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Overall Ranking > Knowledge > R

Updated: 2022-04-10   /   Tips:English projects refer to those with documents in English, usually displayed in the readme / wiki / official website.

# Repository Description Stars Updated
1 swirldev/swirl_courses 🎓 A collection of interactive courses for the swirl R package. 3852 2022-03-31
2 hadley/r4ds R for data science: a book 3405 2022-04-07
3 rmcelreath/stat_rethinking_2022 Statistical Rethinking course winter 2022 2916 2022-03-15
4 briatte/awesome-network-analysis A curated list of awesome network analysis resources. 2617 2022-03-08
5 rmcelreath/rethinking Statistical Rethinking course and book package 1649 2022-04-01
6 Robinlovelace/geocompr Open source book: Geocomputation with R 1085 2022-03-31
7 hadley/mastering-shiny Mastering Shiny: a book 1012 2022-04-01
8 EmilHvitfeldt/r-color-palettes Comprehensive list of color palettes available in R ❤️🧡💛💚💙💜 964 2021-11-22
9 rdpeng/ProgrammingAssignment2 Repository for Programming Assignment 2 for R Programming on Coursera 730 2022-04-03
10 EmilHvitfeldt/paletteer 🎨🎨🎨 Collection of most color palettes in a single R package 654 2021-11-22
11 ModelOriented/DrWhy DrWhy is the collection of tools for eXplainable AI (XAI). It's based on shared principles and simple grammar for exploration, explanation and visualisation of predictive models. 520 2021-12-21
12 TheAlgorithms/R Collection of various algorithms implemented in R. 520 2022-03-27
13 facebookexperimental/Robyn Robyn is an experimental, automated and open-sourced Marketing Mix Modeling (MMM) package from Facebook Marketing Science. It uses various machine learning techniques (Ridge regression with cross vali ... 413 2022-04-01
14 selva86/datasets A collection of datasets of ML problem solving 397 2022-01-08
15 matloff/fasteR Fast Lane to Learning R! 343 2022-03-26
16 yusuzech/r-web-scraping-cheat-sheet Guide, reference and cheatsheet on web scraping using rvest, httr and Rselenium. 291 2022-02-01
17 mdozmorov/scRNA-seq_notes A list of scRNA-seq analysis tools 254 2022-03-28
18 avehtari/ROS-Examples Regression and other stories R examples 253 2022-03-31
19 jsta/r-docker-tutorial A docker tutorial for reproducible research 242 2022-02-02
20 rstudio/Intro Course materials for "Introduction to Data Science with R", a video course by RStudio and O'Reilly Media 233 2022-03-28
21 pzhaonet/bookdownplus The easiest way to use R package bookdown for writing varied types of books and documents 229 2021-12-31
22 rstudio/pins Pin, Discover and Share Resources 227 2022-03-11
23 ben519/DataWrangling The ultimate reference guide to data wrangling with Python and R 227 2022-02-01
24 ecpolley/SuperLearner Current version of the SuperLearner R package 222 2021-11-29
25 schochastics/graphlayouts new layout algorithms for network visualizations in R 219 2022-01-16
26 jackwasey/icd Fast ICD-10 and ICD-9 comorbidities, decoding and validation in R. NB use main instead of master for default branch. 202 2021-11-20
27 alastairrushworth/free-data-science 🛠️ 🌐 Thematic list of high-quality data science resources 191 2021-10-24
28 SNStatComp/awesome-official-statistics-software An awesome list of statistical software for creating and accessing official statistics 189 2022-03-03
29 rmcelreath/causal_salad_2021 One day course on causal inference, MPI-EVA 9 September 2021 187 2022-01-27
30 MathiasHarrer/Doing-Meta-Analysis-in-R All R code and source files for the online guide "Doing Meta-Analysis with R: A Hands-On Guide" 187 2022-03-17
31 r-spatialecology/landscapemetrics Landscape Metrics for Categorical Map Patterns 🗺️ in R 185 2022-02-16
32 xiaolei-lab/rMVP 📮 A Memory-efficient, Visualization-enhanced, and Parallel-accelerated Tool For Genome-Wide Association Study 169 2022-04-01
33 mikelove/bioc-refcard Bioconductor cheat sheet 169 2022-02-17
34 r-lib/ymlthis write YAML for R Markdown, bookdown, blogdown, and more 153 2021-10-10
35 daroczig/fbRads Analyze and manage Facebook ads from R using this client library to access their Marketing APIs 140 2022-01-04
36 paleolimbot/qgisprocess Use 'QGIS' Processing Algorithms 137 2022-03-09
37 rstudio/gradethis Tools for teachers to use with learnr 136 2022-03-29
38 jennybc/repurrrsive Recursive lists to use in teaching and examples, because there is no iris data for lists. 117 2021-10-17
39 mattansb/Structural-Equation-Modeling-foR-Psychologists Lesson files used in the Structural Equation Modeling for Psychologists. 113 2021-10-19
40 ThinkR-open/fakir Create Fake Data in R for tutorials 111 2022-03-18
41 dlab-berkeley/R-Fundamentals D-Lab's 12 hour introduction to R Fundamentals. Learn how to create variables and functions, manipulate data frames, make visualizations, use control flow structures, and more, using R in RStudio. 109 2022-03-31
42 dlab-berkeley/R-Deep-Learning Workshop (6 hours): Deep learning in R using Keras. Building & training deep nets, image classification, transfer learning, text analysis, visualization 105 2021-12-28
43 lassefolkersen/impute-me This is the code behind the www.impute.me site. It contains algorithms for personal genome analysis, including imputation and polygenic risk score calculation 100 2022-01-02
44 HopkinsIDD/COVIDScenarioPipeline Public shared code for doing scenario forecasting and creating reports for various governmental entities. 99 2022-04-02
45 max-alletsee/rstudio-themes A collection of themes for RStudio 98 2022-02-06
46 STATWORX/blog Collection of the codes which are used on our blog at https://www.statworx.com/de/blog/ 98 2022-02-02
47 schochastics/edgebundle R package implementing edge bundling algorithms 94 2022-01-23
48 ThinkR-open/shinysnippets A series of shiny related RStudio Snippets 88 2021-11-26
49 jumpingrivers/meetingsR A list of R conferences and user groups 87 2022-03-30
50 UMCUGenetics/MutationalPatterns R package for extracting and visualizing mutational patterns in base substitution catalogues 85 2022-02-23
51 jthomasmock/gtExtras A Collection of Helper Functions for the gt Package. 79 2022-03-29
52 ikashnitsky/dataviz-art-skill Data visualization course at MPIDR 78 2021-11-03
53 tidymodels/vetiver-r Version, share, deploy, and monitor models 77 2022-03-25
54 robjhyndman/fpp3package All data sets required for the examples and exercises in the book "Forecasting: principles and practice" (3rd ed, 2020) by Rob J Hyndman and George Athanasopoulos http://OTexts.org/fpp3/. All packa ... 77 2022-01-12
55 luca-scr/GA An R package for optimization using genetic algorithms 76 2021-10-14
56 davesteps/machLearn Machine learning dashboard created with R/shiny 73 2021-11-02
57 tidymodels/workflowsets Create a collection of modeling workflows 72 2022-03-15
58 wlandau/targets-tutorial Short course on the targets R package 72 2021-11-04
59 mlr-org/mlr3learners Recommended learners for mlr3 72 2022-04-03
60 OHDSI/TheBookOfOhdsi The Book of OHDSI repository 71 2021-12-30
61 mlr-org/mlr3proba Probabilistic Supervised Learning for mlr3 68 2022-04-03
62 asheshrambachan/HonestDiD Robust inference in difference-in-differences and event study designs 64 2022-03-20
63 jasonge27/picasso Penalized Sparse Learning Solver - Unleash the Power of Nonconvex Penalty 64 2022-01-06
64 mattansb/Analysis-of-Factorial-Designs-foR-Psychologists Lesson files used in the Analysis of Factorial Designs for Psychologists. 62 2022-01-31
65 JimDuggan/SDMR Resources for text book "System Dynamics Modeling with R" 62 2022-02-25
66 GoekeLab/bambu Reference-guided transcript discovery and quantification for long read RNA-Seq data 61 2022-04-01
67 rstudio/shinyapps-package-dependencies Collection of bash scripts that install R package system dependencies 61 2022-03-22
68 ggobi/tourr A implementation of tour algorithms in R 59 2022-03-25
69 facebookresearch/Radlibrary An R package for accessing the Facebook Ad Library API 57 2022-04-03
70 grimbough/msmbstyle Tufte inspired bookdown template 57 2022-03-28
71 andrewcparnell/jags_examples A large set of JAGS examples using R 56 2022-02-15
72 dwoll/RExRepos R Examples Repository 55 2022-03-30
73 rstudio/bookdown.org Source documents to generate the bookdown.org website 54 2022-03-31
74 grf-labs/policytree Policy learning via doubly robust empirical welfare maximization over trees 53 2022-03-20
75 dppalomar/spectralGraphTopology Learning Graphs from Data via Spectral Constraints for k-component, bipartite, and k-component bipartite graphs 53 2022-03-16
76 NickCH-K/Econometrics A Swirl course for introductory econometrics 52 2022-03-31
77 samuel-marsh/scCustomize R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R. 51 2022-03-24
78 nhs-r-community/NHSRdatasets Free NHS and healthcare related datasets for training and learning R 51 2021-11-10
79 rstudio/swagger Swagger is a collection of HTML, Javascript, and CSS assets that dynamically generate beautiful documentation from a Swagger-compliant API. 51 2021-11-19
80 wviechtb/course_oor Repo for the 'Open Online Introduction to R Course' 50 2022-01-03
81 jkrijthe/RSSL A Semi-Supervised Learning package for the R programming language 50 2022-01-17
82 kgoldfeld/simstudy simstudy: Illuminating research methods through data generation 48 2022-03-12
83 yonicd/texPreview Efficiently iterate, refine and share snippets of LaTeX in R with ease 47 2022-03-29
84 tidymodels/learntidymodels Learn tidymodels with interactive learnr primers 46 2021-12-13
85 bayes-rules/bayesrules 📦 R package for Supplemental Materials for the Bayes Rules! Book 46 2022-03-21
86 ropensci/rfigshare Programmatic interface for Figshare 45 2022-03-18
87 ropensci/bowerbird Keep a collection of sparkly data resources 44 2021-11-30
88 jmcastagnetto/ggplot2_themes_in_github A generated list of repos containing themes/styles for ggplot2 43 2022-02-08
89 sol-eng/python-examples Examples of using Python with RStudio Connect 42 2022-03-16
90 Dato-Futbol/xg-model An example of how to create a xG model using R and Wyscout event data 41 2022-03-29
91 psy-farrell/computational-modelling Code and website accompanying Farrell & Lewandowsky's (2017) book 41 2022-02-26
92 mdsteiner/ShinyPsych A collection of psychology experiments programmed in Shiny 41 2022-02-08
93 PLN-team/PLNmodels A collection of Poisson lognormal models for multivariate count data analysis 40 2022-04-02
94 ledell/subsemble subsemble R package for ensemble learning on subsets of data 39 2022-01-21
95 david-barnett/microViz R package for microbiome data visualization. Uses phyloseq, vegan and tidyverse. See website link for docs with visual examples. Docker image available. 37 2021-12-02
96 mlr-org/mlr3extralearners Extra learners for use in mlr3. 37 2022-04-03
97 epiforecasts/covidregionaldata An interface to subnational and national level COVID-19 data. For all countries supported, this includes a daily time-series of cases. Wherever available we also provide data on deaths, hospitalisatio ... 36 2022-03-16
98 saezlab/decoupleR R package to infer biological activities from omics data using a collection of methods. 36 2022-04-01
99 rstudio-education/dsbox Companion R package to Data Science Course in a Box 36 2022-03-25
100 StatsGary/MLDataR A collection of Machine Learning datasets for health care and beyond 35 2022-03-07
101 speciationgenomics/scripts Scripts for analysis used during the course 35 2021-12-15
102 STATWORX/helfRlein This package contains a collection of R helper functions. 35 2022-03-15
103 ncss-tech/aqp Algorithms for Quantitative Pedology 35 2022-03-31
104 BaderLab/scClustViz Explore and share your scRNAseq clustering results 34 2021-11-08
105 tlverse/tmle3 🎯🎓 Generalized Targeted Learning Framework 33 2022-03-04
106 jimbrig/jimsghstars A curated list of my GitHub stars! ⭐ https://jimbrig.github.io/jimsghstars/ 32 2022-04-03
107 stephenslab/fastTopics Fast algorithms for fitting topic models and non-negative matrix factorizations to count data. 31 2022-04-03
108 ThinkR-open/gitdown Document each modification of your software by turning your git commits into a gitbook 30 2022-03-05
109 marchtaylor/sinkr A collection of functions with emphasis on multivariate methods and handling of geographic datasets 30 2022-02-15
110 etiennebacher/awesome-R-JS-adaptation A list of Javascript and CSS libraries that have been adapted in R. 29 2022-03-25
111 DarkEyes/VLTimeSeriesCausality A framework to infer causality on a pair of time series of real numbers based on Variable-lag Granger causality and transfer entropy. 29 2022-01-24
112 matt-dray/dehex 🎨👀 R package: learn to assess a colour hex code by eye 28 2022-02-22
113 robertdj/renv-docker A guide to getting {renv} projects into Docker images 28 2022-03-21
114 mlr-org/mlr3keras Deep learning for mlr3 28 2022-01-20
115 mdsr-book/mdsr Complement to CRC Press book Modern Data Science with R 28 2021-12-15
116 AammarTufail/R_with_Aammar We upload the contents of our Data Science Course in this repository 27 2021-12-15
117 ch-bu/ggplot2-fundamentals A ggplot2 course from Christian Burkhart. Become a ggplot2 expert from scratch and learn to create any visualization in ggplot2. 27 2022-02-19
118 evolgeniusteam/R-for-bioinformatics R course for bioinformatics 27 2021-11-03
119 wpeterman/ResistanceGA Optimize resistance surfaces using Genetic Algorithms 27 2022-01-19
120 lgnbhl/polyglot 🎓Use the R Console as an interactive learning environment 26 2021-10-10
121 jbkunst/highcharter-shiny Some highcharter examples 26 2021-12-15
122 nickbearman/intro-r-spatial-analysis Material for 1 day Introductory Course on Using R (& RStudio) for Spatial Analysis 26 2022-01-28
123 Swarbricklab-code/BrCa_cell_atlas Data processing and analysis related code associated with the study "A single-cell and spatially resolved atlas of human breast cancers". 25 2022-04-03
124 davidski/collector ⚖Open Source Toolkit for Conducting Quantitative Risk Assessment Interviews 25 2022-03-27
125 jackobailey/britpol britpol: Data and Functions for Studying British Politics 24 2021-12-10
126 dxsbiocc/learn my learning journey 24 2021-12-06
127 mirca/fingraph Learning graphs in heavy-tailed markets 24 2022-03-07
128 bcgov/elucidate convenience functions to help researchers elucidate patterns in their data 24 2022-03-03
129 rivolli/utiml Utilities for multi-label learning 24 2022-01-05
130 tjmahr/notestar notestar is a notebook system built on the targets package: notes with targets. 23 2022-03-01
131 speciationgenomics/presentations Presentations from the course 23 2021-12-15
132 selesnow/rfacebookstat Загрузка статистики по рекламных кампаниям из Facebook в R. 23 2021-12-29
133 enricoschumann/NMOF Functions, examples and data from the first and the second edition of "Numerical Methods and Optimization in Finance" by M. Gilli, D. Maringer and E. Schumann (2019, ISBN:978-0128150658). This repos ... 23 2022-03-23
134 SCiO-systems/cgspatial-notebook cgspatial-notebook is a community Jupyter Docker Stack image. The image includes major geospatial Python & R libraries on top of the datascience-notebook image. 22 2021-11-11
135 JanaJarecki/cognitivemodels Cognitivemodels is an open-source R library to create, fit, test, and compare computational cognitive models based on machine-learning principles. 22 2022-02-16
136 davetang/machine_learning Machine learning in R 22 2022-03-26
137 juliasilge/deploytidymodels Version, share, and deploy tidymodels workflows 21 2021-11-16
138 ThinkR-open/testdown Turn your 'testthat' results into a Bookdown. 21 2022-01-08
139 BIMIB-DISCo/TRONCO Repository of the TRanslational ONCOlogy library, which includes various algorithms (such as CAPRESE and CAPRI) and the Pipeline for Cancer Inference (PICNIC). Website: https://sites.google.com/site/t ... 21 2021-10-28
140 EllaKaye/distilltools A collection of tools to support the creation and styling of content on {distill} websites 20 2021-12-16
141 svmiller/steveproj An R package for getting academic projects/papers started. 20 2021-11-18
142 tidyverse/funs Collection of low-level functions for working with vctrs 20 2021-11-12
143 kiat/R-Examples R Code Examples for Data Analytics 20 2021-11-04
144 h4sci/h4sci-course ETH PhD Program course 19 2021-11-18
145 EmilHvitfeldt/bookdown-github-actions-netlify Example of using Github Actions to deploy bookdown on Netlify 19 2021-11-25
146 bldavies/nberwp R package containing data on NBER working papers 19 2022-03-27
147 Evolutionary-Optimization-Laboratory/rmoo An R package for multi/many-objective optimization with non-dominated genetic algorithms' family 18 2021-12-12
148 ListenLab/Praat A collection of Praat scripts and Praat-R tools 18 2022-03-10
149 kW-Labs/nmecr An implementation of peer-reviewed energy data analysis algorithms for site-specific M&V 18 2021-12-04
150 benkeser/survtmle Targeted Learning for Survival Analysis 18 2022-02-15
151 cran/kernlab ❗ This is a read-only mirror of the CRAN R package repository. kernlab — Kernel-Based Machine Learning Lab 18 2022-04-02
152 CDCgov/Rnssp A Signature R package for the National Syndromic Surveillance Program (NSSP) at the Centers for Disease Control and Prevention (CDC). A collection of tools, functions, and R Markdown templates that su ... 17 2022-04-01
153 sysilviakim/swirl-tidy Learn tidyverse in R via a set of swirl (https://swirlstats.com) lessons on introductions to tidyverse. 17 2021-10-31
154 mayer79/flashlight Machine learning explanations 17 2022-02-10
155 PHBS/StoFin PHBS Stochastic Finance Course Website 17 2022-03-10
156 ajwills72/catlearn Formal Psychological Models of Categorization and Learning 17 2022-03-28
157 FredHasselman/casnet An R toolbox for studying Complex Adaptive Systems and NETworks 17 2022-03-08
158 dlab-berkeley/R-Data-Wrangling D-Lab's 6 hour introduction to data wrangling with R. Learn how to manipulate dataframes using the tidyverse in R. 17 2022-03-25
159 Trackage/traipse shared tools for track data 17 2021-10-12
160 hoehleatsu/STA427_SM4IDE Repo for the course Statistical Methods in Infectious Disease Epidemiology at UZH 16 2021-12-22
161 microsoft/AzureML-R-template Patterns and examples for running R code with Azure Machine Learning 16 2022-02-03
162 dkesada/dbnR Gaussian dynamic Bayesian networks structure learning and inference based on the bnlearn package 16 2022-03-22
163 zadrafi/concurve A repository for the 'concurve' R package which generates confidence distributions and likelihood functions. Includes documentation on how to do produce similar graphs for Stata. 16 2021-12-20
164 nacnudus/spreadsheet-munging-strategies A book about munging complex spreadsheets in R with tidyxl and unpivotr 16 2021-11-23
165 tsamsonov/r-geo-course An introductory course on using R for geographic data visualisation and analysis (in Russian). 16 2021-12-21
166 brry/course R programming courses material 16 2022-03-24
167 bmihaljevic/bnclassify Learning Discrete Bayesian Network Classifiers from Data 16 2021-11-18
168 ddsjoberg/bstfun Miscellaneous collection of functions 15 2022-04-03
169 zoltanctoth/ceu-cloud-class This is the repo for the Data Engineering 3 - Cloud and Big Data Computing course delivered at the Central European University ceu.edu 15 2021-12-01
170 statisticspoland/R_Package_to_API_BDL The 'bdl' package, prepared by Statistics Poland, is an interface to Local Data Bank (Bank Danych Lokalnych - bdl) API with set of useful tools like quick plotting and generating maps using data from ... 15 2022-02-01
171 ucmerced/merced-cluster Wiki and example on how to use the Merced Cluster. 15 2021-12-02
172 alexkychen/assignPOP Population Assignment using Genetic, Non-genetic or Integrated Data in a Machine-learning Framework. Methods in Ecology and Evolution. 2018;9:439–446. 15 2021-10-27
173 sambofra/bnstruct R package for Bayesian Network Structure Learning 15 2022-01-09
174 jennschilling/books-2021 data visualization of books I read in 2021 14 2022-01-06
175 pdwaggoner/dimension-reduction-CUP Replication files for my book "Modern Dimension Reduction" 14 2022-01-02
176 YaoLab-Bioinfo/LIRBase A comprehensive collection of long inverted repeats in 424 eukaryotic genomes 14 2021-11-04
177 aws-samples/reinvent2020-aim404-productionize-r-using-amazon-sagemaker Customers using R can run simulation and machine learning securely and at scale with Amazon SageMaker while also reducing the cost of development by using the fully elastic resources in the cloud. In ... 14 2021-11-10
178 Statology/R-Guides This repository contains the codes for the R tutorials on statology.org 14 2021-11-03
179 psolymos/the-road-to-progress Step-by-step guide for vectorizing/parallelizing your code 14 2022-03-09
180 FanWangEcon/R4Econ R Code Examples Multi-dimensional/Panel Data 14 2022-02-14
181 Jean-Romain/lidRplugins Extra functions and algorithms for lidR package 14 2022-03-21
182 Shoklan/datacamp A repository for examples and extensions of what I learn from the classes. 14 2022-01-17
183 algorithmiaio/algorithmia-r R Client for Algorithmia Algorithms and Data API 14 2021-11-18
184 gboris/blkbox Data exploration with multiple machine learning algorithms 14 2021-11-28
185 OxfordDemSci/ex2020 Code to replicate 'Quantifying impacts of the COVID-19 pandemic through life expectancy losses: a population-level study of 29 countries' 13 2021-11-01
186 StatisticsNZ/open-data-api A guide to accessing the Stats NZ Open Data API 13 2021-11-04
187 AEADataEditor/docker-r-starter This repo provides instructions on how to build an R docker image that can serve as the basis for interactive or automated reproducible processing 13 2022-02-07
188 ocbe-uio/BayesMallows R-package for Bayesian preference learning with the Mallows rank model. 13 2022-03-31
189 gadenbuie/getcitations R script to extract pandoc citations from markdown text and create local .bib file from a master BibTeX library. 13 2021-11-01
190 wrathematics/DSE512 Course materials for: The Computer Science of Data Science. 12 2022-03-27
191 tesselle/kairos ⌛ Analysis of Chronological Patterns from Archaeological Count Data 12 2022-03-12
192 egr95/R-codacore An R package for learning log-ratio biomarkers from high-throughput sequencing data. 12 2021-12-06
193 idiv-biodiversity/lcvplants Large-scale taxonomic harmonization of plant names by fuzzy matching and synonymy resolution against the Leipzig Plant List as taxonomic backbone. Submission of single names or list of species names i ... 12 2022-03-29
194 abodein/timeOmics Time-Course Multi-Omics data integration 12 2022-03-01
195 OnofriAndreaPG/aomisc Utilities for stat courses 12 2022-03-08
196 hneth/ds4psy Data science for psychologists (ds4psy): R package supporting book and course 12 2022-03-21
197 djnavarro/lsr R package associated with "Learning Statistics with R" 12 2021-12-01
198 rOpenGov/sorvi Algorithms for Finnish open goverment data 12 2022-03-16
199 RGLab/flowStats flowStats: algorithms for flow cytometry data analysis using BioConductor tools 12 2022-03-27
200 tlverse/causalglm Interpretable and model-robust causal inference for heterogeneous treatment effects using generalized linear working models with targeted machine-learning 11 2022-03-03

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