Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Add command to subset seqrepo #45

Open
holtgrewe opened this issue Dec 28, 2023 · 0 comments
Open

Add command to subset seqrepo #45

holtgrewe opened this issue Dec 28, 2023 · 0 comments
Labels
enhancement New feature or request

Comments

@holtgrewe
Copy link
Member

Is your feature request related to a problem? Please describe.
The whole seqrepo is of size 216GB.

Describe the solution you'd like
Implement a CLI tool that copies over the data for transcripts in cdot files (after #42) plus the one for the genomes into a fresh seqrepo.

Describe alternatives you've considered
N/A

Additional context
@holtgrewe holtgrewe added the enhancement New feature or request label Dec 28, 2023
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
enhancement New feature or request
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@holtgrewe