diff --git a/app/config.py b/app/config.py index 8644e1c..d92f80e 100644 --- a/app/config.py +++ b/app/config.py @@ -8,25 +8,28 @@ from typing import Annotated, Optional, Union from pydantic import ( - BaseSettings, + AliasChoices, DirectoryPath, Field, FilePath, HttpUrl, PostgresDsn, - parse_obj_as, - validator, + TypeAdapter, + field_validator, ) +from pydantic_settings import BaseSettings, SettingsConfigDict from .util import normalize_postgres_dsn_for_atoti_sql class Config(BaseSettings): - """Hold all the configuration properties of the app, not only the ones related to atoti. + """Hold all the configuration properties of the app, not only the ones related to Atoti. See https://pydantic-docs.helpmanual.io/usage/settings/. """ + model_config = SettingsConfigDict(frozen=True) + data_refresh_period: Optional[timedelta] = timedelta(minutes=1) # The $PORT environment variable is used by most PaaS to indicate the port the app server should bind to. @@ -34,32 +37,30 @@ class Config(BaseSettings): requests_timeout: timedelta = timedelta(seconds=30) - reverse_geocoding_path: Union[HttpUrl, FilePath] = parse_obj_as( - HttpUrl, "https://api-adresse.data.gouv.fr/reverse/csv/" - ) + reverse_geocoding_path: Union[HttpUrl, FilePath] = TypeAdapter( + HttpUrl + ).validate_python("https://api-adresse.data.gouv.fr/reverse/csv/") user_content_storage: Annotated[ Optional[Union[PostgresDsn, Path]], Field( # $DATABASE_URL is used by some PaaS such to designate the URL of the app's primary database. # For instance: https://devcenter.heroku.com/articles/heroku-postgresql#designating-a-primary-database. - env="database_url", + validation_alias=AliasChoices("user_content_storage", "database_url") ), ] = Path("content") - velib_data_base_path: Union[HttpUrl, DirectoryPath] = parse_obj_as( - HttpUrl, - "https://velib-metropole-opendata.smoove.pro/opendata/Velib_Metropole", + velib_data_base_path: Union[HttpUrl, DirectoryPath] = TypeAdapter( + HttpUrl + ).validate_python( + "https://velib-metropole-opendata.smoove.pro/opendata/Velib_Metropole" ) - @validator("user_content_storage") + @field_validator("user_content_storage") @classmethod - def normalize_postgresql_dsn(cls, value: PostgresDsn | object) -> object: - return ( - normalize_postgres_dsn_for_atoti_sql(value) - if isinstance(value, PostgresDsn) - else value - ) - - class Config: - allow_mutation = False + def normalize_postgres_dsn(cls, value: object) -> object: + try: + postgres_dsn: PostgresDsn = TypeAdapter(PostgresDsn).validate_python(value) + return normalize_postgres_dsn_for_atoti_sql(postgres_dsn) + except ValueError: + return value diff --git a/app/start_session.py b/app/start_session.py index efbc543..f469f0d 100644 --- a/app/start_session.py +++ b/app/start_session.py @@ -1,9 +1,9 @@ from __future__ import annotations import sys +from pathlib import Path import atoti as tt -from pydantic import AnyUrl from .config import Config from .create_and_join_tables import create_and_join_tables @@ -12,15 +12,19 @@ def create_session(*, config: Config) -> tt.Session: + user_content_storage: Path | tt.UserContentStorageConfig | None = None + + if config.user_content_storage is not None: + user_content_storage = ( + config.user_content_storage + if isinstance(config.user_content_storage, Path) + else tt.UserContentStorageConfig(url=str(config.user_content_storage)) + ) + return tt.Session( logging=tt.LoggingConfig(destination=sys.stdout), port=config.port, - user_content_storage=config.user_content_storage - and ( - tt.UserContentStorageConfig(url=str(config.user_content_storage)) - if isinstance(config.user_content_storage, AnyUrl) - else config.user_content_storage - ), + user_content_storage=user_content_storage, ) diff --git a/app/util/normalize_postgres_dsn_for_atoti_sql.py b/app/util/normalize_postgres_dsn_for_atoti_sql.py index 8368153..1e60043 100644 --- a/app/util/normalize_postgres_dsn_for_atoti_sql.py +++ b/app/util/normalize_postgres_dsn_for_atoti_sql.py @@ -2,11 +2,13 @@ from urllib.parse import urlencode, urlparse -from pydantic import PostgresDsn +from pydantic import PostgresDsn, TypeAdapter -def normalize_postgres_dsn_for_atoti_sql(url: PostgresDsn, /) -> object: - parts = urlparse(url) +def normalize_postgres_dsn_for_atoti_sql(url: PostgresDsn, /) -> PostgresDsn: + parts = urlparse(str(url)) + + parts = parts._replace(scheme="postgresql") query_parts: list[str] = [] @@ -17,14 +19,11 @@ def normalize_postgres_dsn_for_atoti_sql(url: PostgresDsn, /) -> object: query_parts.append( urlencode({"user": parts.username, "password": parts.password}) ) + # Remove username and password. + parts = parts._replace(netloc=parts.netloc.split("@", maxsplit=1).pop()) + + if query_parts: + parts = parts._replace(query="&".join(query_parts)) - return PostgresDsn( - # This is how Pydantic creates an instance from parts. - None, - scheme="postgresql", - host=str(parts.hostname), - port=str(parts.port) if parts.port else None, - path=parts.path, - query="&".join(query_parts) if query_parts else None, - fragment=parts.fragment, - ) + new_url = parts.geturl() + return TypeAdapter(PostgresDsn).validate_python(new_url) diff --git a/app/util/read_json.py b/app/util/read_json.py index 03dbc39..4cff2dd 100644 --- a/app/util/read_json.py +++ b/app/util/read_json.py @@ -11,10 +11,10 @@ def read_json( base_path: HttpUrl | Path, file_path: Path, /, *, timeout: timedelta ) -> object: - if isinstance(base_path, HttpUrl): - url = f"{base_path}/{file_path.as_posix()}" - response = requests.get(url, timeout=timeout.total_seconds()) - response.raise_for_status() - return response.json() + if isinstance(base_path, Path): + return json.loads((base_path / file_path).read_bytes()) - return json.loads((base_path / file_path).read_bytes()) + url = f"{base_path}/{file_path.as_posix()}" + response = requests.get(url, timeout=timeout.total_seconds()) + response.raise_for_status() + return response.json() diff --git a/app/util/reverse_geocode.py b/app/util/reverse_geocode.py index 59a72dc..7977f8a 100644 --- a/app/util/reverse_geocode.py +++ b/app/util/reverse_geocode.py @@ -72,7 +72,7 @@ def _reverse_geocode( coordinates_df.to_csv(file, index=False) file.seek(0) response = requests.post( - reverse_geocoding_path, + str(reverse_geocoding_path), data=[ ("result_columns", column_name) for column_name in _COLUMN_NAME_MAPPING ], diff --git a/poetry.lock b/poetry.lock index 32f8292..845c822 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,19 +1,30 @@ # This file is automatically @generated by Poetry 1.5.1 and should not be changed by hand. +[[package]] +name = "annotated-types" +version = "0.5.0" +description = "Reusable constraint types to use with typing.Annotated" +optional = false +python-versions = ">=3.7" +files = [ + {file = "annotated_types-0.5.0-py3-none-any.whl", hash = "sha256:58da39888f92c276ad970249761ebea80ba544b77acddaa1a4d6cf78287d45fd"}, + {file = "annotated_types-0.5.0.tar.gz", hash = "sha256:47cdc3490d9ac1506ce92c7aaa76c579dc3509ff11e098fc867e5130ab7be802"}, +] + [[package]] name = "atoti" -version = "0.8.1" +version = "0.8.2" description = "Design, explore and deploy efficient and flexible data models" optional = false python-versions = "*" files = [ - {file = "atoti-0.8.1-0_ad0cf24-py3-none-any.whl", hash = "sha256:2d837fac854ff5273bab78ba5ac3ea16f10fdcd0cb10ac4db1eb74b6006b76e2"}, + {file = "atoti-0.8.2-0_80138c9-py3-none-any.whl", hash = "sha256:ff894d84b1112c9f69070f213295dcea036621707cb6724a26a634a952915b2c"}, ] [package.dependencies] -atoti-core = "0.8.1" -atoti-query = "0.8.1" -atoti-sql = {version = "0.8.1", optional = true, markers = "extra == \"sql\""} +atoti-core = "0.8.2" +atoti-query = "0.8.2" +atoti-sql = {version = "0.8.2", optional = true, markers = "extra == \"sql\""} jdk4py = ">=17.0.3.0,<18" numpy = "*" pandas = "*" @@ -24,28 +35,29 @@ typeguard = "*" typing-extensions = "*" [package.extras] -aws = ["atoti-aws (==0.8.1)"] -azure = ["atoti-azure (==0.8.1)"] +aws = ["atoti-aws (==0.8.2)"] +azure = ["atoti-azure (==0.8.2)"] dev = ["pyjwt[crypto]", "pyspark", "pytest", "pytz", "requests", "scipy", "test-utils"] -directquery-bigquery = ["atoti-directquery-bigquery (==0.8.1)"] -directquery-clickhouse = ["atoti-directquery-clickhouse (==0.8.1)"] -directquery-mssql = ["atoti-directquery-mssql (==0.8.1)"] -directquery-redshift = ["atoti-directquery-redshift (==0.8.1)"] -directquery-snowflake = ["atoti-directquery-snowflake (==0.8.1)"] -directquery-synapse = ["atoti-directquery-synapse (==0.8.1)"] -gcp = ["atoti-gcp (==0.8.1)"] +directquery-bigquery = ["atoti-directquery-bigquery (==0.8.2)"] +directquery-clickhouse = ["atoti-directquery-clickhouse (==0.8.2)"] +directquery-databricks = ["atoti-directquery-databricks (==0.8.2)"] +directquery-mssql = ["atoti-directquery-mssql (==0.8.2)"] +directquery-redshift = ["atoti-directquery-redshift (==0.8.2)"] +directquery-snowflake = ["atoti-directquery-snowflake (==0.8.2)"] +directquery-synapse = ["atoti-directquery-synapse (==0.8.2)"] +gcp = ["atoti-gcp (==0.8.2)"] jupyterlab3 = ["atoti-jupyterlab3 (>=0.8.0)"] -kafka = ["atoti-kafka (==0.8.1)"] -sql = ["atoti-sql (==0.8.1)"] +kafka = ["atoti-kafka (==0.8.2)"] +sql = ["atoti-sql (==0.8.2)"] [[package]] name = "atoti-core" -version = "0.8.1" +version = "0.8.2" description = "Package containing private symbols shared by the other Atoti packages" optional = false python-versions = ">=3.9" files = [ - 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diff --git a/tests/test_normalize_dsn_for_atoti_sql.py b/tests/test_normalize_dsn_for_atoti_sql.py new file mode 100644 index 0000000..5377a79 --- /dev/null +++ b/tests/test_normalize_dsn_for_atoti_sql.py @@ -0,0 +1,33 @@ +from __future__ import annotations + +import pytest +from pydantic import PostgresDsn, TypeAdapter + +from app.util import normalize_postgres_dsn_for_atoti_sql + + +@pytest.mark.parametrize( + ("value", "expected_output"), + [ + ( + "postgres://foo:bar@example.com", + "postgresql://example.com?user=foo&password=bar", + ), + ( + "postgres://foo:bar@example.com/db", + "postgresql://example.com/db?user=foo&password=bar", + ), + ( + "postgres://foo:bar@example.com:5432/db?test=baz", + "postgresql://example.com:5432/db?test=baz&user=foo&password=bar", + ), + ( + "postgres://foo:bar@example.com:5432/db?test1=baz&test2=foo#search", + "postgresql://example.com:5432/db?test1=baz&test2=foo&user=foo&password=bar#search", + ), + ], +) +def test_normalize_dsn_for_atoti_sql(value: str, expected_output: str) -> None: + validated_value: PostgresDsn = TypeAdapter(PostgresDsn).validate_python(value) + output = str(normalize_postgres_dsn_for_atoti_sql(validated_value)) + assert output == expected_output