diff --git a/README.md b/README.md index 59638f264c..ad0026cd2a 100644 --- a/README.md +++ b/README.md @@ -179,6 +179,8 @@ To download [SPAdes Linux binaries](http://cab.spbu.ru/files/release3.14.0/SPAde In this case you do not need to run any installation scripts – SPAdes is ready to use. We also suggest adding SPAdes installation directory to the `PATH` variable. []() +Note, that pre-build binaries do not work on new Linux kernels. + ## Downloading SPAdes binaries for Mac diff --git a/assembler/changelog.html b/assembler/changelog.html index 8f9ccbc164..423b495859 100644 --- a/assembler/changelog.html +++ b/assembler/changelog.html @@ -3,6 +3,34 @@

SPAdes Genome Assembler changelog

+

SPAdes 3.14.0, 27 December 2019

+ +

NEW: BiosyntheticSPAdes pipeline for predicting Biosynthetic Gene Clusters.

+ +

NEW: Hybrid transcriptome assembly with rnaSPAdes.

+ +

NEW: Plasmid detection from metagenomic samples.

+ +

NEW: Special --isolate option for assembly of standard datasets with good coverage (>100x).

+ +

NEW: Standalone tool for reads filtration based on k-mer coverage.

+ +

NEW: Standalone tool for estimating approximate number of unique k-mers in reads.

+ +

CHANGE: Improved SPAligner tool.

+ +

CHANGE: Reworked python code, faster sequence transfer between different k-mer stages.

+ +

CHANGE: Multiple performance improvements in graph construction and simplification procedures.

+ +

FIX: BWA aligner failure for large graphs.

+ +

FIX: Failure when additional paired-end libraries with reads shorter than final k-mer length are provided.

+ +

SPAdes 3.13.2, 31 October 2019

+ +

FIX: Incorrect k-mer size estimation in rnaSPAdes.

+

SPAdes 3.13.1, 11 April 2019

CHANGE: Removed BayesHammer from rnaSPAdes pipeline.

diff --git a/assembler/manual.html b/assembler/manual.html index 6195c4799c..6aacf5a5aa 100644 --- a/assembler/manual.html +++ b/assembler/manual.html @@ -151,6 +151,7 @@

Downloading SPAdes Linux binaries

tar -xzf SPAdes-3.14.0-Linux.tar.gz cd SPAdes-3.14.0-Linux/bin/

In this case you do not need to run any installation scripts – SPAdes is ready to use. We also suggest adding SPAdes installation directory to the PATH variable.

+

Note, that pre-build binaries do not work on new Linux kernels.

Downloading SPAdes binaries for Mac

To obtain SPAdes binaries for Mac, go to the directory in which you wish SPAdes to be installed and run: