From 2203ddc7e7615eb5fff105483787e18cc834a326 Mon Sep 17 00:00:00 2001
From: Lucian Smith <lpsmith@uw.edu>
Date: Fri, 16 Feb 2024 15:19:05 -0800
Subject: [PATCH 1/2] Fix old test.

This test used to work because SED-ML contained instructions to fix a bad model.  Now, we try to load the model first before following the instructions, so loading a bad model is verbotten.  I don't think loading a bad model is actually important, so I just fixed the model.
---
 tests/fixtures/change_initial_assignment.omex | Bin 1818 -> 1827 bytes
 1 file changed, 0 insertions(+), 0 deletions(-)

diff --git a/tests/fixtures/change_initial_assignment.omex b/tests/fixtures/change_initial_assignment.omex
index ed8f5284578b0d34526e34997c393ff3f7720009..324c19442f7fa4dfcbbf673d9f5e6e953e88bbbb 100644
GIT binary patch
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From 485125df9c812a58a636360afcdd51141b5e67b5 Mon Sep 17 00:00:00 2001
From: Lucian Smith <lpsmith@uw.edu>
Date: Fri, 16 Feb 2024 15:19:53 -0800
Subject: [PATCH 2/2] Update requirements, workflow.

---
 .github/workflows/ci.yml | 4 ++--
 requirements.txt         | 6 +++---
 2 files changed, 5 insertions(+), 5 deletions(-)

diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
index f0df474..9d4a62b 100644
--- a/.github/workflows/ci.yml
+++ b/.github/workflows/ci.yml
@@ -83,10 +83,10 @@ jobs:
           restore-keys: |
             ${{ runner.os }}-pip-
 
-      - name: Install libXML2, libncurses5
+      - name: Install libXML2
         run: |
           sudo apt-get update -y
-          sudo apt-get install -y --no-install-recommends libxml2 libncurses5
+          sudo apt-get install -y --no-install-recommends libxml2
 
       - name: Install pip
         run: |
diff --git a/requirements.txt b/requirements.txt
index 8813121..965b78d 100644
--- a/requirements.txt
+++ b/requirements.txt
@@ -1,7 +1,7 @@
-biosimulators_utils[logging] >= 0.1.183
+biosimulators_utils[logging] >= 0.1.187
 kisao >= 2.33
-libroadrunner >= 2.4.0
+libroadrunner >= 2.5.0
 lxml
 numpy
 pandas
-tellurium >= 2.2.8
+tellurium >= 2.2.10