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I am running GENIE3 in R with 10k cells. I started 2 days ago, and it is still running. I am using a cluster with 20 workers and 200GB of memory. Generally, how many days would it take to finish? Currently, it shows:
Using 423 TFs as potential regulators...
Running GENIE3 part 1
Running GENIE3 part 10
Running GENIE3 part 2
Running GENIE3 part 3
I don't know what the best course of action is because I submitted the bash script, and it will be killed in a few hours.
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I am running GENIE3 in R with 10k cells. I started 2 days ago, and it is still running. I am using a cluster with 20 workers and 200GB of memory. Generally, how many days would it take to finish? Currently, it shows:
Using 423 TFs as potential regulators...
Running GENIE3 part 1
Running GENIE3 part 10
Running GENIE3 part 2
Running GENIE3 part 3
I don't know what the best course of action is because I submitted the bash script, and it will be killed in a few hours.
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