Methods in Genomics

How this works:

• inside the Topics folder are organized the topics we are going to touch, if you start with a new topic checkout the GSEA example (no need to do tutorial & presenation & bibliography, this is just an example).
• bellow are listed the main topics we would like to cover (suggestions welcome)
• in the issues section of this page are listed again the topics (each issue is a topic), grouped by fields (as labels). This issues section could be great to quickly see who knows what. If you know about a given topic please assign yourself to the corresponding issue.
  • Github trick: if you add files to the repo related to a given topic (e.g. GSEA), you can search for the issue number in "issues" and add this number to your commit message (commit -am "added presentation to GSEA related to #1"), this will automatically link your commit, and thus your changes, to the corresponding issue (more info)

that's it!

Schedule

dates	Speaker	Steward 1	Steward 2	Topic
2021-01-20	Francois Serra			Hi-C - TADbit
2021-02-03	Beatriz Urda	Alba Lepore	Kathleen Imbach	RNA-seq
2021-02-17	Jon Sánchez Valle	Mónica Cabrera	Núria Olvera	GSEA
2021-03-03	Carlos Madariaga	François Serra	Paula López	Chromatin loop callers
2021-03-17	Hira Shahid	Jon Sánchez Valle	Laureano Tomás	GWAS
2021-04-14	Kathleen Imbach	Jon Sánchez Valle	Victoria Isabel Ruiz Serra	ATAC-seq
2021-04-28	Laureano Tomás	Beatriz Urda	Hira Shahid	CUT & RUN
2021-05-12	María Morales Martínez	Núria Olvera	Victoria Isabel Ruiz Serra	DamID and LADs
2021-05-26	Mónica Cabrera	François Serra	Paula López	(Promoter) Capture Hi-C
2021-06-09	Núria Olvera	Jon Sánchez Valle	Beatriz Urda	DNA Methylation (example: Aging clock)
2021-07-07	Victoria Isabel Ruiz Serra	Hira Shahid	Kathleen Imbach	PDBmapper (example with COVID)

Note: feel free to edit and add (and reserve) the topic of your talk