{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":702918570,"defaultBranch":"main","name":"efg-mems","ownerLogin":"algbio","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2023-10-10T08:58:31.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/62098287?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1702513417.0","currentOid":""},"activityList":{"items":[{"before":"29e3d520d518f338494306a8faf02b2dead214c7","after":"85efcb165c45cc91f96ddcfeb8e7abd4597edf49","ref":"refs/heads/mapped-output","pushedAt":"2024-02-16T13:15:39.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"nrizzo","name":"Nicola Rizzo","path":"/nrizzo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23456488?s=80&v=4"},"commit":{"message":"๐Ÿšง FASTA input, decoupled indexing and bdbwt opts","shortMessageHtmlLink":"๐Ÿšง FASTA input, decoupled indexing and bdbwt opts"}},{"before":"7d12d3300fd107d78fd8be42d03f4f5efa6da51f","after":"29e3d520d518f338494306a8faf02b2dead214c7","ref":"refs/heads/mapped-output","pushedAt":"2024-01-25T13:18:50.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"nrizzo","name":"Nicola Rizzo","path":"/nrizzo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23456488?s=80&v=4"},"commit":{"message":"โ™ป๏ธ refactoring of function find_mems","shortMessageHtmlLink":"โ™ป๏ธ refactoring of function find_mems"}},{"before":"319f31b5a7fe0d61924f6e65c79f5955d4aafb93","after":"7d12d3300fd107d78fd8be42d03f4f5efa6da51f","ref":"refs/heads/mapped-output","pushedAt":"2024-01-02T09:34:53.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"nrizzo","name":"Nicola Rizzo","path":"/nrizzo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23456488?s=80&v=4"},"commit":{"message":"โœจ GAF output (and fixed MEM counting/longest MEM)","shortMessageHtmlLink":"โœจ GAF output (and fixed MEM counting/longest MEM)"}},{"before":"9bf47cfc35869a754d17517ad8dd86a102ed90a3","after":"319f31b5a7fe0d61924f6e65c79f5955d4aafb93","ref":"refs/heads/mapped-output","pushedAt":"2023-12-18T12:00:50.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"nrizzo","name":"Nicola Rizzo","path":"/nrizzo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23456488?s=80&v=4"},"commit":{"message":"๐Ÿšง prototype GAF/MEMS output","shortMessageHtmlLink":"๐Ÿšง prototype GAF/MEMS output"}},{"before":null,"after":"9bf47cfc35869a754d17517ad8dd86a102ed90a3","ref":"refs/heads/mapped-output","pushedAt":"2023-12-14T00:23:37.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"nrizzo","name":"Nicola Rizzo","path":"/nrizzo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23456488?s=80&v=4"},"commit":{"message":"๐Ÿš‘๏ธ fixed edge suf/pre MEMs, source/sink handling","shortMessageHtmlLink":"๐Ÿš‘๏ธ fixed edge suf/pre MEMs, source/sink handling"}},{"before":"a2aa65334209e12281da54ac227d7ed39487e225","after":"9bf47cfc35869a754d17517ad8dd86a102ed90a3","ref":"refs/heads/main","pushedAt":"2023-12-13T11:29:08.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"nrizzo","name":"Nicola Rizzo","path":"/nrizzo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23456488?s=80&v=4"},"commit":{"message":"๐Ÿš‘๏ธ fixed edge suf/pre MEMs, source/sink handling","shortMessageHtmlLink":"๐Ÿš‘๏ธ fixed edge suf/pre MEMs, source/sink handling"}},{"before":"f5ac2f616b4646ab3ad36e3a532ab1a2aad3a137","after":"a2aa65334209e12281da54ac227d7ed39487e225","ref":"refs/heads/main","pushedAt":"2023-11-30T13:31:11.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"velimakinen","name":null,"path":"/velimakinen","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/51906536?s=80&v=4"},"commit":{"message":"Update README.md\n\nFixed a typo","shortMessageHtmlLink":"Update README.md"}},{"before":"715054543a4ccf39f510c5fc8ce3e27aecc0f081","after":"f5ac2f616b4646ab3ad36e3a532ab1a2aad3a137","ref":"refs/heads/main","pushedAt":"2023-10-26T14:22:36.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"velimakinen","name":null,"path":"/velimakinen","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/51906536?s=80&v=4"},"commit":{"message":"Update LICENSE","shortMessageHtmlLink":"Update LICENSE"}},{"before":"b36645f51a7582332ec5f2b4ca654ef3895ebc65","after":"715054543a4ccf39f510c5fc8ce3e27aecc0f081","ref":"refs/heads/main","pushedAt":"2023-10-23T12:53:54.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"velimakinen","name":null,"path":"/velimakinen","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/51906536?s=80&v=4"},"commit":{"message":"Update README.md\n\nAdded instruction how to compare to br-index MEM finding.","shortMessageHtmlLink":"Update README.md"}},{"before":"076dcded527760d31fc569e8fd1c0e68c85fde08","after":"b36645f51a7582332ec5f2b4ca654ef3895ebc65","ref":"refs/heads/main","pushedAt":"2023-10-23T12:33:21.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"velimakinen","name":null,"path":"/velimakinen","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/51906536?s=80&v=4"},"commit":{"message":"Update README.md\n\nPointint to a closed issue for how to install br-index.","shortMessageHtmlLink":"Update README.md"}},{"before":"708ec7c078552330bf160295a3555414472318e6","after":"076dcded527760d31fc569e8fd1c0e68c85fde08","ref":"refs/heads/main","pushedAt":"2023-10-23T12:27:04.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"velimakinen","name":null,"path":"/velimakinen","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/51906536?s=80&v=4"},"commit":{"message":"Update efg-mems.cpp\n\nMaking ambiguous leftchar/righchar symmetric","shortMessageHtmlLink":"Update efg-mems.cpp"}},{"before":"667d50592ed2631a6a41bc55f77fa33a1e9b8c1e","after":"708ec7c078552330bf160295a3555414472318e6","ref":"refs/heads/main","pushedAt":"2023-10-23T12:23:42.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"velimakinen","name":null,"path":"/velimakinen","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/51906536?s=80&v=4"},"commit":{"message":"Update bdbwt2brindex.hpp\n\nFixing reference to bdbwt","shortMessageHtmlLink":"Update bdbwt2brindex.hpp"}},{"before":"c0dd6905a6dd1a1990e46bdbd55e4429bdde9674","after":"667d50592ed2631a6a41bc55f77fa33a1e9b8c1e","ref":"refs/heads/main","pushedAt":"2023-10-23T12:19:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"velimakinen","name":null,"path":"/velimakinen","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/51906536?s=80&v=4"},"commit":{"message":"Fixed some instructions in README","shortMessageHtmlLink":"Fixed some instructions in README"}},{"before":"a6af575c07fb42e84b4afd1b4522aec78c396588","after":"c0dd6905a6dd1a1990e46bdbd55e4429bdde9674","ref":"refs/heads/main","pushedAt":"2023-10-19T09:54:33.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"velimakinen","name":null,"path":"/velimakinen","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/51906536?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"fbe37f8043bc2829539733d42611538e98d50bb3","after":"a6af575c07fb42e84b4afd1b4522aec78c396588","ref":"refs/heads/main","pushedAt":"2023-10-19T09:44:20.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"velimakinen","name":null,"path":"/velimakinen","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/51906536?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"1838faeebc36c2be713e0f730fae95af1bacf711","after":"fbe37f8043bc2829539733d42611538e98d50bb3","ref":"refs/heads/main","pushedAt":"2023-10-19T09:43:55.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"velimakinen","name":null,"path":"/velimakinen","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/51906536?s=80&v=4"},"commit":{"message":"Instructions how to download input files and shell scripts","shortMessageHtmlLink":"Instructions how to download input files and shell scripts"}},{"before":"b9fcbf005c8432e333bd935d5b95f3027debef3f","after":"1838faeebc36c2be713e0f730fae95af1bacf711","ref":"refs/heads/main","pushedAt":"2023-10-19T09:36:42.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"velimakinen","name":null,"path":"/velimakinen","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/51906536?s=80&v=4"},"commit":{"message":"Delete inputs.zip","shortMessageHtmlLink":"Delete inputs.zip"}},{"before":"b8c8db3ad29aa2387e3b2445d2866eb6223f7f26","after":"b9fcbf005c8432e333bd935d5b95f3027debef3f","ref":"refs/heads/main","pushedAt":"2023-10-18T15:11:02.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"velimakinen","name":null,"path":"/velimakinen","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/51906536?s=80&v=4"},"commit":{"message":"Queries as fasta and suffix/prefix edge MEMs to include node MEMs\n\nAdding support to giving queries in fasta format. Commenting out full node MEM reporting, and changing prefix and suffix edge MEMs to include full node MEMs as special cases.","shortMessageHtmlLink":"Queries as fasta and suffix/prefix edge MEMs to include node MEMs"}},{"before":"08f4da0ae3c40821658030b5a0bccace9d885e3d","after":"b8c8db3ad29aa2387e3b2445d2866eb6223f7f26","ref":"refs/heads/main","pushedAt":"2023-10-10T09:07:22.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"velimakinen","name":null,"path":"/velimakinen","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/51906536?s=80&v=4"},"commit":{"message":"Installation instructions","shortMessageHtmlLink":"Installation instructions"}},{"before":"7fc1315c8b52dd93c064c009fe2f8be1567da029","after":"08f4da0ae3c40821658030b5a0bccace9d885e3d","ref":"refs/heads/main","pushedAt":"2023-10-10T08:59:50.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"velimakinen","name":null,"path":"/velimakinen","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/51906536?s=80&v=4"},"commit":{"message":"Add files via upload","shortMessageHtmlLink":"Add files via upload"}},{"before":null,"after":"7fc1315c8b52dd93c064c009fe2f8be1567da029","ref":"refs/heads/main","pushedAt":"2023-10-10T08:58:32.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"velimakinen","name":null,"path":"/velimakinen","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/51906536?s=80&v=4"},"commit":{"message":"Initial commit","shortMessageHtmlLink":"Initial commit"}}],"hasNextPage":false,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAD_JbbxQA","startCursor":null,"endCursor":null}},"title":"Activity ยท algbio/efg-mems"}