dag.svg

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<!-- Title: snakemake_dag Pages: 1 -->
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<!-- 1 -->
<g id="node2" class="node">
<title>1</title>
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<!-- 1&#45;&gt;0 -->
<g id="edge1" class="edge">
<title>1&#45;&gt;0</title>
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<!-- 13 -->
<g id="node14" class="node">
<title>13</title>
<path fill="none" stroke="#b6d856" stroke-width="2" stroke-dasharray="5,2" d="M211.28,-180C211.28,-180 101.28,-180 101.28,-180 95.28,-180 89.28,-174 89.28,-168 89.28,-168 89.28,-156 89.28,-156 89.28,-150 95.28,-144 101.28,-144 101.28,-144 211.28,-144 211.28,-144 217.28,-144 223.28,-150 223.28,-156 223.28,-156 223.28,-168 223.28,-168 223.28,-174 217.28,-180 211.28,-180"/>
<text text-anchor="middle" x="156.28" y="-159.5" font-family="sans" font-size="10.00">GATK_DepthofCoverage</text>
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<!-- 1&#45;&gt;13 -->
<g id="edge22" class="edge">
<title>1&#45;&gt;13</title>
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<polygon fill="grey" stroke="grey" stroke-width="2" points="187.26,-183.7 177.3,-180.1 182.84,-189.13 187.26,-183.7"/>
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<!-- 17 -->
<g id="node18" class="node">
<title>17</title>
<path fill="none" stroke="#d87556" stroke-width="2" stroke-dasharray="5,2" d="M544.78,-180C544.78,-180 503.78,-180 503.78,-180 497.78,-180 491.78,-174 491.78,-168 491.78,-168 491.78,-156 491.78,-156 491.78,-150 497.78,-144 503.78,-144 503.78,-144 544.78,-144 544.78,-144 550.78,-144 556.78,-150 556.78,-156 556.78,-156 556.78,-168 556.78,-168 556.78,-174 550.78,-180 544.78,-180"/>
<text text-anchor="middle" x="524.28" y="-159.5" font-family="sans" font-size="10.00">freebayes</text>
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<!-- 1&#45;&gt;17 -->
<g id="edge30" class="edge">
<title>1&#45;&gt;17</title>
<path fill="none" stroke="grey" stroke-width="2" d="M289.58,-225.15C336.54,-216.8 410.58,-202.09 481.78,-180.23"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="482.85,-183.56 491.35,-177.24 480.76,-176.88 482.85,-183.56"/>
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<!-- 18 -->
<g id="node19" class="node">
<title>18</title>
<path fill="none" stroke="#78d856" stroke-width="2" stroke-dasharray="5,2" d="M461.78,-180C461.78,-180 358.78,-180 358.78,-180 352.78,-180 346.78,-174 346.78,-168 346.78,-168 346.78,-156 346.78,-156 346.78,-150 352.78,-144 358.78,-144 358.78,-144 461.78,-144 461.78,-144 467.78,-144 473.78,-150 473.78,-156 473.78,-156 473.78,-168 473.78,-168 473.78,-174 467.78,-180 461.78,-180"/>
<text text-anchor="middle" x="410.28" y="-159.5" font-family="sans" font-size="10.00">GATK_HaplotypeCaller</text>
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<!-- 1&#45;&gt;18 -->
<g id="edge34" class="edge">
<title>1&#45;&gt;18</title>
<path fill="none" stroke="grey" stroke-width="2" d="M283.38,-215.88C306.45,-206.26 335.42,-194.19 359.85,-184.01"/>
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<!-- 19 -->
<g id="node20" class="node">
<title>19</title>
<path fill="none" stroke="#56d87b" stroke-width="2" stroke-dasharray="5,2" d="M316.78,-180C316.78,-180 253.78,-180 253.78,-180 247.78,-180 241.78,-174 241.78,-168 241.78,-168 241.78,-156 241.78,-156 241.78,-150 247.78,-144 253.78,-144 253.78,-144 316.78,-144 316.78,-144 322.78,-144 328.78,-150 328.78,-156 328.78,-156 328.78,-168 328.78,-168 328.78,-174 322.78,-180 316.78,-180"/>
<text text-anchor="middle" x="285.28" y="-159.5" font-family="sans" font-size="10.00">GATK_Mutect2</text>
</g>
<!-- 1&#45;&gt;19 -->
<g id="edge37" class="edge">
<title>1&#45;&gt;19</title>
<path fill="none" stroke="grey" stroke-width="2" d="M252.91,-215.7C257.91,-207.56 263.97,-197.69 269.5,-188.7"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="272.52,-190.46 274.78,-180.1 266.56,-186.79 272.52,-190.46"/>
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<!-- 24 -->
<g id="node25" class="node">
<title>24</title>
<path fill="none" stroke="#59d856" stroke-width="2" stroke-dasharray="5,2" d="M59.28,-180C59.28,-180 29.28,-180 29.28,-180 23.28,-180 17.28,-174 17.28,-168 17.28,-168 17.28,-156 17.28,-156 17.28,-150 23.28,-144 29.28,-144 29.28,-144 59.28,-144 59.28,-144 65.28,-144 71.28,-150 71.28,-156 71.28,-156 71.28,-168 71.28,-168 71.28,-174 65.28,-180 59.28,-180"/>
<text text-anchor="middle" x="44.28" y="-159.5" font-family="sans" font-size="10.00">instrain</text>
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<!-- 1&#45;&gt;24 -->
<g id="edge51" class="edge">
<title>1&#45;&gt;24</title>
<path fill="none" stroke="grey" stroke-width="2" d="M194.94,-219.22C164.57,-210 124.2,-197.02 81.16,-180.13"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="82.23,-176.79 71.65,-176.35 79.65,-183.3 82.23,-176.79"/>
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<!-- 2 -->
<g id="node3" class="node">
<title>2</title>
<path fill="none" stroke="#56d89a" stroke-width="2" stroke-dasharray="5,2" d="M367.28,-324C367.28,-324 267.28,-324 267.28,-324 261.28,-324 255.28,-318 255.28,-312 255.28,-312 255.28,-300 255.28,-300 255.28,-294 261.28,-288 267.28,-288 267.28,-288 367.28,-288 367.28,-288 373.28,-288 379.28,-294 379.28,-300 379.28,-300 379.28,-312 379.28,-312 379.28,-318 373.28,-324 367.28,-324"/>
<text text-anchor="middle" x="317.28" y="-303.5" font-family="sans" font-size="10.00">GATK_MarkDuplicates</text>
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<!-- 2&#45;&gt;1 -->
<g id="edge10" class="edge">
<title>2&#45;&gt;1</title>
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<polygon fill="grey" stroke="grey" stroke-width="2" points="270.31,-256.37 260.61,-252.1 265.53,-261.49 270.31,-256.37"/>
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<!-- 2&#45;&gt;13 -->
<g id="edge20" class="edge">
<title>2&#45;&gt;13</title>
<path fill="none" stroke="grey" stroke-width="2" d="M255.11,-291.78C230.85,-283.84 204.54,-271.37 186.28,-252 170.43,-235.18 162.94,-209.7 159.4,-190.31"/>
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<!-- 2&#45;&gt;17 -->
<g id="edge29" class="edge">
<title>2&#45;&gt;17</title>
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<!-- 2&#45;&gt;18 -->
<g id="edge32" class="edge">
<title>2&#45;&gt;18</title>
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<!-- 2&#45;&gt;19 -->
<g id="edge35" class="edge">
<title>2&#45;&gt;19</title>
<path fill="none" stroke="grey" stroke-width="2" d="M313.79,-287.9C310.09,-269.96 304,-240.95 298.28,-216 296.35,-207.56 294.14,-198.39 292.09,-190.09"/>
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<!-- 2&#45;&gt;24 -->
<g id="edge50" class="edge">
<title>2&#45;&gt;24</title>
<path fill="none" stroke="grey" stroke-width="2" d="M255.12,-288.44C226.31,-279.56 192.15,-267.28 163.28,-252 129.02,-233.86 93.97,-206.35 70.87,-186.72"/>
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<!-- 3 -->
<g id="node4" class="node">
<title>3</title>
<path fill="none" stroke="#d8b456" stroke-width="2" stroke-dasharray="5,2" d="M494.28,-396C494.28,-396 438.28,-396 438.28,-396 432.28,-396 426.28,-390 426.28,-384 426.28,-384 426.28,-372 426.28,-372 426.28,-366 432.28,-360 438.28,-360 438.28,-360 494.28,-360 494.28,-360 500.28,-360 506.28,-366 506.28,-372 506.28,-372 506.28,-384 506.28,-384 506.28,-390 500.28,-396 494.28,-396"/>
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</g>
<!-- 3&#45;&gt;2 -->
<g id="edge11" class="edge">
<title>3&#45;&gt;2</title>
<path fill="none" stroke="grey" stroke-width="2" d="M429.83,-359.88C409.65,-350.39 384.36,-338.51 362.88,-328.42"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="364.15,-325.15 353.61,-324.07 361.18,-331.49 364.15,-325.15"/>
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<!-- 4 -->
<g id="node5" class="node">
<title>4</title>
<path fill="none" stroke="#d85656" stroke-width="2" stroke-dasharray="5,2" d="M503.28,-468C503.28,-468 429.28,-468 429.28,-468 423.28,-468 417.28,-462 417.28,-456 417.28,-456 417.28,-444 417.28,-444 417.28,-438 423.28,-432 429.28,-432 429.28,-432 503.28,-432 503.28,-432 509.28,-432 515.28,-438 515.28,-444 515.28,-444 515.28,-456 515.28,-456 515.28,-462 509.28,-468 503.28,-468"/>
<text text-anchor="middle" x="466.28" y="-447.5" font-family="sans" font-size="10.00">trimmomatic_pe</text>
</g>
<!-- 4&#45;&gt;3 -->
<g id="edge12" class="edge">
<title>4&#45;&gt;3</title>
<path fill="none" stroke="grey" stroke-width="2" d="M466.28,-431.7C466.28,-423.98 466.28,-414.71 466.28,-406.11"/>
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<!-- 5 -->
<g id="node6" class="node">
<title>5</title>
<path fill="none" stroke="#97d856" stroke-width="2" stroke-dasharray="5,2" d="M509.28,-540C509.28,-540 423.28,-540 423.28,-540 417.28,-540 411.28,-534 411.28,-528 411.28,-528 411.28,-516 411.28,-516 411.28,-510 417.28,-504 423.28,-504 423.28,-504 509.28,-504 509.28,-504 515.28,-504 521.28,-510 521.28,-516 521.28,-516 521.28,-528 521.28,-528 521.28,-534 515.28,-540 509.28,-540"/>
<text text-anchor="middle" x="466.28" y="-525" font-family="sans" font-size="10.00">Remove_human</text>
<text text-anchor="middle" x="466.28" y="-514" font-family="sans" font-size="10.00">sample: MBR00226</text>
</g>
<!-- 5&#45;&gt;4 -->
<g id="edge14" class="edge">
<title>5&#45;&gt;4</title>
<path fill="none" stroke="grey" stroke-width="2" d="M466.28,-503.7C466.28,-495.98 466.28,-486.71 466.28,-478.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="469.78,-478.1 466.28,-468.1 462.78,-478.1 469.78,-478.1"/>
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<!-- 6 -->
<g id="node7" class="node">
<title>6</title>
<path fill="none" stroke="#56d8b9" stroke-width="2" stroke-dasharray="5,2" d="M691.28,-468C691.28,-468 635.28,-468 635.28,-468 629.28,-468 623.28,-462 623.28,-456 623.28,-456 623.28,-444 623.28,-444 623.28,-438 629.28,-432 635.28,-432 635.28,-432 691.28,-432 691.28,-432 697.28,-432 703.28,-438 703.28,-444 703.28,-444 703.28,-456 703.28,-456 703.28,-462 697.28,-468 691.28,-468"/>
<text text-anchor="middle" x="663.28" y="-447.5" font-family="sans" font-size="10.00">bowtie2Build</text>
</g>
<!-- 6&#45;&gt;3 -->
<g id="edge13" class="edge">
<title>6&#45;&gt;3</title>
<path fill="none" stroke="grey" stroke-width="2" d="M622.94,-434.67C592,-423.67 549.13,-408.44 516.06,-396.69"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="517.17,-393.37 506.57,-393.32 514.82,-399.96 517.17,-393.37"/>
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<!-- 9 -->
<g id="node10" class="node">
<title>9</title>
<path fill="none" stroke="#d8b456" stroke-width="2" stroke-dasharray="5,2" d="M843.28,-396C843.28,-396 787.28,-396 787.28,-396 781.28,-396 775.28,-390 775.28,-384 775.28,-384 775.28,-372 775.28,-372 775.28,-366 781.28,-360 787.28,-360 787.28,-360 843.28,-360 843.28,-360 849.28,-360 855.28,-366 855.28,-372 855.28,-372 855.28,-384 855.28,-384 855.28,-390 849.28,-396 843.28,-396"/>
<text text-anchor="middle" x="815.28" y="-375.5" font-family="sans" font-size="10.00">bowtie2Align</text>
</g>
<!-- 6&#45;&gt;9 -->
<g id="edge18" class="edge">
<title>6&#45;&gt;9</title>
<path fill="none" stroke="grey" stroke-width="2" d="M700.47,-431.88C721.15,-422.35 747.09,-410.41 769.07,-400.28"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="770.6,-403.43 778.22,-396.07 767.67,-397.07 770.6,-403.43"/>
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<!-- 7 -->
<g id="node8" class="node">
<title>7</title>
<path fill="none" stroke="#567bd8" stroke-width="2" stroke-dasharray="5,2" d="M981.28,-252C981.28,-252 911.28,-252 911.28,-252 905.28,-252 899.28,-246 899.28,-240 899.28,-240 899.28,-228 899.28,-228 899.28,-222 905.28,-216 911.28,-216 911.28,-216 981.28,-216 981.28,-216 987.28,-216 993.28,-222 993.28,-228 993.28,-228 993.28,-240 993.28,-240 993.28,-246 987.28,-252 981.28,-252"/>
<text text-anchor="middle" x="946.28" y="-231.5" font-family="sans" font-size="10.00">samtools_index</text>
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<!-- 7&#45;&gt;0 -->
<g id="edge2" class="edge">
<title>7&#45;&gt;0</title>
<path fill="none" stroke="grey" stroke-width="2" d="M949.31,-215.99C951.77,-196.8 952.79,-165.47 938.28,-144 867,-38.48 698.15,-21.26 622.76,-18.98"/>
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<!-- 15 -->
<g id="node16" class="node">
<title>15</title>
<path fill="none" stroke="#b6d856" stroke-width="2" stroke-dasharray="5,2" d="M1107.28,-180C1107.28,-180 997.28,-180 997.28,-180 991.28,-180 985.28,-174 985.28,-168 985.28,-168 985.28,-156 985.28,-156 985.28,-150 991.28,-144 997.28,-144 997.28,-144 1107.28,-144 1107.28,-144 1113.28,-144 1119.28,-150 1119.28,-156 1119.28,-156 1119.28,-168 1119.28,-168 1119.28,-174 1113.28,-180 1107.28,-180"/>
<text text-anchor="middle" x="1052.28" y="-159.5" font-family="sans" font-size="10.00">GATK_DepthofCoverage</text>
</g>
<!-- 7&#45;&gt;15 -->
<g id="edge25" class="edge">
<title>7&#45;&gt;15</title>
<path fill="none" stroke="grey" stroke-width="2" d="M972.21,-215.88C985.95,-206.81 1002.99,-195.55 1017.82,-185.76"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1019.84,-188.62 1026.25,-180.19 1015.98,-182.78 1019.84,-188.62"/>
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<!-- 21 -->
<g id="node22" class="node">
<title>21</title>
<path fill="none" stroke="#d87556" stroke-width="2" stroke-dasharray="5,2" d="M916.78,-180C916.78,-180 875.78,-180 875.78,-180 869.78,-180 863.78,-174 863.78,-168 863.78,-168 863.78,-156 863.78,-156 863.78,-150 869.78,-144 875.78,-144 875.78,-144 916.78,-144 916.78,-144 922.78,-144 928.78,-150 928.78,-156 928.78,-156 928.78,-168 928.78,-168 928.78,-174 922.78,-180 916.78,-180"/>
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<!-- 7&#45;&gt;21 -->
<g id="edge42" class="edge">
<title>7&#45;&gt;21</title>
<path fill="none" stroke="grey" stroke-width="2" d="M933.92,-215.7C928.05,-207.47 920.91,-197.48 914.44,-188.42"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="917.16,-186.21 908.5,-180.1 911.47,-190.28 917.16,-186.21"/>
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<!-- 22 -->
<g id="node23" class="node">
<title>22</title>
<path fill="none" stroke="#78d856" stroke-width="2" stroke-dasharray="5,2" d="M728.78,-180C728.78,-180 625.78,-180 625.78,-180 619.78,-180 613.78,-174 613.78,-168 613.78,-168 613.78,-156 613.78,-156 613.78,-150 619.78,-144 625.78,-144 625.78,-144 728.78,-144 728.78,-144 734.78,-144 740.78,-150 740.78,-156 740.78,-156 740.78,-168 740.78,-168 740.78,-174 734.78,-180 728.78,-180"/>
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<!-- 7&#45;&gt;22 -->
<g id="edge46" class="edge">
<title>7&#45;&gt;22</title>
<path fill="none" stroke="grey" stroke-width="2" d="M899.12,-220.73C858.11,-210.06 798.03,-194.42 750.73,-182.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="751.4,-178.67 740.84,-179.54 749.63,-185.44 751.4,-178.67"/>
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<!-- 23 -->
<g id="node24" class="node">
<title>23</title>
<path fill="none" stroke="#56d87b" stroke-width="2" stroke-dasharray="5,2" d="M833.78,-180C833.78,-180 770.78,-180 770.78,-180 764.78,-180 758.78,-174 758.78,-168 758.78,-168 758.78,-156 758.78,-156 758.78,-150 764.78,-144 770.78,-144 770.78,-144 833.78,-144 833.78,-144 839.78,-144 845.78,-150 845.78,-156 845.78,-156 845.78,-168 845.78,-168 845.78,-174 839.78,-180 833.78,-180"/>
<text text-anchor="middle" x="802.28" y="-159.5" font-family="sans" font-size="10.00">GATK_Mutect2</text>
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<!-- 7&#45;&gt;23 -->
<g id="edge49" class="edge">
<title>7&#45;&gt;23</title>
<path fill="none" stroke="grey" stroke-width="2" d="M911.06,-215.88C891.71,-206.47 867.51,-194.71 846.86,-184.67"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="848.17,-181.41 837.65,-180.19 845.11,-187.71 848.17,-181.41"/>
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<!-- 25 -->
<g id="node26" class="node">
<title>25</title>
<path fill="none" stroke="#59d856" stroke-width="2" stroke-dasharray="5,2" d="M1179.28,-180C1179.28,-180 1149.28,-180 1149.28,-180 1143.28,-180 1137.28,-174 1137.28,-168 1137.28,-168 1137.28,-156 1137.28,-156 1137.28,-150 1143.28,-144 1149.28,-144 1149.28,-144 1179.28,-144 1179.28,-144 1185.28,-144 1191.28,-150 1191.28,-156 1191.28,-156 1191.28,-168 1191.28,-168 1191.28,-174 1185.28,-180 1179.28,-180"/>
<text text-anchor="middle" x="1164.28" y="-159.5" font-family="sans" font-size="10.00">instrain</text>
</g>
<!-- 7&#45;&gt;25 -->
<g id="edge54" class="edge">
<title>7&#45;&gt;25</title>
<path fill="none" stroke="grey" stroke-width="2" d="M993.33,-221.48C1028.3,-212.44 1077.21,-198.75 1127.55,-180.01"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1128.84,-183.26 1136.96,-176.45 1126.37,-176.71 1128.84,-183.26"/>
</g>
<!-- 8 -->
<g id="node9" class="node">
<title>8</title>
<path fill="none" stroke="#56d89a" stroke-width="2" stroke-dasharray="5,2" d="M921.28,-324C921.28,-324 821.28,-324 821.28,-324 815.28,-324 809.28,-318 809.28,-312 809.28,-312 809.28,-300 809.28,-300 809.28,-294 815.28,-288 821.28,-288 821.28,-288 921.28,-288 921.28,-288 927.28,-288 933.28,-294 933.28,-300 933.28,-300 933.28,-312 933.28,-312 933.28,-318 927.28,-324 921.28,-324"/>
<text text-anchor="middle" x="871.28" y="-303.5" font-family="sans" font-size="10.00">GATK_MarkDuplicates</text>
</g>
<!-- 8&#45;&gt;7 -->
<g id="edge15" class="edge">
<title>8&#45;&gt;7</title>
<path fill="none" stroke="grey" stroke-width="2" d="M889.82,-287.7C899.09,-279.05 910.45,-268.45 920.54,-259.03"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="923.03,-261.49 927.96,-252.1 918.26,-256.37 923.03,-261.49"/>
</g>
<!-- 8&#45;&gt;15 -->
<g id="edge23" class="edge">
<title>8&#45;&gt;15</title>
<path fill="none" stroke="grey" stroke-width="2" d="M933.4,-289.43C956.95,-281.22 982.76,-269.18 1002.28,-252 1021.32,-235.25 1034.69,-209.43 1042.79,-189.9"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1046.14,-190.93 1046.54,-180.35 1039.63,-188.37 1046.14,-190.93"/>
</g>
<!-- 8&#45;&gt;21 -->
<g id="edge41" class="edge">
<title>8&#45;&gt;21</title>
<path fill="none" stroke="grey" stroke-width="2" d="M874.3,-287.87C878.56,-263.67 886.39,-219.21 891.46,-190.39"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="894.97,-190.64 893.26,-180.19 888.08,-189.43 894.97,-190.64"/>
</g>
<!-- 8&#45;&gt;22 -->
<g id="edge44" class="edge">
<title>8&#45;&gt;22</title>
<path fill="none" stroke="grey" stroke-width="2" d="M847.88,-287.87C813.22,-262.5 748.13,-214.85 709.14,-186.32"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="710.9,-183.27 700.77,-180.19 706.77,-188.92 710.9,-183.27"/>
</g>
<!-- 8&#45;&gt;23 -->
<g id="edge47" class="edge">
<title>8&#45;&gt;23</title>
<path fill="none" stroke="grey" stroke-width="2" d="M862.96,-287.87C851.05,-263.35 829.02,-218.03 815.04,-189.26"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="818.15,-187.65 810.64,-180.19 811.86,-190.71 818.15,-187.65"/>
</g>
<!-- 8&#45;&gt;25 -->
<g id="edge53" class="edge">
<title>8&#45;&gt;25</title>
<path fill="none" stroke="grey" stroke-width="2" d="M933.53,-288.2C963.23,-279.17 998.85,-266.82 1029.28,-252 1067.31,-233.48 1107.35,-205.92 1133.85,-186.39"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1136.03,-189.13 1141.96,-180.35 1131.85,-183.51 1136.03,-189.13"/>
</g>
<!-- 9&#45;&gt;8 -->
<g id="edge16" class="edge">
<title>9&#45;&gt;8</title>
<path fill="none" stroke="grey" stroke-width="2" d="M829.13,-359.7C835.77,-351.39 843.86,-341.28 851.17,-332.14"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="854.09,-334.1 857.6,-324.1 848.62,-329.73 854.09,-334.1"/>
</g>
<!-- 10 -->
<g id="node11" class="node">
<title>10</title>
<path fill="none" stroke="#d85656" stroke-width="2" stroke-dasharray="5,2" d="M852.28,-468C852.28,-468 778.28,-468 778.28,-468 772.28,-468 766.28,-462 766.28,-456 766.28,-456 766.28,-444 766.28,-444 766.28,-438 772.28,-432 778.28,-432 778.28,-432 852.28,-432 852.28,-432 858.28,-432 864.28,-438 864.28,-444 864.28,-444 864.28,-456 864.28,-456 864.28,-462 858.28,-468 852.28,-468"/>
<text text-anchor="middle" x="815.28" y="-447.5" font-family="sans" font-size="10.00">trimmomatic_pe</text>
</g>
<!-- 10&#45;&gt;9 -->
<g id="edge17" class="edge">
<title>10&#45;&gt;9</title>
<path fill="none" stroke="grey" stroke-width="2" d="M815.28,-431.7C815.28,-423.98 815.28,-414.71 815.28,-406.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="818.78,-406.1 815.28,-396.1 811.78,-406.1 818.78,-406.1"/>
</g>
<!-- 11 -->
<g id="node12" class="node">
<title>11</title>
<path fill="none" stroke="#97d856" stroke-width="2" stroke-dasharray="5,2" d="M858.28,-540C858.28,-540 772.28,-540 772.28,-540 766.28,-540 760.28,-534 760.28,-528 760.28,-528 760.28,-516 760.28,-516 760.28,-510 766.28,-504 772.28,-504 772.28,-504 858.28,-504 858.28,-504 864.28,-504 870.28,-510 870.28,-516 870.28,-516 870.28,-528 870.28,-528 870.28,-534 864.28,-540 858.28,-540"/>
<text text-anchor="middle" x="815.28" y="-525" font-family="sans" font-size="10.00">Remove_human</text>
<text text-anchor="middle" x="815.28" y="-514" font-family="sans" font-size="10.00">sample: MBR00253</text>
</g>
<!-- 11&#45;&gt;10 -->
<g id="edge19" class="edge">
<title>11&#45;&gt;10</title>
<path fill="none" stroke="grey" stroke-width="2" d="M815.28,-503.7C815.28,-495.98 815.28,-486.71 815.28,-478.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="818.78,-478.1 815.28,-468.1 811.78,-478.1 818.78,-478.1"/>
</g>
<!-- 12 -->
<g id="node13" class="node">
<title>12</title>
<path fill="none" stroke="#569ad8" stroke-width="2" stroke-dasharray="5,2" d="M619.28,-252C619.28,-252 551.28,-252 551.28,-252 545.28,-252 539.28,-246 539.28,-240 539.28,-240 539.28,-228 539.28,-228 539.28,-222 545.28,-216 551.28,-216 551.28,-216 619.28,-216 619.28,-216 625.28,-216 631.28,-222 631.28,-228 631.28,-228 631.28,-240 631.28,-240 631.28,-246 625.28,-252 619.28,-252"/>
<text text-anchor="middle" x="585.28" y="-231.5" font-family="sans" font-size="10.00">samtools_faidx</text>
</g>
<!-- 12&#45;&gt;0 -->
<g id="edge3" class="edge">
<title>12&#45;&gt;0</title>
<path fill="none" stroke="grey" stroke-width="2" d="M585.28,-215.85C585.28,-178.83 585.28,-91.18 585.28,-46.39"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="588.78,-46.23 585.28,-36.23 581.78,-46.23 588.78,-46.23"/>
</g>
<!-- 12&#45;&gt;17 -->
<g id="edge31" class="edge">
<title>12&#45;&gt;17</title>
<path fill="none" stroke="grey" stroke-width="2" d="M570.2,-215.7C562.89,-207.3 553.97,-197.07 545.95,-187.86"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="548.4,-185.34 539.19,-180.1 543.12,-189.94 548.4,-185.34"/>
</g>
<!-- 12&#45;&gt;21 -->
<g id="edge43" class="edge">
<title>12&#45;&gt;21</title>
<path fill="none" stroke="grey" stroke-width="2" d="M631.34,-226.82C683.57,-219.18 771.24,-204.46 853.61,-180.23"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="854.8,-183.53 863.37,-177.31 852.79,-176.82 854.8,-183.53"/>
</g>
<!-- 12&#45;&gt;24 -->
<g id="edge52" class="edge">
<title>12&#45;&gt;24</title>
<path fill="none" stroke="grey" stroke-width="2" d="M539.03,-223.87C523.57,-221.04 506.23,-218.12 490.28,-216 312.24,-192.3 258.78,-226.52 81.34,-179.7"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="81.99,-176.25 71.42,-177.03 80.17,-183.01 81.99,-176.25"/>
</g>
<!-- 12&#45;&gt;25 -->
<g id="edge55" class="edge">
<title>12&#45;&gt;25</title>
<path fill="none" stroke="grey" stroke-width="2" d="M631.45,-230.53C741.49,-224.33 1017.63,-206.83 1127.36,-179.58"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1128.36,-182.94 1137.14,-177 1126.58,-176.17 1128.36,-182.94"/>
</g>
<!-- 13&#45;&gt;0 -->
<g id="edge4" class="edge">
<title>13&#45;&gt;0</title>
<path fill="none" stroke="grey" stroke-width="2" d="M200.87,-143.88C249.92,-125.27 331.24,-95.11 402.28,-72 452.45,-55.68 511.15,-39.12 548.27,-28.96"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="549.41,-32.27 558.14,-26.27 547.57,-25.52 549.41,-32.27"/>
</g>
<!-- 14 -->
<g id="node15" class="node">
<title>14</title>
<path fill="none" stroke="#56b9d8" stroke-width="2" stroke-dasharray="5,2" d="M468.78,-252C468.78,-252 403.78,-252 403.78,-252 397.78,-252 391.78,-246 391.78,-240 391.78,-240 391.78,-228 391.78,-228 391.78,-222 397.78,-216 403.78,-216 403.78,-216 468.78,-216 468.78,-216 474.78,-216 480.78,-222 480.78,-228 480.78,-228 480.78,-240 480.78,-240 480.78,-246 474.78,-252 468.78,-252"/>
<text text-anchor="middle" x="436.28" y="-231.5" font-family="sans" font-size="10.00">picard_SeqDict</text>
</g>
<!-- 14&#45;&gt;13 -->
<g id="edge21" class="edge">
<title>14&#45;&gt;13</title>
<path fill="none" stroke="grey" stroke-width="2" d="M391.61,-221.83C349.12,-211.21 284.34,-195.01 233.49,-182.3"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="234.07,-178.84 223.52,-179.81 232.37,-185.63 234.07,-178.84"/>
</g>
<!-- 14&#45;&gt;15 -->
<g id="edge24" class="edge">
<title>14&#45;&gt;15</title>
<path fill="none" stroke="grey" stroke-width="2" d="M481.1,-224.04C496.62,-221.16 514.18,-218.16 530.28,-216 710.7,-191.78 757.51,-201.43 938.28,-180 950.16,-178.59 962.7,-176.91 974.96,-175.17"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="975.76,-178.59 985.16,-173.69 974.76,-171.66 975.76,-178.59"/>
</g>
<!-- 14&#45;&gt;18 -->
<g id="edge33" class="edge">
<title>14&#45;&gt;18</title>
<path fill="none" stroke="grey" stroke-width="2" d="M429.86,-215.7C426.93,-207.81 423.4,-198.3 420.14,-189.55"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="423.4,-188.26 416.64,-180.1 416.84,-190.7 423.4,-188.26"/>
</g>
<!-- 14&#45;&gt;19 -->
<g id="edge36" class="edge">
<title>14&#45;&gt;19</title>
<path fill="none" stroke="grey" stroke-width="2" d="M399.34,-215.88C378.79,-206.35 353.03,-194.41 331.19,-184.28"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="332.65,-181.1 322.1,-180.07 329.7,-187.45 332.65,-181.1"/>
</g>
<!-- 14&#45;&gt;22 -->
<g id="edge45" class="edge">
<title>14&#45;&gt;22</title>
<path fill="none" stroke="grey" stroke-width="2" d="M481.05,-220C516.96,-209.57 567.98,-194.75 608.99,-182.84"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="610.02,-186.18 618.64,-180.03 608.07,-179.46 610.02,-186.18"/>
</g>
<!-- 14&#45;&gt;23 -->
<g id="edge48" class="edge">
<title>14&#45;&gt;23</title>
<path fill="none" stroke="grey" stroke-width="2" d="M481.2,-224.72C496.74,-221.9 514.27,-218.76 530.28,-216 624.78,-199.73 652.27,-203.21 748.85,-180.17"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="749.83,-183.53 758.73,-177.78 748.19,-176.73 749.83,-183.53"/>
</g>
<!-- 15&#45;&gt;0 -->
<g id="edge5" class="edge">
<title>15&#45;&gt;0</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1042.12,-143.95C1028.72,-123.16 1003.08,-88.74 971.28,-72 911.08,-40.32 707.18,-25.7 622.56,-20.89"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="622.56,-17.39 612.38,-20.33 622.17,-24.38 622.56,-17.39"/>
</g>
<!-- 16 -->
<g id="node17" class="node">
<title>16</title>
<path fill="none" stroke="#d6d856" stroke-width="2" stroke-dasharray="5,2" d="M495.78,-108C495.78,-108 422.78,-108 422.78,-108 416.78,-108 410.78,-102 410.78,-96 410.78,-96 410.78,-84 410.78,-84 410.78,-78 416.78,-72 422.78,-72 422.78,-72 495.78,-72 495.78,-72 501.78,-72 507.78,-78 507.78,-84 507.78,-84 507.78,-96 507.78,-96 507.78,-102 501.78,-108 495.78,-108"/>
<text text-anchor="middle" x="459.28" y="-87.5" font-family="sans" font-size="10.00">GATK_MergeVCF</text>
</g>
<!-- 16&#45;&gt;0 -->
<g id="edge6" class="edge">
<title>16&#45;&gt;0</title>
<path fill="none" stroke="grey" stroke-width="2" d="M490.11,-71.88C508.01,-61.93 530.66,-49.35 549.37,-38.95"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="551.16,-41.96 558.2,-34.05 547.76,-35.84 551.16,-41.96"/>
</g>
<!-- 17&#45;&gt;16 -->
<g id="edge26" class="edge">
<title>17&#45;&gt;16</title>
<path fill="none" stroke="grey" stroke-width="2" d="M508.22,-143.7C500.34,-135.22 490.73,-124.86 482.11,-115.58"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="484.54,-113.05 475.17,-108.1 479.41,-117.81 484.54,-113.05"/>
</g>
<!-- 18&#45;&gt;16 -->
<g id="edge27" class="edge">
<title>18&#45;&gt;16</title>
<path fill="none" stroke="grey" stroke-width="2" d="M422.4,-143.7C428.15,-135.47 435.15,-125.48 441.49,-116.42"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="444.44,-118.3 447.31,-108.1 438.71,-114.29 444.44,-118.3"/>
</g>
<!-- 19&#45;&gt;16 -->
<g id="edge28" class="edge">
<title>19&#45;&gt;16</title>
<path fill="none" stroke="grey" stroke-width="2" d="M327.85,-143.88C351.85,-134.22 382.01,-122.09 407.39,-111.88"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="408.89,-115.05 416.86,-108.07 406.27,-108.55 408.89,-115.05"/>
</g>
<!-- 20 -->
<g id="node21" class="node">
<title>20</title>
<path fill="none" stroke="#d6d856" stroke-width="2" stroke-dasharray="5,2" d="M775.78,-108C775.78,-108 702.78,-108 702.78,-108 696.78,-108 690.78,-102 690.78,-96 690.78,-96 690.78,-84 690.78,-84 690.78,-78 696.78,-72 702.78,-72 702.78,-72 775.78,-72 775.78,-72 781.78,-72 787.78,-78 787.78,-84 787.78,-84 787.78,-96 787.78,-96 787.78,-102 781.78,-108 775.78,-108"/>
<text text-anchor="middle" x="739.28" y="-87.5" font-family="sans" font-size="10.00">GATK_MergeVCF</text>
</g>
<!-- 20&#45;&gt;0 -->
<g id="edge7" class="edge">
<title>20&#45;&gt;0</title>
<path fill="none" stroke="grey" stroke-width="2" d="M701.61,-71.88C677.24,-60.8 645.69,-46.46 621.59,-35.5"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="622.98,-32.29 612.43,-31.34 620.08,-38.66 622.98,-32.29"/>
</g>
<!-- 21&#45;&gt;20 -->
<g id="edge38" class="edge">
<title>21&#45;&gt;20</title>
<path fill="none" stroke="grey" stroke-width="2" d="M863.75,-146.5C841.53,-136.59 811.73,-123.3 786.85,-112.21"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="788.14,-108.95 777.58,-108.08 785.29,-115.35 788.14,-108.95"/>
</g>
<!-- 22&#45;&gt;20 -->
<g id="edge39" class="edge">
<title>22&#45;&gt;20</title>
<path fill="none" stroke="grey" stroke-width="2" d="M692.61,-143.7C700.04,-135.3 709.11,-125.07 717.26,-115.86"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="720.12,-117.91 724.13,-108.1 714.88,-113.27 720.12,-117.91"/>
</g>
<!-- 23&#45;&gt;20 -->
<g id="edge40" class="edge">
<title>23&#45;&gt;20</title>
<path fill="none" stroke="grey" stroke-width="2" d="M786.71,-143.7C779.08,-135.22 769.76,-124.86 761.41,-115.58"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="763.97,-113.2 754.68,-108.1 758.77,-117.88 763.97,-113.2"/>
</g>
<!-- 24&#45;&gt;0 -->
<g id="edge8" class="edge">
<title>24&#45;&gt;0</title>
<path fill="none" stroke="grey" stroke-width="2" d="M71.65,-147.66C74.55,-146.38 77.46,-145.13 80.28,-144 174.2,-106.33 198.28,-97.19 296.28,-72 385.4,-49.1 492.41,-32.16 547.85,-24.15"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="548.51,-27.59 557.91,-22.71 547.52,-20.66 548.51,-27.59"/>
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<!-- 25&#45;&gt;0 -->
<g id="edge9" class="edge">
<title>25&#45;&gt;0</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1140.76,-143.85C1111.04,-123.13 1057.55,-88.94 1006.28,-72 870.28,-27.06 698.01,-19.81 623.02,-18.92"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="622.7,-15.42 612.68,-18.84 622.64,-22.42 622.7,-15.42"/>
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</g>
</svg>