../src/routes/search/+page.svelte | 0 .../src/routes/styles.css | 0 .../src/routes/upload/+page.svelte | 0 .../src/tests/example.test.ts | 0 {frontend => frontend-old}/static/favicon.png | Bin {frontend => frontend-old}/static/robots.txt | 0 frontend-old/svelte.config.js | 18 + .../tailwind.config.cjs | 0 frontend-old/tsconfig.json | 17 + frontend-old/vite.config.ts | 9 + {frontend-new => frontend-old}/yarn.lock | 1540 ++++++++++------- frontend/.gitignore | 34 +- .../.vscode/extensions.json | 0 {frontend-new => frontend}/README.md | 0 {frontend-new => frontend}/index.html | 0 frontend/package.json | 75 +- frontend/postcss.config.cjs | 12 +- {frontend-new => frontend}/public/vite.svg | 0 frontend/src/App.svelte | 5 + .../App.svelte => frontend/src/Router.svelte | 0 {frontend-new => frontend}/src/app.pcss | 0 frontend/src/{lib => }/images/dummy.png | Bin frontend/src/{lib => }/images/github.svg | 0 frontend/src/{lib => }/images/logo.svg | 0 frontend/src/lib/Counter.svelte | 31 +- .../src/lib/Header.svelte | 0 {frontend-new => frontend}/src/main.ts | 0 .../src/routes/Error.svelte | 0 .../src/routes/Home.svelte | 0 .../src/routes/Login.svelte | 0 .../src/routes/Protein.svelte | 0 .../src/routes/Search.svelte | 0 frontend/src/routes/Upload.svelte | 9 + {frontend-new => frontend}/src/vite-env.d.ts | 0 frontend/svelte.config.js | 21 +- frontend/tsconfig.json | 33 +- {frontend-new => frontend}/tsconfig.node.json | 0 frontend/vite.config.ts | 12 +- frontend/yarn.lock | 1540 +++++++---------- 103 files changed, 1790 insertions(+), 1776 deletions(-) delete mode 100644 frontend-new/.gitignore delete mode 100644 frontend-new/package.json delete mode 100644 frontend-new/postcss.config.cjs delete mode 100644 frontend-new/src/lib/Counter.svelte delete mode 100644 frontend-new/src/routes/Upload.svelte delete mode 100644 frontend-new/svelte.config.js delete mode 100644 frontend-new/tsconfig.json delete mode 100644 frontend-new/vite.config.ts rename {frontend => frontend-old}/.dockerignore (100%) create mode 100644 frontend-old/.gitignore rename {frontend => frontend-old}/.npmrc (100%) rename {frontend => frontend-old}/.prettierignore (100%) rename {frontend => frontend-old}/.prettierrc (100%) rename {frontend => frontend-old}/Dockerfile (100%) create mode 100644 frontend-old/package.json create mode 100644 frontend-old/postcss.config.cjs rename {frontend => frontend-old}/src/app.d.ts (100%) rename {frontend => frontend-old}/src/app.html (100%) rename {frontend => frontend-old}/src/app.postcss (100%) rename {frontend => frontend-old}/src/lib/ArticleEditor.svelte (100%) create mode 100644 frontend-old/src/lib/Counter.svelte rename {frontend => frontend-old}/src/lib/DelayedSpinner.svelte (100%) rename {frontend => frontend-old}/src/lib/EntryCard.svelte (100%) rename {frontend => frontend-old}/src/lib/ListProteins.svelte (100%) rename {frontend => frontend-old}/src/lib/Markdown.svelte (100%) rename {frontend => frontend-old}/src/lib/ProteinVis.svelte (100%) rename {frontend => frontend-old}/src/lib/RangerFilter.svelte (100%) rename {frontend => frontend-old}/src/lib/References.svelte (100%) rename {frontend => frontend-old}/src/lib/SimilarProteins.svelte (100%) rename {frontend => frontend-old}/src/lib/backend.ts (100%) rename {frontend => frontend-old}/src/lib/customStores.ts (100%) rename {frontend => frontend-old}/src/lib/format.ts (100%) rename {frontend-new/src => frontend-old/src/lib}/images/dummy.png (100%) rename {frontend-new/src => frontend-old/src/lib}/images/github.svg (100%) rename {frontend-new/src => frontend-old/src/lib}/images/logo.svg (100%) rename {frontend => frontend-old}/src/openapi/core/ApiError.ts (100%) rename {frontend => frontend-old}/src/openapi/core/ApiRequestOptions.ts (100%) rename {frontend => frontend-old}/src/openapi/core/ApiResult.ts (100%) rename {frontend => frontend-old}/src/openapi/core/CancelablePromise.ts (100%) rename {frontend => frontend-old}/src/openapi/core/OpenAPI.ts (100%) rename {frontend => frontend-old}/src/openapi/core/request.ts (100%) rename {frontend => frontend-old}/src/openapi/index.ts (100%) rename {frontend => frontend-old}/src/openapi/models/EditBody.ts (100%) rename {frontend => frontend-old}/src/openapi/models/HTTPValidationError.ts (100%) rename {frontend => frontend-old}/src/openapi/models/LoginBody.ts (100%) rename {frontend => frontend-old}/src/openapi/models/LoginResponse.ts (100%) rename {frontend => frontend-old}/src/openapi/models/ProteinEntry.ts (100%) rename {frontend => frontend-old}/src/openapi/models/RangeFilter.ts (100%) rename {frontend => frontend-old}/src/openapi/models/SearchProteinsBody.ts (100%) rename {frontend => frontend-old}/src/openapi/models/SearchProteinsResults.ts (100%) rename {frontend => frontend-old}/src/openapi/models/UploadBody.ts (100%) rename {frontend => frontend-old}/src/openapi/models/UploadError.ts (100%) rename {frontend => frontend-old}/src/openapi/models/ValidationError.ts (100%) rename {frontend => frontend-old}/src/openapi/services/DefaultService.ts (100%) rename {frontend => frontend-old}/src/routes/+layout.svelte (100%) rename {frontend => frontend-old}/src/routes/+page.svelte (100%) rename {frontend => frontend-old}/src/routes/+page.ts (100%) rename {frontend => frontend-old}/src/routes/Header.svelte (100%) rename {frontend => frontend-old}/src/routes/about/+page.svelte (100%) rename {frontend => frontend-old}/src/routes/edit/[proteinName]/+page.svelte (100%) rename {frontend => frontend-old}/src/routes/edit/[proteinName]/+page.ts (100%) rename {frontend => frontend-old}/src/routes/login/+page.svelte (100%) rename {frontend => frontend-old}/src/routes/protein/[proteinName]/+page.svelte (100%) rename {frontend => frontend-old}/src/routes/protein/[proteinName]/+page.ts (100%) rename {frontend => frontend-old}/src/routes/search/+page.svelte (100%) rename {frontend => frontend-old}/src/routes/styles.css (100%) rename {frontend => frontend-old}/src/routes/upload/+page.svelte (100%) rename {frontend => frontend-old}/src/tests/example.test.ts (100%) rename {frontend => frontend-old}/static/favicon.png (100%) rename {frontend => frontend-old}/static/robots.txt (100%) create mode 100644 frontend-old/svelte.config.js rename {frontend-new => frontend-old}/tailwind.config.cjs (100%) create mode 100644 frontend-old/tsconfig.json create mode 100644 frontend-old/vite.config.ts rename {frontend-new => frontend-old}/yarn.lock (50%) rename {frontend-new => frontend}/.vscode/extensions.json (100%) rename {frontend-new => frontend}/README.md (100%) rename {frontend-new => frontend}/index.html (100%) rename {frontend-new => frontend}/public/vite.svg (100%) create mode 100644 frontend/src/App.svelte rename frontend-new/src/App.svelte => frontend/src/Router.svelte (100%) rename {frontend-new => frontend}/src/app.pcss (100%) rename frontend/src/{lib => }/images/dummy.png (100%) rename frontend/src/{lib => }/images/github.svg (100%) rename frontend/src/{lib => }/images/logo.svg (100%) rename {frontend-new => frontend}/src/lib/Header.svelte (100%) rename {frontend-new => frontend}/src/main.ts (100%) rename {frontend-new => frontend}/src/routes/Error.svelte (100%) rename {frontend-new => frontend}/src/routes/Home.svelte (100%) rename {frontend-new => frontend}/src/routes/Login.svelte (100%) rename {frontend-new => frontend}/src/routes/Protein.svelte (100%) rename {frontend-new => frontend}/src/routes/Search.svelte (100%) create mode 100644 frontend/src/routes/Upload.svelte rename {frontend-new => frontend}/src/vite-env.d.ts (100%) rename {frontend-new => frontend}/tsconfig.node.json (100%) diff --git a/frontend-new/.gitignore b/frontend-new/.gitignore deleted file mode 100644 index a547bf36..00000000 --- a/frontend-new/.gitignore +++ /dev/null @@ -1,24 +0,0 @@ -# Logs -logs -*.log -npm-debug.log* -yarn-debug.log* -yarn-error.log* -pnpm-debug.log* -lerna-debug.log* - -node_modules -dist -dist-ssr -*.local - -# Editor directories and files -.vscode/* -!.vscode/extensions.json -.idea -.DS_Store -*.suo -*.ntvs* -*.njsproj -*.sln -*.sw? diff --git a/frontend-new/package.json b/frontend-new/package.json deleted file mode 100644 index 76242f1f..00000000 --- a/frontend-new/package.json +++ /dev/null @@ -1,33 +0,0 @@ -{ - "name": "frontend-new", - "private": true, - "version": "0.0.0", - "type": "module", - "scripts": { - "dev": "vite", - "build": "vite build", - "preview": "vite preview", - "check": "svelte-check --tsconfig ./tsconfig.json" - }, - "devDependencies": { - "@fontsource-variable/inter": "^5.0.16", - "@fontsource/fira-mono": "^5.0.8", - "@sveltejs/vite-plugin-svelte": "^3.0.1", - "@tsconfig/svelte": "^5.0.2", - "autoprefixer": "^10.4.16", - "flowbite": "^2.2.1", - "flowbite-svelte": "^0.44.22", - "flowbite-svelte-icons": "^1.3.1", - "postcss": "^8.4.32", - "postcss-load-config": "^5.0.2", - "svelte": "^4.2.8", - "svelte-check": "^3.6.2", - "tailwindcss": "^3.3.6", - "tslib": "^2.6.2", - "typescript": "^5.2.2", - "vite": "^5.0.8" - }, - "dependencies": { - "svelte-routing": "^2.11.0" - } -} diff --git a/frontend-new/postcss.config.cjs b/frontend-new/postcss.config.cjs deleted file mode 100644 index e48cff58..00000000 --- a/frontend-new/postcss.config.cjs +++ /dev/null @@ -1,13 +0,0 @@ -const tailwindcss = require("tailwindcss"); -const autoprefixer = require("autoprefixer"); - -const config = { - plugins: [ - //Some plugins, like tailwindcss/nesting, need to run before Tailwind, - tailwindcss(), - //But others, like autoprefixer, need to run after, - autoprefixer, - ], -}; - -module.exports = config; diff --git a/frontend-new/src/lib/Counter.svelte b/frontend-new/src/lib/Counter.svelte deleted file mode 100644 index 979b4dfc..00000000 --- a/frontend-new/src/lib/Counter.svelte +++ /dev/null @@ -1,10 +0,0 @@ - - - diff --git a/frontend-new/src/routes/Upload.svelte b/frontend-new/src/routes/Upload.svelte deleted file mode 100644 index e69de29b..00000000 diff --git a/frontend-new/svelte.config.js b/frontend-new/svelte.config.js deleted file mode 100644 index 66b603fe..00000000 --- a/frontend-new/svelte.config.js +++ /dev/null @@ -1,7 +0,0 @@ -import { vitePreprocess } from "@sveltejs/vite-plugin-svelte"; - -export default { - // Consult https://svelte.dev/docs#compile-time-svelte-preprocess - // for more information about preprocessors - preprocess: [vitePreprocess({})], -}; diff --git a/frontend-new/tsconfig.json b/frontend-new/tsconfig.json deleted file mode 100644 index 5fb548f2..00000000 --- a/frontend-new/tsconfig.json +++ /dev/null @@ -1,20 +0,0 @@ -{ - "extends": "@tsconfig/svelte/tsconfig.json", - "compilerOptions": { - "target": "ESNext", - "useDefineForClassFields": true, - "module": "ESNext", - "resolveJsonModule": true, - /** - * Typecheck JS in `.svelte` and `.js` files by default. - * Disable checkJs if you'd like to use dynamic types in JS. - * Note that setting allowJs false does not prevent the use - * of JS in `.svelte` files. - */ - "allowJs": true, - "checkJs": true, - "isolatedModules": true - }, - "include": ["src/**/*.ts", "src/**/*.js", "src/**/*.svelte"], - "references": [{ "path": "./tsconfig.node.json" }] -} diff --git a/frontend-new/vite.config.ts b/frontend-new/vite.config.ts deleted file mode 100644 index d7019694..00000000 --- a/frontend-new/vite.config.ts +++ /dev/null @@ -1,7 +0,0 @@ -import { defineConfig } from 'vite' -import { svelte } from '@sveltejs/vite-plugin-svelte' - -// https://vitejs.dev/config/ -export default defineConfig({ - plugins: [svelte()], -}) diff --git a/frontend/.dockerignore b/frontend-old/.dockerignore similarity index 100% rename from frontend/.dockerignore rename to frontend-old/.dockerignore diff --git a/frontend-old/.gitignore b/frontend-old/.gitignore new file mode 100644 index 00000000..8f6c617e --- /dev/null +++ b/frontend-old/.gitignore @@ -0,0 +1,12 @@ +.DS_Store +node_modules +/build +/.svelte-kit +/package +.env +.env.* +!.env.example +.vercel +.output +vite.config.js.timestamp-* +vite.config.ts.timestamp-* diff --git a/frontend/.npmrc b/frontend-old/.npmrc similarity index 100% rename from frontend/.npmrc rename to frontend-old/.npmrc diff --git a/frontend/.prettierignore b/frontend-old/.prettierignore similarity index 100% rename from frontend/.prettierignore rename to frontend-old/.prettierignore diff --git a/frontend/.prettierrc b/frontend-old/.prettierrc similarity index 100% rename from frontend/.prettierrc rename to frontend-old/.prettierrc diff --git a/frontend/Dockerfile b/frontend-old/Dockerfile similarity index 100% rename from frontend/Dockerfile rename to frontend-old/Dockerfile diff --git a/frontend-old/package.json b/frontend-old/package.json new file mode 100644 index 00000000..bc38ade8 --- /dev/null +++ b/frontend-old/package.json @@ -0,0 +1,46 @@ +{ + "name": "venome", + "version": "0.0.1", + "scripts": { + "dev": "vite dev", + "build": "vite build", + "preview": "vite preview", + "check": "svelte-kit sync && svelte-check --tsconfig ./tsconfig.json", + "check:watch": "svelte-kit sync && svelte-check --tsconfig ./tsconfig.json --watch", + "test": "vitest run", + "lint": "prettier --plugin-search-dir . --check .", + "format": "prettier --plugin-search-dir . --write .", + "openapi": "npx openapi-typescript-codegen --input http://localhost:8000/openapi.json --output ./src/openapi --client fetch" + }, + "devDependencies": { + "@fontsource-variable/inter": "^5.0.16", + "@fontsource/fira-mono": "^4.5.10", + "@neoconfetti/svelte": "^1.0.0", + "@sveltejs/adapter-auto": "^2.0.0", + "@sveltejs/kit": "^1.20.4", + "@types/cookie": "^0.5.1", + "@types/js-cookie": "^3.0.6", + "autoprefixer": "^10.4.14", + "flowbite": "^2.1.1", + "flowbite-svelte": "^0.44.19", + "flowbite-svelte-icons": "^0.4.5", + "openapi-typescript-codegen": "^0.25.0", + "postcss": "^8.4.24", + "postcss-load-config": "^4.0.1", + "prettier": "^2.8.0", + "prettier-plugin-svelte": "^2.10.1", + "svelte": "^4.0.5", + "svelte-check": "^3.4.3", + "tailwindcss": "^3.3.2", + "tslib": "^2.4.1", + "typescript": "^5.0.0", + "vite": "^4.4.2", + "vitest": "^0.34.0" + }, + "type": "module", + "dependencies": { + "bibtex": "^0.9.0", + "js-cookie": "^3.0.5", + "marked": "^10.0.0" + } +} diff --git a/frontend-old/postcss.config.cjs b/frontend-old/postcss.config.cjs new file mode 100644 index 00000000..e68d4de2 --- /dev/null +++ b/frontend-old/postcss.config.cjs @@ -0,0 +1,13 @@ +const tailwindcss = require("tailwindcss"); +const autoprefixer = require("autoprefixer"); + +const config = { + plugins: [ + //Some plugins, like tailwindcss/nesting, need to run before Tailwind, + tailwindcss(), + //But others, like autoprefixer, need to run after, + autoprefixer, + ], +}; + +module.exports = config; diff --git a/frontend/src/app.d.ts b/frontend-old/src/app.d.ts similarity index 100% rename from frontend/src/app.d.ts rename to frontend-old/src/app.d.ts diff --git a/frontend/src/app.html b/frontend-old/src/app.html similarity index 100% rename from frontend/src/app.html rename to frontend-old/src/app.html diff --git a/frontend/src/app.postcss b/frontend-old/src/app.postcss similarity index 100% rename from frontend/src/app.postcss rename to frontend-old/src/app.postcss diff --git a/frontend/src/lib/ArticleEditor.svelte b/frontend-old/src/lib/ArticleEditor.svelte similarity index 100% rename from frontend/src/lib/ArticleEditor.svelte rename to frontend-old/src/lib/ArticleEditor.svelte diff --git a/frontend-old/src/lib/Counter.svelte b/frontend-old/src/lib/Counter.svelte new file mode 100644 index 00000000..37810d02 --- /dev/null +++ b/frontend-old/src/lib/Counter.svelte @@ -0,0 +1,25 @@ + + +
+ Count is {count} +
+ + + + + diff --git a/frontend/src/lib/DelayedSpinner.svelte b/frontend-old/src/lib/DelayedSpinner.svelte similarity index 100% rename from frontend/src/lib/DelayedSpinner.svelte rename to frontend-old/src/lib/DelayedSpinner.svelte diff --git a/frontend/src/lib/EntryCard.svelte b/frontend-old/src/lib/EntryCard.svelte similarity index 100% rename from frontend/src/lib/EntryCard.svelte rename to frontend-old/src/lib/EntryCard.svelte diff --git a/frontend/src/lib/ListProteins.svelte b/frontend-old/src/lib/ListProteins.svelte similarity index 100% rename from frontend/src/lib/ListProteins.svelte rename to frontend-old/src/lib/ListProteins.svelte diff --git a/frontend/src/lib/Markdown.svelte b/frontend-old/src/lib/Markdown.svelte similarity index 100% rename from frontend/src/lib/Markdown.svelte rename to frontend-old/src/lib/Markdown.svelte diff --git a/frontend/src/lib/ProteinVis.svelte b/frontend-old/src/lib/ProteinVis.svelte similarity index 100% rename from frontend/src/lib/ProteinVis.svelte rename to frontend-old/src/lib/ProteinVis.svelte diff --git a/frontend/src/lib/RangerFilter.svelte b/frontend-old/src/lib/RangerFilter.svelte similarity index 100% rename from frontend/src/lib/RangerFilter.svelte rename to frontend-old/src/lib/RangerFilter.svelte diff --git a/frontend/src/lib/References.svelte b/frontend-old/src/lib/References.svelte similarity index 100% rename from frontend/src/lib/References.svelte rename to frontend-old/src/lib/References.svelte diff --git a/frontend/src/lib/SimilarProteins.svelte b/frontend-old/src/lib/SimilarProteins.svelte similarity index 100% rename from frontend/src/lib/SimilarProteins.svelte rename to frontend-old/src/lib/SimilarProteins.svelte diff --git a/frontend/src/lib/backend.ts b/frontend-old/src/lib/backend.ts similarity index 100% rename from frontend/src/lib/backend.ts rename to frontend-old/src/lib/backend.ts diff --git a/frontend/src/lib/customStores.ts b/frontend-old/src/lib/customStores.ts similarity index 100% rename from frontend/src/lib/customStores.ts rename to frontend-old/src/lib/customStores.ts diff --git a/frontend/src/lib/format.ts b/frontend-old/src/lib/format.ts similarity index 100% rename from frontend/src/lib/format.ts rename to frontend-old/src/lib/format.ts diff --git a/frontend-new/src/images/dummy.png b/frontend-old/src/lib/images/dummy.png similarity index 100% rename from frontend-new/src/images/dummy.png rename to frontend-old/src/lib/images/dummy.png diff --git a/frontend-new/src/images/github.svg b/frontend-old/src/lib/images/github.svg similarity index 100% rename from frontend-new/src/images/github.svg rename to frontend-old/src/lib/images/github.svg diff --git a/frontend-new/src/images/logo.svg b/frontend-old/src/lib/images/logo.svg similarity index 100% rename from frontend-new/src/images/logo.svg rename to frontend-old/src/lib/images/logo.svg diff --git a/frontend/src/openapi/core/ApiError.ts b/frontend-old/src/openapi/core/ApiError.ts similarity index 100% rename from frontend/src/openapi/core/ApiError.ts rename to frontend-old/src/openapi/core/ApiError.ts diff --git a/frontend/src/openapi/core/ApiRequestOptions.ts b/frontend-old/src/openapi/core/ApiRequestOptions.ts similarity index 100% rename from frontend/src/openapi/core/ApiRequestOptions.ts rename to frontend-old/src/openapi/core/ApiRequestOptions.ts diff --git a/frontend/src/openapi/core/ApiResult.ts b/frontend-old/src/openapi/core/ApiResult.ts similarity index 100% rename from frontend/src/openapi/core/ApiResult.ts rename to frontend-old/src/openapi/core/ApiResult.ts diff --git a/frontend/src/openapi/core/CancelablePromise.ts b/frontend-old/src/openapi/core/CancelablePromise.ts similarity index 100% rename from frontend/src/openapi/core/CancelablePromise.ts rename to frontend-old/src/openapi/core/CancelablePromise.ts diff --git a/frontend/src/openapi/core/OpenAPI.ts b/frontend-old/src/openapi/core/OpenAPI.ts similarity index 100% rename from frontend/src/openapi/core/OpenAPI.ts rename to frontend-old/src/openapi/core/OpenAPI.ts diff --git a/frontend/src/openapi/core/request.ts b/frontend-old/src/openapi/core/request.ts similarity index 100% rename from frontend/src/openapi/core/request.ts rename to frontend-old/src/openapi/core/request.ts diff --git a/frontend/src/openapi/index.ts b/frontend-old/src/openapi/index.ts similarity index 100% rename from frontend/src/openapi/index.ts rename to frontend-old/src/openapi/index.ts diff --git a/frontend/src/openapi/models/EditBody.ts b/frontend-old/src/openapi/models/EditBody.ts similarity index 100% rename from frontend/src/openapi/models/EditBody.ts rename to frontend-old/src/openapi/models/EditBody.ts diff --git a/frontend/src/openapi/models/HTTPValidationError.ts b/frontend-old/src/openapi/models/HTTPValidationError.ts similarity index 100% rename from frontend/src/openapi/models/HTTPValidationError.ts rename to frontend-old/src/openapi/models/HTTPValidationError.ts diff --git a/frontend/src/openapi/models/LoginBody.ts b/frontend-old/src/openapi/models/LoginBody.ts similarity index 100% rename from frontend/src/openapi/models/LoginBody.ts rename to frontend-old/src/openapi/models/LoginBody.ts diff --git a/frontend/src/openapi/models/LoginResponse.ts b/frontend-old/src/openapi/models/LoginResponse.ts similarity index 100% rename from frontend/src/openapi/models/LoginResponse.ts rename to frontend-old/src/openapi/models/LoginResponse.ts diff --git a/frontend/src/openapi/models/ProteinEntry.ts b/frontend-old/src/openapi/models/ProteinEntry.ts similarity index 100% rename from frontend/src/openapi/models/ProteinEntry.ts rename to frontend-old/src/openapi/models/ProteinEntry.ts diff --git a/frontend/src/openapi/models/RangeFilter.ts b/frontend-old/src/openapi/models/RangeFilter.ts similarity index 100% rename from frontend/src/openapi/models/RangeFilter.ts rename to frontend-old/src/openapi/models/RangeFilter.ts diff --git a/frontend/src/openapi/models/SearchProteinsBody.ts b/frontend-old/src/openapi/models/SearchProteinsBody.ts similarity index 100% rename from frontend/src/openapi/models/SearchProteinsBody.ts rename to frontend-old/src/openapi/models/SearchProteinsBody.ts diff --git a/frontend/src/openapi/models/SearchProteinsResults.ts b/frontend-old/src/openapi/models/SearchProteinsResults.ts similarity index 100% rename from frontend/src/openapi/models/SearchProteinsResults.ts rename to frontend-old/src/openapi/models/SearchProteinsResults.ts diff --git a/frontend/src/openapi/models/UploadBody.ts b/frontend-old/src/openapi/models/UploadBody.ts similarity index 100% rename from frontend/src/openapi/models/UploadBody.ts rename to frontend-old/src/openapi/models/UploadBody.ts diff --git a/frontend/src/openapi/models/UploadError.ts b/frontend-old/src/openapi/models/UploadError.ts similarity index 100% rename from frontend/src/openapi/models/UploadError.ts rename to frontend-old/src/openapi/models/UploadError.ts diff --git a/frontend/src/openapi/models/ValidationError.ts b/frontend-old/src/openapi/models/ValidationError.ts similarity index 100% rename from frontend/src/openapi/models/ValidationError.ts rename to frontend-old/src/openapi/models/ValidationError.ts diff --git a/frontend/src/openapi/services/DefaultService.ts b/frontend-old/src/openapi/services/DefaultService.ts similarity index 100% rename from frontend/src/openapi/services/DefaultService.ts rename to frontend-old/src/openapi/services/DefaultService.ts diff --git a/frontend/src/routes/+layout.svelte b/frontend-old/src/routes/+layout.svelte similarity index 100% rename from frontend/src/routes/+layout.svelte rename to frontend-old/src/routes/+layout.svelte diff --git a/frontend/src/routes/+page.svelte b/frontend-old/src/routes/+page.svelte similarity index 100% rename from frontend/src/routes/+page.svelte rename to frontend-old/src/routes/+page.svelte diff --git a/frontend/src/routes/+page.ts b/frontend-old/src/routes/+page.ts similarity index 100% rename from frontend/src/routes/+page.ts rename to frontend-old/src/routes/+page.ts diff --git a/frontend/src/routes/Header.svelte b/frontend-old/src/routes/Header.svelte similarity index 100% rename from frontend/src/routes/Header.svelte rename to frontend-old/src/routes/Header.svelte diff --git a/frontend/src/routes/about/+page.svelte b/frontend-old/src/routes/about/+page.svelte similarity index 100% rename from frontend/src/routes/about/+page.svelte rename to frontend-old/src/routes/about/+page.svelte diff --git a/frontend/src/routes/edit/[proteinName]/+page.svelte b/frontend-old/src/routes/edit/[proteinName]/+page.svelte similarity index 100% rename from frontend/src/routes/edit/[proteinName]/+page.svelte rename to frontend-old/src/routes/edit/[proteinName]/+page.svelte diff --git a/frontend/src/routes/edit/[proteinName]/+page.ts b/frontend-old/src/routes/edit/[proteinName]/+page.ts similarity index 100% rename from frontend/src/routes/edit/[proteinName]/+page.ts rename to frontend-old/src/routes/edit/[proteinName]/+page.ts diff --git a/frontend/src/routes/login/+page.svelte b/frontend-old/src/routes/login/+page.svelte similarity index 100% rename from frontend/src/routes/login/+page.svelte rename to frontend-old/src/routes/login/+page.svelte diff --git a/frontend/src/routes/protein/[proteinName]/+page.svelte b/frontend-old/src/routes/protein/[proteinName]/+page.svelte similarity index 100% rename from frontend/src/routes/protein/[proteinName]/+page.svelte rename to frontend-old/src/routes/protein/[proteinName]/+page.svelte diff --git a/frontend/src/routes/protein/[proteinName]/+page.ts b/frontend-old/src/routes/protein/[proteinName]/+page.ts similarity index 100% rename from frontend/src/routes/protein/[proteinName]/+page.ts rename to frontend-old/src/routes/protein/[proteinName]/+page.ts diff --git a/frontend/src/routes/search/+page.svelte b/frontend-old/src/routes/search/+page.svelte similarity index 100% rename from frontend/src/routes/search/+page.svelte rename to frontend-old/src/routes/search/+page.svelte diff --git a/frontend/src/routes/styles.css b/frontend-old/src/routes/styles.css similarity index 100% rename from frontend/src/routes/styles.css rename to frontend-old/src/routes/styles.css diff --git a/frontend/src/routes/upload/+page.svelte b/frontend-old/src/routes/upload/+page.svelte similarity index 100% rename from frontend/src/routes/upload/+page.svelte rename to frontend-old/src/routes/upload/+page.svelte diff --git a/frontend/src/tests/example.test.ts b/frontend-old/src/tests/example.test.ts similarity index 100% rename from frontend/src/tests/example.test.ts rename to frontend-old/src/tests/example.test.ts diff --git a/frontend/static/favicon.png b/frontend-old/static/favicon.png similarity index 100% rename from frontend/static/favicon.png rename to frontend-old/static/favicon.png diff --git a/frontend/static/robots.txt b/frontend-old/static/robots.txt similarity index 100% rename from frontend/static/robots.txt rename to frontend-old/static/robots.txt diff --git a/frontend-old/svelte.config.js b/frontend-old/svelte.config.js new file mode 100644 index 00000000..945aeef1 --- /dev/null +++ b/frontend-old/svelte.config.js @@ -0,0 +1,18 @@ +import adapter from "@sveltejs/adapter-auto"; +import { vitePreprocess } from "@sveltejs/kit/vite"; + +/** @type {import('@sveltejs/kit').Config} */ +const config = { + // Consult https://kit.svelte.dev/docs/integrations#preprocessors + // for more information about preprocessors + preprocess: [vitePreprocess({})], + + kit: { + // adapter-auto only supports some environments, see https://kit.svelte.dev/docs/adapter-auto for a list. + // If your environment is not supported or you settled on a specific environment, switch out the adapter. + // See https://kit.svelte.dev/docs/adapters for more information about adapters. + adapter: adapter(), + }, +}; + +export default config; diff --git a/frontend-new/tailwind.config.cjs b/frontend-old/tailwind.config.cjs similarity index 100% rename from frontend-new/tailwind.config.cjs rename to frontend-old/tailwind.config.cjs diff --git a/frontend-old/tsconfig.json b/frontend-old/tsconfig.json new file mode 100644 index 00000000..6ae0c8c4 --- /dev/null +++ b/frontend-old/tsconfig.json @@ -0,0 +1,17 @@ +{ + "extends": "./.svelte-kit/tsconfig.json", + "compilerOptions": { + "allowJs": true, + "checkJs": true, + "esModuleInterop": true, + "forceConsistentCasingInFileNames": true, + "resolveJsonModule": true, + "skipLibCheck": true, + "sourceMap": true, + "strict": true + } + // Path aliases are handled by https://kit.svelte.dev/docs/configuration#alias + // + // If you want to overwrite includes/excludes, make sure to copy over the relevant includes/excludes + // from the referenced tsconfig.json - TypeScript does not merge them in +} diff --git a/frontend-old/vite.config.ts b/frontend-old/vite.config.ts new file mode 100644 index 00000000..37b6a84b --- /dev/null +++ b/frontend-old/vite.config.ts @@ -0,0 +1,9 @@ +import { sveltekit } from '@sveltejs/kit/vite'; +import { defineConfig } from 'vitest/config'; + +export default defineConfig({ + plugins: [sveltekit()], + test: { + include: ['src/**/*.{test,spec}.{js,ts}'] + } +}); diff --git a/frontend-new/yarn.lock b/frontend-old/yarn.lock similarity index 50% rename from frontend-new/yarn.lock rename to frontend-old/yarn.lock index fd2fa6a7..e925d6d1 100644 --- a/frontend-new/yarn.lock +++ b/frontend-old/yarn.lock @@ -15,169 +15,174 @@ "@jridgewell/gen-mapping" "^0.3.0" "@jridgewell/trace-mapping" "^0.3.9" -"@babel/runtime@^7.23.7": - version "7.23.9" - resolved "https://registry.yarnpkg.com/@babel/runtime/-/runtime-7.23.9.tgz#47791a15e4603bb5f905bc0753801cf21d6345f7" - integrity sha512-0CX6F+BI2s9dkUqr08KFrAIZgNFj75rdBU/DjCyYLIaV/quFjkk6T+EJ2LkZHyZTbEV4L5p97mNkUsHl2wLFAw== 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dependencies: fill-range "^7.0.1" -browserslist@^4.22.2: - version "4.22.3" - resolved "https://registry.yarnpkg.com/browserslist/-/browserslist-4.22.3.tgz#299d11b7e947a6b843981392721169e27d60c5a6" - integrity sha512-UAp55yfwNv0klWNapjs/ktHoguxuQNGnOzxYmfnXIS+8AsRDZkSDxg7R1AX3GKzn078SBI5dzwzj/Yx0Or0e3A== +browserslist@^4.21.10: + version "4.22.1" + resolved "https://registry.yarnpkg.com/browserslist/-/browserslist-4.22.1.tgz#ba91958d1a59b87dab6fed8dfbcb3da5e2e9c619" + integrity sha512-FEVc202+2iuClEhZhrWy6ZiAcRLvNMyYcxZ8raemul1DYVOVdFsbqckWLdsixQZCpJlwe77Z3UTalE7jsjnKfQ== dependencies: - caniuse-lite "^1.0.30001580" - electron-to-chromium "^1.4.648" - node-releases "^2.0.14" + caniuse-lite "^1.0.30001541" + electron-to-chromium "^1.4.535" + node-releases "^2.0.13" update-browserslist-db "^1.0.13" buffer-crc32@^0.2.5: @@ -478,6 +527,16 @@ buffer-crc32@^0.2.5: resolved "https://registry.yarnpkg.com/buffer-crc32/-/buffer-crc32-0.2.13.tgz#0d333e3f00eac50aa1454abd30ef8c2a5d9a7242" integrity 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+chai@^4.3.10: + version "4.3.10" + resolved "https://registry.yarnpkg.com/chai/-/chai-4.3.10.tgz#d784cec635e3b7e2ffb66446a63b4e33bd390384" + integrity sha512-0UXG04VuVbruMUYbJ6JctvH0YnC/4q3/AkT18q4NaITo91CUm0liMS9VqzT9vZhVQ/1eqPanMWjBM+Juhfb/9g== + dependencies: + assertion-error "^1.1.0" + check-error "^1.0.3" + deep-eql "^4.1.3" + get-func-name "^2.0.2" + loupe "^2.3.6" + pathval "^1.1.1" + type-detect "^4.0.8" + +check-error@^1.0.3: + version "1.0.3" + resolved "https://registry.yarnpkg.com/check-error/-/check-error-1.0.3.tgz#a6502e4312a7ee969f646e83bb3ddd56281bd694" + integrity sha512-iKEoDYaRmd1mxM90a2OEfWhjsjPpYPuQ+lMYsoxB126+t8fw7ySEO48nmDg5COTjxDI65/Y2OWpeEHk3ZOe8zg== + dependencies: + get-func-name "^2.0.2" chokidar@^3.4.1, chokidar@^3.5.3: - version "3.6.0" - resolved "https://registry.yarnpkg.com/chokidar/-/chokidar-3.6.0.tgz#197c6cc669ef2a8dc5e7b4d97ee4e092c3eb0d5b" - integrity sha512-7VT13fmjotKpGipCW9JEQAusEPE+Ei8nl6/g4FBAmIm0GOOLMua9NDDo/DWp0ZAxCr3cPq5ZpBqmPAQgDda2Pw== + version "3.5.3" + resolved "https://registry.yarnpkg.com/chokidar/-/chokidar-3.5.3.tgz#1cf37c8707b932bd1af1ae22c0432e2acd1903bd" + integrity sha512-Dr3sfKRP6oTcjf2JmUmFJfeVMvXBdegxB0iVQ5eb2V10uFJUCAS8OByZdVAyVb8xXNz3GjjTgj9kLWsZTqE6kw== dependencies: anymatch "~3.1.2" braces "~3.0.2" @@ -519,17 +603,10 @@ code-red@^1.0.3: estree-walker "^3.0.3" periscopic "^3.1.0" -color-convert@^2.0.1: - version "2.0.1" - resolved "https://registry.yarnpkg.com/color-convert/-/color-convert-2.0.1.tgz#72d3a68d598c9bdb3af2ad1e84f21d896abd4de3" - integrity sha512-RRECPsj7iu/xb5oKYcsFHSppFNnsj/52OVTRKb4zP5onXwVF3zVmmToNcOfGC+CRDpfK/U584fMg38ZHCaElKQ== - dependencies: - color-name "~1.1.4" - -color-name@~1.1.4: - version "1.1.4" - resolved "https://registry.yarnpkg.com/color-name/-/color-name-1.1.4.tgz#c2a09a87acbde69543de6f63fa3995c826c536a2" - integrity sha512-dOy+3AuW3a2wNbZHIuMZpTcgjGuLU/uBL/ubcZF9OXbDo8ff4O8yVp5Bf0efS8uEoYo5q4Fx7dY9OgQGXgAsQA== +commander@^11.0.0: + version "11.1.0" + resolved 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resolved "https://registry.yarnpkg.com/hasown/-/hasown-2.0.0.tgz#f4c513d454a57b7c7e1650778de226b11700546c" @@ -794,6 +913,11 @@ import-fresh@^3.2.1: parent-module "^1.0.0" resolve-from "^4.0.0" +import-meta-resolve@^3.0.0: + version "3.0.0" + resolved "https://registry.yarnpkg.com/import-meta-resolve/-/import-meta-resolve-3.0.0.tgz#94a6aabc623874fbc2f3525ec1300db71c6cbc11" + integrity sha512-4IwhLhNNA8yy445rPjD/lWh++7hMDOml2eHtd58eG7h+qK3EryMuuRbsHGPikCoAgIkkDnckKfWSk2iDla/ejg== + inflight@^1.0.4: version "1.0.6" resolved "https://registry.yarnpkg.com/inflight/-/inflight-1.0.6.tgz#49bd6331d7d02d0c09bc910a1075ba8165b56df9" @@ -826,11 +950,6 @@ is-extglob@^2.1.1: resolved "https://registry.yarnpkg.com/is-extglob/-/is-extglob-2.1.1.tgz#a88c02535791f02ed37c76a1b9ea9773c833f8c2" integrity sha512-SbKbANkN603Vi4jEZv49LeVJMn4yGwsbzZworEoyEiutsN3nJYdbO36zfhGJ6QEDpOZIFkDtnq5JRxmvl3jsoQ== -is-fullwidth-code-point@^3.0.0: - version "3.0.0" - resolved 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any-promise "^1.0.0" +tiny-glob@^0.2.9: + version "0.2.9" + resolved "https://registry.yarnpkg.com/tiny-glob/-/tiny-glob-0.2.9.tgz#2212d441ac17928033b110f8b3640683129d31e2" + integrity sha512-g/55ssRPUjShh+xkfx9UPDXqhckHEsHr4Vd9zX55oSdGZc/MD0m3sferOkwWtp98bv+kcVfEHtRJgBVJzelrzg== + dependencies: + globalyzer "0.1.0" + globrex "^0.1.2" + +tinybench@^2.5.0: + version "2.5.1" + resolved "https://registry.yarnpkg.com/tinybench/-/tinybench-2.5.1.tgz#3408f6552125e53a5a48adee31261686fd71587e" + integrity sha512-65NKvSuAVDP/n4CqH+a9w2kTlLReS9vhsAP06MWx+/89nMinJyB2icyl58RIcqCmIggpojIGeuJGhjU1aGMBSg== + +tinypool@^0.7.0: + version "0.7.0" + resolved "https://registry.yarnpkg.com/tinypool/-/tinypool-0.7.0.tgz#88053cc99b4a594382af23190c609d93fddf8021" + integrity sha512-zSYNUlYSMhJ6Zdou4cJwo/p7w5nmAH17GRfU/ui3ctvjXFErXXkruT4MWW6poDeXgCaIBlGLrfU6TbTXxyGMww== + +tinyspy@^2.1.1: + version "2.2.0" + resolved 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"https://registry.yarnpkg.com/yaml/-/yaml-2.3.4.tgz#53fc1d514be80aabf386dc6001eb29bf3b7523b2" integrity sha512-8aAvwVUSHpfEqTQ4w/KMlf3HcRdt50E5ODIQJBw1fQ5RL34xabzxtUlzTXVqc4rkZsPbvrXKWnABCD7kWSmocA== + +yocto-queue@^1.0.0: + version "1.0.0" + resolved "https://registry.yarnpkg.com/yocto-queue/-/yocto-queue-1.0.0.tgz#7f816433fb2cbc511ec8bf7d263c3b58a1a3c251" + integrity sha512-9bnSc/HEW2uRy67wc+T8UwauLuPJVn28jb+GtJY16iiKWyvmYJRXVT4UamsAEGQfPohgr2q4Tq0sQbQlxTfi1g== diff --git a/frontend/.gitignore b/frontend/.gitignore index 8f6c617e..a547bf36 100644 --- a/frontend/.gitignore +++ b/frontend/.gitignore @@ -1,12 +1,24 @@ -.DS_Store +# Logs +logs +*.log +npm-debug.log* +yarn-debug.log* +yarn-error.log* +pnpm-debug.log* +lerna-debug.log* + node_modules -/build -/.svelte-kit -/package -.env -.env.* -!.env.example -.vercel -.output -vite.config.js.timestamp-* -vite.config.ts.timestamp-* +dist +dist-ssr +*.local + +# Editor directories and files +.vscode/* +!.vscode/extensions.json +.idea +.DS_Store +*.suo +*.ntvs* +*.njsproj +*.sln +*.sw? diff --git a/frontend-new/.vscode/extensions.json b/frontend/.vscode/extensions.json similarity index 100% rename from frontend-new/.vscode/extensions.json rename to frontend/.vscode/extensions.json diff --git a/frontend-new/README.md b/frontend/README.md similarity index 100% rename from frontend-new/README.md rename to frontend/README.md diff --git a/frontend-new/index.html b/frontend/index.html similarity index 100% rename from frontend-new/index.html rename to frontend/index.html diff --git a/frontend/package.json b/frontend/package.json index bc38ade8..76242f1f 100644 --- a/frontend/package.json +++ b/frontend/package.json @@ -1,46 +1,33 @@ { - "name": "venome", - "version": "0.0.1", - "scripts": { - "dev": "vite dev", - "build": "vite build", - "preview": "vite preview", - "check": "svelte-kit sync && svelte-check --tsconfig ./tsconfig.json", - "check:watch": "svelte-kit sync && svelte-check --tsconfig ./tsconfig.json --watch", - "test": "vitest run", - "lint": "prettier --plugin-search-dir . --check .", - "format": "prettier --plugin-search-dir . --write .", - "openapi": "npx openapi-typescript-codegen --input http://localhost:8000/openapi.json --output ./src/openapi --client fetch" - }, - "devDependencies": { - "@fontsource-variable/inter": "^5.0.16", - "@fontsource/fira-mono": "^4.5.10", - "@neoconfetti/svelte": "^1.0.0", - "@sveltejs/adapter-auto": "^2.0.0", - "@sveltejs/kit": "^1.20.4", - "@types/cookie": "^0.5.1", - "@types/js-cookie": "^3.0.6", - "autoprefixer": "^10.4.14", - "flowbite": "^2.1.1", - "flowbite-svelte": "^0.44.19", - "flowbite-svelte-icons": "^0.4.5", - "openapi-typescript-codegen": "^0.25.0", - "postcss": "^8.4.24", - "postcss-load-config": "^4.0.1", - "prettier": "^2.8.0", - "prettier-plugin-svelte": "^2.10.1", - "svelte": "^4.0.5", - "svelte-check": "^3.4.3", - "tailwindcss": "^3.3.2", - "tslib": "^2.4.1", - "typescript": "^5.0.0", - "vite": "^4.4.2", - "vitest": "^0.34.0" - }, - "type": "module", - "dependencies": { - "bibtex": "^0.9.0", - "js-cookie": "^3.0.5", - "marked": "^10.0.0" - } + "name": "frontend-new", + "private": true, + "version": "0.0.0", + "type": "module", + "scripts": { + "dev": "vite", + "build": "vite build", + "preview": "vite preview", + "check": "svelte-check --tsconfig ./tsconfig.json" + }, + "devDependencies": { + "@fontsource-variable/inter": "^5.0.16", + "@fontsource/fira-mono": "^5.0.8", + "@sveltejs/vite-plugin-svelte": "^3.0.1", + "@tsconfig/svelte": "^5.0.2", + "autoprefixer": "^10.4.16", + "flowbite": "^2.2.1", + "flowbite-svelte": "^0.44.22", + "flowbite-svelte-icons": "^1.3.1", + "postcss": "^8.4.32", + "postcss-load-config": "^5.0.2", + "svelte": "^4.2.8", + "svelte-check": "^3.6.2", + "tailwindcss": "^3.3.6", + "tslib": "^2.6.2", + "typescript": "^5.2.2", + "vite": "^5.0.8" + }, + "dependencies": { + "svelte-routing": "^2.11.0" + } } diff --git a/frontend/postcss.config.cjs b/frontend/postcss.config.cjs index e68d4de2..e48cff58 100644 --- a/frontend/postcss.config.cjs +++ b/frontend/postcss.config.cjs @@ -2,12 +2,12 @@ const tailwindcss = require("tailwindcss"); const autoprefixer = require("autoprefixer"); const config = { - plugins: [ - //Some plugins, like tailwindcss/nesting, need to run before Tailwind, - tailwindcss(), - //But others, like autoprefixer, need to run after, - autoprefixer, - ], + plugins: [ + //Some plugins, like tailwindcss/nesting, need to run before Tailwind, + tailwindcss(), + //But others, like autoprefixer, need to run after, + autoprefixer, + ], }; module.exports = config; diff --git a/frontend-new/public/vite.svg b/frontend/public/vite.svg similarity index 100% rename from frontend-new/public/vite.svg rename to frontend/public/vite.svg diff --git a/frontend/src/App.svelte b/frontend/src/App.svelte new file mode 100644 index 00000000..4d648959 --- /dev/null +++ b/frontend/src/App.svelte @@ -0,0 +1,5 @@ + + + diff --git a/frontend-new/src/App.svelte b/frontend/src/Router.svelte similarity index 100% rename from frontend-new/src/App.svelte rename to frontend/src/Router.svelte diff --git a/frontend-new/src/app.pcss b/frontend/src/app.pcss similarity index 100% rename from frontend-new/src/app.pcss rename to frontend/src/app.pcss diff --git a/frontend/src/lib/images/dummy.png b/frontend/src/images/dummy.png similarity index 100% rename from frontend/src/lib/images/dummy.png rename to frontend/src/images/dummy.png diff --git a/frontend/src/lib/images/github.svg b/frontend/src/images/github.svg similarity index 100% rename from frontend/src/lib/images/github.svg rename to frontend/src/images/github.svg diff --git a/frontend/src/lib/images/logo.svg b/frontend/src/images/logo.svg similarity index 100% rename from frontend/src/lib/images/logo.svg rename to frontend/src/images/logo.svg diff --git a/frontend/src/lib/Counter.svelte b/frontend/src/lib/Counter.svelte index 37810d02..979b4dfc 100644 --- a/frontend/src/lib/Counter.svelte +++ b/frontend/src/lib/Counter.svelte @@ -1,25 +1,10 @@ - -
- Count is {count} -
- - - - - + diff --git a/frontend-new/src/lib/Header.svelte b/frontend/src/lib/Header.svelte similarity index 100% rename from frontend-new/src/lib/Header.svelte rename to frontend/src/lib/Header.svelte diff --git a/frontend-new/src/main.ts b/frontend/src/main.ts similarity index 100% rename from frontend-new/src/main.ts rename to frontend/src/main.ts diff --git a/frontend-new/src/routes/Error.svelte b/frontend/src/routes/Error.svelte similarity index 100% rename from frontend-new/src/routes/Error.svelte rename to frontend/src/routes/Error.svelte diff --git a/frontend-new/src/routes/Home.svelte b/frontend/src/routes/Home.svelte similarity index 100% rename from frontend-new/src/routes/Home.svelte rename to frontend/src/routes/Home.svelte diff --git a/frontend-new/src/routes/Login.svelte b/frontend/src/routes/Login.svelte similarity index 100% rename from frontend-new/src/routes/Login.svelte rename to frontend/src/routes/Login.svelte diff --git a/frontend-new/src/routes/Protein.svelte b/frontend/src/routes/Protein.svelte similarity index 100% rename from frontend-new/src/routes/Protein.svelte rename to frontend/src/routes/Protein.svelte diff --git a/frontend-new/src/routes/Search.svelte b/frontend/src/routes/Search.svelte similarity index 100% rename from frontend-new/src/routes/Search.svelte rename to frontend/src/routes/Search.svelte diff --git a/frontend/src/routes/Upload.svelte b/frontend/src/routes/Upload.svelte new file mode 100644 index 00000000..1e3aa42a --- /dev/null +++ b/frontend/src/routes/Upload.svelte @@ -0,0 +1,9 @@ + + +
upload
+ + diff --git a/frontend-new/src/vite-env.d.ts b/frontend/src/vite-env.d.ts similarity index 100% rename from frontend-new/src/vite-env.d.ts rename to frontend/src/vite-env.d.ts diff --git a/frontend/svelte.config.js b/frontend/svelte.config.js index 945aeef1..66b603fe 100644 --- a/frontend/svelte.config.js +++ b/frontend/svelte.config.js @@ -1,18 +1,7 @@ -import adapter from "@sveltejs/adapter-auto"; -import { vitePreprocess } from "@sveltejs/kit/vite"; +import { vitePreprocess } from "@sveltejs/vite-plugin-svelte"; -/** @type {import('@sveltejs/kit').Config} */ -const config = { - // Consult https://kit.svelte.dev/docs/integrations#preprocessors - // for more information about preprocessors - preprocess: [vitePreprocess({})], - - kit: { - // adapter-auto only supports some environments, see https://kit.svelte.dev/docs/adapter-auto for a list. - // If your environment is not supported or you settled on a specific environment, switch out the adapter. - // See https://kit.svelte.dev/docs/adapters for more information about adapters. - adapter: adapter(), - }, +export default { + // Consult https://svelte.dev/docs#compile-time-svelte-preprocess + // for more information about preprocessors + preprocess: [vitePreprocess({})], }; - -export default config; diff --git a/frontend/tsconfig.json b/frontend/tsconfig.json index 6ae0c8c4..5fb548f2 100644 --- a/frontend/tsconfig.json +++ b/frontend/tsconfig.json @@ -1,17 +1,20 @@ { - "extends": "./.svelte-kit/tsconfig.json", - "compilerOptions": { - "allowJs": true, - "checkJs": true, - "esModuleInterop": true, - "forceConsistentCasingInFileNames": true, - "resolveJsonModule": true, - "skipLibCheck": true, - "sourceMap": true, - "strict": true - } - // Path aliases are handled by https://kit.svelte.dev/docs/configuration#alias - // - // If you want to overwrite includes/excludes, make sure to copy over the relevant includes/excludes - // from the referenced tsconfig.json - TypeScript does not merge them in + "extends": "@tsconfig/svelte/tsconfig.json", + "compilerOptions": { + "target": "ESNext", + "useDefineForClassFields": true, + "module": "ESNext", + "resolveJsonModule": true, + /** + * Typecheck JS in `.svelte` and `.js` files by default. + * Disable checkJs if you'd like to use dynamic types in JS. + * Note that setting allowJs false does not prevent the use + * of JS in `.svelte` files. + */ + "allowJs": true, + "checkJs": true, + "isolatedModules": true + }, + "include": ["src/**/*.ts", "src/**/*.js", "src/**/*.svelte"], + "references": [{ "path": "./tsconfig.node.json" }] } diff --git a/frontend-new/tsconfig.node.json b/frontend/tsconfig.node.json similarity index 100% rename from frontend-new/tsconfig.node.json rename to frontend/tsconfig.node.json diff --git a/frontend/vite.config.ts b/frontend/vite.config.ts index 37b6a84b..d7019694 100644 --- a/frontend/vite.config.ts +++ b/frontend/vite.config.ts @@ -1,9 +1,7 @@ -import { sveltekit } from '@sveltejs/kit/vite'; -import { defineConfig } from 'vitest/config'; +import { defineConfig } from 'vite' +import { svelte } from '@sveltejs/vite-plugin-svelte' +// https://vitejs.dev/config/ export default defineConfig({ - plugins: [sveltekit()], - test: { - include: ['src/**/*.{test,spec}.{js,ts}'] - } -}); + plugins: [svelte()], +}) diff --git a/frontend/yarn.lock b/frontend/yarn.lock index e925d6d1..fd2fa6a7 100644 --- a/frontend/yarn.lock +++ b/frontend/yarn.lock @@ -15,174 +15,169 @@ "@jridgewell/gen-mapping" "^0.3.0" "@jridgewell/trace-mapping" "^0.3.9" -"@apidevtools/json-schema-ref-parser@9.0.9": - version "9.0.9" - resolved "https://registry.yarnpkg.com/@apidevtools/json-schema-ref-parser/-/json-schema-ref-parser-9.0.9.tgz#d720f9256e3609621280584f2b47ae165359268b" - integrity sha512-GBD2Le9w2+lVFoc4vswGI/TjkNIZSVp7+9xPf+X3uidBfWnAeUWmquteSyt0+VCrhNMWj/FTABISQrD3Z/YA+w== - dependencies: - "@jsdevtools/ono" "^7.1.3" - "@types/json-schema" "^7.0.6" - call-me-maybe "^1.0.1" - js-yaml "^4.1.0" - 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dependencies: wrappy "1" -openapi-typescript-codegen@^0.25.0: - version "0.25.0" - resolved "https://registry.yarnpkg.com/openapi-typescript-codegen/-/openapi-typescript-codegen-0.25.0.tgz#0cb028f54b33b0a63bd9da3756c1c41b4e1a70e2" - integrity sha512-nN/TnIcGbP58qYgwEEy5FrAAjePcYgfMaCe3tsmYyTgI3v4RR9v8os14L+LEWDvV50+CmqiyTzRkKKtJeb6Ybg== - dependencies: - camelcase "^6.3.0" - commander "^11.0.0" - fs-extra "^11.1.1" - handlebars "^4.7.7" - json-schema-ref-parser "^9.0.9" - -p-limit@^4.0.0: - version "4.0.0" - resolved "https://registry.yarnpkg.com/p-limit/-/p-limit-4.0.0.tgz#914af6544ed32bfa54670b061cafcbd04984b644" - integrity sha512-5b0R4txpzjPWVw/cXXUResoD4hb6U/x9BH08L7nw+GN1sezDzPdxeRvpc9c433fZhBan/wusjbCsqwqm4EIBIQ== - dependencies: - yocto-queue "^1.0.0" - parent-module@^1.0.0: version "1.0.1" resolved "https://registry.yarnpkg.com/parent-module/-/parent-module-1.0.1.tgz#691d2709e78c79fae3a156622452d00762caaaa2" @@ -1211,20 +1033,23 @@ path-is-absolute@^1.0.0: resolved 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- -pathval@^1.1.1: - version "1.1.1" - resolved "https://registry.yarnpkg.com/pathval/-/pathval-1.1.1.tgz#8534e77a77ce7ac5a2512ea21e0fdb8fcf6c3d8d" - integrity sha512-Dp6zGqpTdETdR63lehJYPeIOqpiNBNtc7BpWSLrOje7UaIsE5aY92r/AunQA7rsXvet3lrJ3JnZX29UPTKXyKQ== +path-scurry@^1.10.1: + version "1.10.1" + resolved "https://registry.yarnpkg.com/path-scurry/-/path-scurry-1.10.1.tgz#9ba6bf5aa8500fe9fd67df4f0d9483b2b0bfc698" + integrity sha512-MkhCqzzBEpPvxxQ71Md0b1Kk51W01lrYvlMzSUaIzNsODdd7mqhiimSZlr+VegAz5Z6Vzt9Xg2ttE//XBhH3EQ== + dependencies: + lru-cache "^9.1.1 || ^10.0.0" + minipass "^5.0.0 || ^6.0.2 || ^7.0.0" periscopic@^3.1.0: version "3.1.0" @@ -1255,15 +1080,6 @@ pirates@^4.0.1: resolved "https://registry.yarnpkg.com/pirates/-/pirates-4.0.6.tgz#3018ae32ecfcff6c29ba2267cbf21166ac1f36b9" integrity sha512-saLsH7WeYYPiD25LDuLRRY/i+6HaPYr6G1OUlN39otzkSTxKnubR9RTxS3/Kk50s1g2JTgFwWQDQyplC5/SHZg== -pkg-types@^1.0.3: - version "1.0.3" - resolved 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sha512-bSVhyJGL00wMVoPUzAVAnbEoWyqRxkjv64tUl427SKnPrENtq6hJwUojroMz2VB+Q1edmi4IfrAPpami5VVgMQ== dependencies: - lilconfig "^2.0.5" - yaml "^2.1.1" + lilconfig "^3.0.0" + yaml "^2.3.4" + +postcss-load-config@^5.0.2: + version "5.0.2" + resolved "https://registry.yarnpkg.com/postcss-load-config/-/postcss-load-config-5.0.2.tgz#3d4261d616428e3d6e41c8236c3e456c0f49266f" + integrity sha512-Q8QR3FYbqOKa0bnC1UQ2bFq9/ulHX5Bi34muzitMr8aDtUelO5xKeJEYC/5smE0jNE9zdB/NBnOwXKexELbRlw== + dependencies: + lilconfig "^3.0.0" + yaml "^2.3.4" postcss-nested@^6.0.1: version "6.0.1" @@ -1296,9 +1120,9 @@ postcss-nested@^6.0.1: postcss-selector-parser "^6.0.11" postcss-selector-parser@^6.0.11: - version "6.0.13" - resolved "https://registry.yarnpkg.com/postcss-selector-parser/-/postcss-selector-parser-6.0.13.tgz#d05d8d76b1e8e173257ef9d60b706a8e5e99bf1b" - integrity sha512-EaV1Gl4mUEV4ddhDnv/xtj7sxwrwxdetHdWUGnT4VJQf+4d05v6lHYZr8N573k5Z0BViss7BDhfWtKS3+sfAqQ== + version "6.0.15" + resolved 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-1361,9 +1161,9 @@ readdirp@~3.6.0: picomatch "^2.2.1" regenerator-runtime@^0.14.0: - version "0.14.0" - resolved "https://registry.yarnpkg.com/regenerator-runtime/-/regenerator-runtime-0.14.0.tgz#5e19d68eb12d486f797e15a3c6a918f7cec5eb45" - integrity sha512-srw17NI0TUWHuGa5CFGGmhfNIeja30WMBfbslPNhf6JrqQlLN5gcrvig1oqPxiVaXb0oW0XRKtH6Nngs5lKCIA== + version "0.14.1" + resolved "https://registry.yarnpkg.com/regenerator-runtime/-/regenerator-runtime-0.14.1.tgz#356ade10263f685dda125100cd862c1db895327f" + integrity sha512-dYnhHh0nJoMfnkZs6GmmhFknAGRrLznOu5nc9ML+EJxGvrx6H7teuevqVqCuPcPK//3eDrrjQhehXVx9cnkGdw== resolve-from@^4.0.0: version "4.0.0" @@ -1391,11 +1191,26 @@ rimraf@^2.5.2: dependencies: glob "^7.1.3" -rollup@^3.27.1: - version "3.29.4" - resolved "https://registry.yarnpkg.com/rollup/-/rollup-3.29.4.tgz#4d70c0f9834146df8705bfb69a9a19c9e1109981" - integrity sha512-oWzmBZwvYrU0iJHtDmhsm662rC15FRXmcjCk1xD771dFDx5jJ02ufAQQTn0etB2emNk4J9EZg/yWKpsn9BWGRw== +rollup@^4.2.0: + version 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frontend/src/lib/openapi/core/ApiError.ts | 25 ++ .../src/lib/openapi/core/ApiRequestOptions.ts | 17 + frontend/src/lib/openapi/core/ApiResult.ts | 11 + .../src/lib/openapi/core/CancelablePromise.ts | 131 +++++++ frontend/src/lib/openapi/core/OpenAPI.ts | 32 ++ frontend/src/lib/openapi/core/request.ts | 322 ++++++++++++++++++ frontend/src/lib/openapi/index.ts | 22 ++ frontend/src/lib/openapi/models/EditBody.ts | 13 + .../lib/openapi/models/HTTPValidationError.ts | 9 + frontend/src/lib/openapi/models/LoginBody.ts | 9 + .../src/lib/openapi/models/LoginResponse.ts | 9 + .../src/lib/openapi/models/ProteinEntry.ts | 13 + .../src/lib/openapi/models/RangeFilter.ts | 9 + .../lib/openapi/models/SearchProteinsBody.ts | 12 + .../openapi/models/SearchProteinsResults.ts | 10 + frontend/src/lib/openapi/models/UploadBody.ts | 12 + .../src/lib/openapi/models/UploadError.ts | 10 + .../src/lib/openapi/models/ValidationError.ts | 10 + .../lib/openapi/services/DefaultService.ts | 208 +++++++++++ frontend/src/routes/Upload.svelte | 108 +++++- frontend/yarn.lock | 145 +++++++- 36 files changed, 1670 insertions(+), 48 deletions(-) create mode 100644 frontend/.dockerignore create mode 100644 frontend/Dockerfile create mode 100644 frontend/src/lib/ArticleEditor.svelte delete mode 100644 frontend/src/lib/Counter.svelte create mode 100644 frontend/src/lib/DelayedSpinner.svelte create mode 100644 frontend/src/lib/EntryCard.svelte create mode 100644 frontend/src/lib/ListProteins.svelte create mode 100644 frontend/src/lib/Markdown.svelte create mode 100644 frontend/src/lib/ProteinVis.svelte create mode 100644 frontend/src/lib/RangerFilter.svelte create mode 100644 frontend/src/lib/References.svelte create mode 100644 frontend/src/lib/SimilarProteins.svelte create mode 100644 frontend/src/lib/backend.ts create mode 100644 frontend/src/lib/format.ts create mode 100644 frontend/src/lib/openapi/core/ApiError.ts create mode 100644 frontend/src/lib/openapi/core/ApiRequestOptions.ts create mode 100644 frontend/src/lib/openapi/core/ApiResult.ts create mode 100644 frontend/src/lib/openapi/core/CancelablePromise.ts create mode 100644 frontend/src/lib/openapi/core/OpenAPI.ts create mode 100644 frontend/src/lib/openapi/core/request.ts create mode 100644 frontend/src/lib/openapi/index.ts create mode 100644 frontend/src/lib/openapi/models/EditBody.ts create mode 100644 frontend/src/lib/openapi/models/HTTPValidationError.ts create mode 100644 frontend/src/lib/openapi/models/LoginBody.ts create mode 100644 frontend/src/lib/openapi/models/LoginResponse.ts create mode 100644 frontend/src/lib/openapi/models/ProteinEntry.ts create mode 100644 frontend/src/lib/openapi/models/RangeFilter.ts create mode 100644 frontend/src/lib/openapi/models/SearchProteinsBody.ts create mode 100644 frontend/src/lib/openapi/models/SearchProteinsResults.ts create mode 100644 frontend/src/lib/openapi/models/UploadBody.ts create mode 100644 frontend/src/lib/openapi/models/UploadError.ts create mode 100644 frontend/src/lib/openapi/models/ValidationError.ts create mode 100644 frontend/src/lib/openapi/services/DefaultService.ts diff --git a/frontend/.dockerignore b/frontend/.dockerignore new file mode 100644 index 00000000..40b878db --- /dev/null +++ b/frontend/.dockerignore @@ -0,0 +1 @@ +node_modules/ \ No newline at end of file diff --git a/frontend/Dockerfile b/frontend/Dockerfile new file mode 100644 index 00000000..1f5ae62c --- /dev/null +++ b/frontend/Dockerfile @@ -0,0 +1,16 @@ +# Load the node image +FROM node:20-bookworm-slim + +# Set the working directory +WORKDIR /app + +COPY package.json yarn.lock . + +# Install the dependencies +RUN yarn install + +# Copy the rest of the files +COPY . . + +# Expose the port +EXPOSE 5173 \ No newline at end of file diff --git a/frontend/package.json b/frontend/package.json index 76242f1f..1af3c6fa 100644 --- a/frontend/package.json +++ b/frontend/package.json @@ -1,33 +1,38 @@ { - "name": "frontend-new", - "private": true, - "version": "0.0.0", - "type": "module", - "scripts": { - "dev": "vite", - "build": "vite build", - "preview": "vite preview", - "check": "svelte-check --tsconfig ./tsconfig.json" - }, - "devDependencies": { - "@fontsource-variable/inter": "^5.0.16", - "@fontsource/fira-mono": "^5.0.8", - "@sveltejs/vite-plugin-svelte": "^3.0.1", - "@tsconfig/svelte": "^5.0.2", - "autoprefixer": "^10.4.16", - "flowbite": "^2.2.1", - "flowbite-svelte": "^0.44.22", - "flowbite-svelte-icons": "^1.3.1", - "postcss": "^8.4.32", - "postcss-load-config": "^5.0.2", - "svelte": "^4.2.8", - "svelte-check": "^3.6.2", - "tailwindcss": "^3.3.6", - "tslib": "^2.6.2", - "typescript": "^5.2.2", - "vite": "^5.0.8" - }, - "dependencies": { - "svelte-routing": "^2.11.0" - } + "name": "frontend-new", + "private": true, + "version": "0.0.0", + "type": "module", + "scripts": { + "dev": "vite", + "build": "vite build", + "preview": "vite preview", + "check": "svelte-check --tsconfig ./tsconfig.json", + "openapi": "npx openapi-typescript-codegen --input http://localhost:8000/openapi.json --output ./src/lib/openapi --client fetch" + }, + "devDependencies": { + "@fontsource-variable/inter": "^5.0.16", + "@fontsource/fira-mono": "^5.0.8", + "@sveltejs/vite-plugin-svelte": "^3.0.1", + "@tsconfig/svelte": "^5.0.2", + "autoprefixer": "^10.4.16", + "flowbite": "^2.2.1", + "flowbite-svelte": "^0.44.22", + "flowbite-svelte-icons": "^1.3.1", + "openapi-typescript-codegen": "^0.27.0", + "postcss": "^8.4.32", + "postcss-load-config": "^5.0.2", + "svelte": "^4.2.8", + "svelte-check": "^3.6.2", + "tailwindcss": "^3.3.6", + "tslib": "^2.6.2", + "typescript": "^5.2.2", + "vite": "^5.0.8" + }, + "dependencies": { + "bibtex": "^0.9.0", + "js-cookie": "^3.0.5", + "marked": "^12.0.0", + "svelte-routing": "^2.11.0" + } } diff --git a/frontend/src/lib/ArticleEditor.svelte b/frontend/src/lib/ArticleEditor.svelte new file mode 100644 index 00000000..0cc742a8 --- /dev/null +++ b/frontend/src/lib/ArticleEditor.svelte @@ -0,0 +1,60 @@ + + + + + +
+ +