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setup.py
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setup.py
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"""
Usage: pip install -e .
python setup.py install
python setup.py bdist_wheel
python setup.py sdist bdist_egg
twine upload dist/*
"""
# NOTE: Requires cx_freeze==6.0.b1 for linux builds
import sys
import versioneer
from codecs import open
from os import path
# These bits don't get collected automatically when packaging:
loosebits = ["numpy.core._methods", "numpy.lib.recfunctions"]
from setuptools import setup, find_packages, find_namespace_packages
# read the contents of your README file
from pathlib import Path
this_directory = Path(__file__).parent
long_description = (this_directory / "README.md").read_text()
setup(
name="xicam",
# Versions should comply with PEP440. For a discussion on single-sourcing
# the version across setup.py and the project code, see
# https://packaging.python.org/en/latest/single_source_version.html
version=versioneer.get_version(),
cmdclass=versioneer.get_cmdclass(),
description="The CAMERA platform for synchrotron data management, visualization, and reduction.",
long_description=long_description,
long_description_content_type="text/markdown",
# The project's main homepage.
url="https://github.com/Xi-cam/Xi-cam",
download_url="https://pypi.org/project/xicam/",
# Author details
author="Ronald J Pandolfi",
author_email="ronpandolfi@lbl.gov",
# Choose your license
license="BSD",
# See https://pypi.python.org/pypi?%3Aaction=list_classifiers
classifiers=[
# How mature is this project? Common values are
# 3 - Alpha
# 4 - Beta
# 5 - Production/Stable
"Development Status :: 3 - Alpha",
# Indicate who your project is intended for
"Intended Audience :: Science/Research",
"Topic :: Scientific/Engineering :: Physics",
# Pick your license as you wish (should match "license" above)
"License :: OSI Approved :: BSD License",
# Specify the Python versions you support here. In particular, ensure
# that you indicate whether you support Python 2, Python 3 or both.
"Programming Language :: Python :: 3.7",
],
# What does your project relate to?
keywords="synchrotron analysis x-ray scattering tomography ",
# You can just specify the packages manually here if your project is
# simple. Or you can use find_packages().
packages=find_packages() + find_namespace_packages(include=["xicam.*"]),
package_dir={},
# Alternatively, if you want to distribute just a my_module.py, uncomment
# this:
py_modules=["xicam._version", "xicam.run_xicam", "xicam.run_headless"],
# List run-time dependencies here. These will be installed by pip when
# your project is installed. For an analysis of "install_requires" vs pip's
# requirements files see:
# https://packaging.python.org/en/latest/requirements.html
install_requires=["PyQt5",
"qtpy<2.4",
"astropy",
"numpy>=1.16.0",
"appdirs",
"qdarkstyle",
"qtmodern",
"databroker<2",
"bluesky-widgets>=0.0.3",
"distributed",
"dask[array,bag]",
"astropy",
"virtualenv",
"requests",
"appdirs",
"entrypoints",
"pyqtgraph<0.14",
"qtconsole",
"scipy",
"matplotlib",
"h5py",
"scikit-image",
"pyflakes<2.5",
"camsaxs", ],
setup_requires=["cython"], # cython is a missing required dep of astropy
# List additional groups of dependencies here (e.g. development
# dependencies). You can install these using the following syntax,
# for example:
# $ pip install -e .[dev,tests]
extras_require={
"docs": ["docutils<=0.16", "sphinx", "recommonmark", "sphinx_bootstrap_theme", "sphinx-markdown-tables"],
"tests": ["pytest", "coverage", "coveralls", "codecov", "pylint", "pytest-qt", "pytest-cov"],
"pyqt5": ["pyqt5"],
"PySide2": ["PySide2"],
},
# If there are data files included in your packages that need to be
# installed, specify them here. If using Python 2.6 or less, then these
# have to be included in MANIFEST.in as well.
package_data={},
# Although 'package_data' is the preferred approach, in some case you may
# need to place data files outside of your packages. See:
# http://docs.python.org/3.4/distutils/setupscript.html#installing-additional-files # noqa
# In this case, 'data_file' will be installed into '<sys.prefix>/my_data'
# data_files=[#('lib/python2.7/site-packages/gui', glob.glob('gui/*')),
# ('lib/python2.7/site-packages/yaml/tomography',glob.glob('yaml/tomography/*'))],
# To provide executable scripts, use entry points in preference to the
# "scripts" keyword. Entry points provide cross-platform support and allow
# pip to create the appropriate form of executable for the target platform.
entry_points={
"gui_scripts": ["xicam=xicam.run_xicam:main"],
"xicam.plugins.DataHandlerPlugin": ["npy = xicam.core.formats.NPYPlugin:NPYPlugin"],
"databroker.ingestors": ["application/x-npy = xicam.core.formats.NPYPlugin:ingest_npy"],
"xicam.plugins.PluginType": [
"CatalogPlugin = xicam.plugins.catalogplugin:CatalogPlugin",
"ControllerPlugin = xicam.plugins.controllerplugin:ControllerPlugin",
"DataHandlerPlugin = xicam.plugins.datahandlerplugin:DataHandlerPlugin",
"DataResourcePlugin = xicam.plugins.dataresourceplugin:DataResourcePlugin",
"EZPlugin = xicam.plugins.ezplugin:_EZPlugin",
"Fittable1DModelPlugin = xicam.plugins.fittablemodelplugin:Fittable1DModelPlugin",
"GUIPlugin = xicam.plugins.guiplugin:GUIPlugin",
'OperationPlugin = xicam.plugins.operationplugin:OperationPlugin',
"SettingsPlugin = xicam.plugins.settingsplugin:SettingsPlugin",
"QWidgetPlugin = xicam.plugins.widgetplugin:QWidgetPlugin",
"IntentCanvasPlugin = xicam.plugins.intentcanvasplugin:IntentCanvasPlugin",
"ingestors = xicam.plugins.ingestorplugin:IngestorPlugin",
"sniffers = xicam.plugins.snifferplugin:SnifferPlugin",
"intents = xicam.plugins.intentplugin:IntentPlugin",
"ImageMixinPlugin = xicam.plugins.imagemixinplugin:ImageMixinPlugin",
"PlotMixinPlugin = xicam.plugins.plotmixinplugin:PlotMixinPlugin",
],
"xicam.plugins.SettingsPlugin": [
"logging = xicam.gui.settings.logging:LoggingSettingsPlugin",
"appearance = xicam.gui.settings.appearance:AppearanceSettingsPlugin",
"execution = xicam.gui.settings.execution:ExecutionSettingsPlugin",
"databroker = xicam.gui.settings.databroker:DatabrokerSettingsPlugin",
"connections = xicam.gui.connections:ConnectionSettingsPlugin",
"cammart = xicam.gui.cammart:CamMartSettingsPlugin",
"venvs = xicam.gui.cammart.venvs:VenvsSettingsPlugin",
],
"xicam.plugins.CatalogPlugin": [
"databroker_catalog_plugin = xicam.gui.bluesky.databroker_catalog_plugin:DatabrokerCatalogPlugin"
],
"xicam.plugins.OperationPlugin": [
"random_array = xicam.core.operations:random_array",
"raccoon_face = xicam.core.operations:raccoon_face",
"fourier_transform = xicam.core.operations:fourier_transform",
"low_band_pass = xicam.core.operations:low_band_pass",
"inverse_fourier_transform = xicam.core.operations:inverse_fourier_transform",
"absolute_square = xicam.core.operations:absolute_square",
"tuple_test = xicam.core.operations:tuple_test",
],
"xicam.plugins.IntentCanvasPlugin": [
"plot_canvas = xicam.gui.canvases:PlotIntentCanvas",
"image_canvas = xicam.gui.canvases:ImageIntentCanvas",
"pairplot_canvas = xicam.gui.canvases:PairPlotIntentCanvas"
],
"databroker.intents": [
"PlotIntent = xicam.core.intents:PlotIntent",
"ImageIntent = xicam.core.intents:ImageIntent",
"ErrorBarIntent = xicam.core.intents:ErrorBarIntent",
"BarIntent = xicam.core.intents:BarIntent",
"PairPlotIntent = xicam.core.intents:PairPlotIntent",
"ScatterIntent = xicam.core.intents:ScatterIntent",
],
'xicam.plugins.ImageMixinPlugin': [
"RowMajor = xicam.gui.widgets.imageviewmixins:RowMajor",
],
'xicam.plugins.PlotMixinPlugin': [
"ToggleSymbols = xicam.gui.widgets.plotwidgetmixins:ToggleSymbols",
],
},
ext_modules=[],
include_package_data=True,
)