From a4bdc67a11b2099b79e167d9bc0de215c4b4c9cd Mon Sep 17 00:00:00 2001 From: Martin Larralde Date: Tue, 16 Jun 2020 12:59:22 +0200 Subject: [PATCH] Release v0.2.0 --- CHANGELOG.md | 11 +++++++++-- README.md | 2 +- orthoani/_version.txt | 2 +- 3 files changed, 11 insertions(+), 4 deletions(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index c552d4a..c1526b6 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -5,7 +5,15 @@ The format is based on [Keep a Changelog](http://keepachangelog.com/en/1.0.0/) and this project adheres to [Semantic Versioning](http://semver.org/spec/v2.0.0.html). ## [Unreleased] -[Unreleased]: https://github.com/althonos/orthoani/compare/v0.1.0-post1...HEAD +[Unreleased]: https://github.com/althonos/orthoani/compare/v0.2.0...HEAD + +## [v0.2.0] - 2020-06-16 +[v0.2.0]: https://github.com/althonos/orthoani/compare/v0.1.0-post1...v0.2.0 +### Added +- `threads` argument controlling BLASTn thread count to `orthoani` and `orthoani_pairwise`. +- `-j` / `--jobs` flag controlling BLASTn thread count to CLI. +- Proper documentation and error codes to CLI. +- `orthoani` console script to call the CLI without `python -m` invocation. ## [v0.1.0-post1] - 2020-06-15 [v0.1.0-post1]: https://github.com/althonos/orthoani/compare/v0.1.0...v0.1.0-post1 @@ -16,5 +24,4 @@ and this project adheres to [Semantic Versioning](http://semver.org/spec/v2.0.0. ## [v0.1.0] - 2020-06-15 [v0.1.0]: https://github.com/althonos/orthoani/compare/21725fe...v0.1.9 - Initial release. diff --git a/README.md b/README.md index 4d14d21..ffb90bc 100644 --- a/README.md +++ b/README.md @@ -57,7 +57,7 @@ ani = orthoani.orthoani(genome_1, genome_2) `orthoani` can also be used from the CLI using a very simple command-line interface: ```console -$ python -m orthoani -q sequence1.fa -r sequence2.fa +$ orthoani -q sequence1.fa -r sequence2.fa 0.5725 ``` diff --git a/orthoani/_version.txt b/orthoani/_version.txt index fec9f0c..0ea3a94 100644 --- a/orthoani/_version.txt +++ b/orthoani/_version.txt @@ -1 +1 @@ -0.1.0-post1 +0.2.0