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DESCRIPTION
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DESCRIPTION
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Package: mjolnir
Type: Package
Title: MJOLNIR Metabarcoding Joining Obitools & Linkage Networks In R
Version: 3.0.0
Author: Owen S. Wangensteen & Adrià Antich
Maintainer: Owen S. Wangensteen <owenwangensteen@gmail.com> & Adrià Antich <adriantich@gmail.com>
Description: MJOLNIR Metabarcoding Joining Obitools & Linkage Networks In R
A pipeline for processing metabarcoding data including:
- Quality filtering with OBItools3
- Chimaera removal with uchime_denovo
- Denoising with DnoisE
- MOTU clustering with swarm
- Taxonomic assignment with ecotag
- Pseudogene removal with LULU.
License: GPL-3
Depends: parallel,lulu,Biostrings
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.3.1