Loosing too many genes #247
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charlesgwellem
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Thank you for this great tool. I have a mouse single cell RNA seq data set, aligned with the mouse reference genome (mm10,
Ensembl annotation release 91). The data set consists of ten thousand already filtered genes. But when I run correlation in SCENIC, I realise that only 500 TFs are present in my dataset. I think there should be more TFs in my data set. Is there a way I can fix this so I do not loose too many TFs?
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