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== Error == finished abnormally, OS return value: -11 #1277

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efe3506 opened this issue Apr 16, 2024 · 5 comments
Open
1 task done

== Error == finished abnormally, OS return value: -11 #1277

efe3506 opened this issue Apr 16, 2024 · 5 comments
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io Input / output (e.g. due to disk storage) errors

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@efe3506
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efe3506 commented Apr 16, 2024

Description of bug

I'm keep getting this OS return value: -11 error. Does anyone can help?

spades.log

spades.log.gz
spades_test.log.gz

params.txt

params.txt.gz
params_test.txt.gz

SPAdes version

SPAdes_v3.15.5

Operating System

Ubuntu 22.04.4 LTS

Python Version

Python v3.10.12

Method of SPAdes installation

manual

No errors reported in spades.log

  • Yes
@asl asl added the io Input / output (e.g. due to disk storage) errors label Apr 20, 2024
@asl
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asl commented Apr 20, 2024

Hello

Likely the filesystem on /media/efe/6EA8DE95A8DE5AE3/ does not support memory-mapped files.

@adriansh11
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I have the same problem.
spades.log
params.txt

@PAClFlER
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same is here. if it is i/o issue what is the solution?
params.txt
spades.log

@efe3506
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efe3506 commented Apr 22, 2024

I reinstalled with conda and run with conda. Its okey now

@adriansh11
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I reinstalled with conda and run with conda. Its okey now

same. conda really resolved the problem.

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Labels
io Input / output (e.g. due to disk storage) errors
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