diff --git a/examples/healthcare/models/diabetic_retinopthy_net.py b/examples/healthcare/models/diabetic_retinopthy_net.py new file mode 100644 index 000000000..856adb7e7 --- /dev/null +++ b/examples/healthcare/models/diabetic_retinopthy_net.py @@ -0,0 +1,94 @@ +# +# Licensed to the Apache Software Foundation (ASF) under one +# or more contributor license agreements. See the NOTICE file +# distributed with this work for additional information +# regarding copyright ownership. The ASF licenses this file +# to you under the Apache License, Version 2.0 (the +# "License"); you may not use this file except in compliance +# with the License. You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. +# + +from singa import layer +from singa import model + + +class CNN(model.Model): + + def __init__(self, num_classes=10, num_channels=1): + super(CNN, self).__init__() + self.num_classes = num_classes + self.input_size = 128 + self.dimension = 4 + self.conv1 = layer.Conv2d(num_channels, 32, 3, padding=0, activation="RELU") + self.conv2 = layer.Conv2d(32, 64, 3, padding=0, activation="RELU") + self.conv3 = layer.Conv2d(64, 64, 3, padding=0, activation="RELU") + self.linear1 = layer.Linear(128) + self.linear2 = layer.Linear(num_classes) + self.pooling1 = layer.MaxPool2d(2, 2, padding=0) + self.pooling2 = layer.MaxPool2d(2, 2, padding=0) + self.pooling3 = layer.MaxPool2d(2, 2, padding=0) + self.relu = layer.ReLU() + self.flatten = layer.Flatten() + self.softmax_cross_entropy = layer.SoftMaxCrossEntropy() + self.sigmoid = layer + + def forward(self, x): + y = self.conv1(x) + y = self.pooling1(y) + y = self.conv2(y) + y = self.pooling2(y) + y = self.conv3(y) + y = self.pooling3(y) + y = self.flatten(y) + y = self.linear1(y) + y = self.relu(y) + y = self.linear2(y) + return y + + def train_one_batch(self, x, y, dist_option, spars): + out = self.forward(x) + loss = self.softmax_cross_entropy(out, y) + + if dist_option == 'plain': + self.optimizer(loss) + elif dist_option == 'half': + self.optimizer.backward_and_update_half(loss) + elif dist_option == 'partialUpdate': + self.optimizer.backward_and_partial_update(loss) + elif dist_option == 'sparseTopK': + self.optimizer.backward_and_sparse_update(loss, + topK=True, + spars=spars) + elif dist_option == 'sparseThreshold': + self.optimizer.backward_and_sparse_update(loss, + topK=False, + spars=spars) + return out, loss + + def set_optimizer(self, optimizer): + self.optimizer = optimizer + + +def create_model(**kwargs): + """Constructs a CNN model. + + Args: + pretrained (bool): If True, returns a pre-trained model. + + Returns: + The created CNN model. + """ + model = CNN(**kwargs) + + return model + + +__all__ = ['CNN', 'create_model']