You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Two-steps repeat resolution (RR) is most memory-hungry for metagenome assembly, especially large-scale ones. I hope to learn pros and cons of RR, whether it is necessary in metagenome assembly, and particularly, disadvantages if RR is disabled in metagenome assembly. Many thanks!
And I found that there are no scaffolds generated if RR is disabled. Is it what you designed?
spades.log
N.A.
params.txt
N.A.
SPAdes version
SPAdes v3.15.5
Operating System
Ubuntu 22.04
Python Version
Python 3.9.12
Method of SPAdes installation
manual
No errors reported in spades.log
Yes
The text was updated successfully, but these errors were encountered:
Description of bug
Two-steps repeat resolution (RR) is most memory-hungry for metagenome assembly, especially large-scale ones. I hope to learn pros and cons of RR, whether it is necessary in metagenome assembly, and particularly, disadvantages if RR is disabled in metagenome assembly. Many thanks!
And I found that there are no scaffolds generated if RR is disabled. Is it what you designed?
spades.log
N.A.
params.txt
N.A.
SPAdes version
SPAdes v3.15.5
Operating System
Ubuntu 22.04
Python Version
Python 3.9.12
Method of SPAdes installation
manual
No errors reported in spades.log
The text was updated successfully, but these errors were encountered: