setup.py

import os
from setuptools import setup, find_packages


def get_version():
    with open(
        os.path.join(
            os.path.dirname(os.path.realpath(__file__)),
            "reneo",
            "reneo.VERSION",
        )
    ) as f:
        return f.readline().strip()
    

def get_description():
    with open("README.md", "r") as fh:
        long_description = fh.read()
    return long_description


def get_data_files():
    data_files = [(".", ["LICENSE", "README.md"])]
    return data_files


setup(
    name="reneo",
    packages=find_packages(),
    url="https://github.com/Vini2/reneo",
    python_requires=">=3.9",
    description="Unraveling Viral Genomes from Metagenomes",
    long_description=get_description(),
    long_description_content_type="text/markdown",
    version=get_version(),
    author="Vijini Mallawaarachchi",
    author_email="viji.mallawaarachchi@gmail.com",
    data_files=get_data_files(),
    py_modules=["reneo"],
    install_requires=[
        "snakemake>=7.14.0",
        "pyyaml>=6.0",
        "click>=8.1.3",
        "metasnek>=0.0.5",
        "snaketool-utils>=0.0.4",
    ],
    entry_points={
        "console_scripts": [
            "reneo=reneo.__main__:main"
        ]
    },
    include_package_data=True,
    classifiers=[
        "Development Status :: 4 - Beta",
        "Programming Language :: Python :: 3",
        "License :: OSI Approved :: MIT License",
        "Natural Language :: English",
        "Topic :: Scientific/Engineering :: Bio-Informatics",
        "Operating System :: OS Independent",
    ],
)