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Error in processing Bismark cytosine reports #87

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MinS1 opened this issue Aug 21, 2024 · 1 comment
Closed

Error in processing Bismark cytosine reports #87

MinS1 opened this issue Aug 21, 2024 · 1 comment

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@MinS1
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MinS1 commented Aug 21, 2024

Hi, I got this error in the processBismark function while running DM.R:

expr: syntax error
Warning message:
replacing previous import 'Matrix::det' by 'SparseM::det' when loading 'sigFeature'
Error in bsseq::read.bismark(files = files, rmZeroCov = FALSE, strandCollapse = TRUE, :
'files' cannot have duplicate entries.
Calls: -> ->
Execution halted

However, I have already confirmed that my files are not duplicated. How can I resolve this issue? I would appreciate your help. Thank you!

Shi
@MinS1
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MinS1 commented Aug 21, 2024

@ben-laufer

@MinS1 MinS1 closed this as completed Sep 2, 2024
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