README.md

SKOOTS

SKeletOn ObjecT Segmentation - 2D/3D instance segmentation of arbitrary biomedical images.

To install, make sure pyTorch 2.1 is installed with CUDA support.

pip install skoots

Documentation: skoots.readthedocs.io

BioRxiv: https://www.biorxiv.org/content/10.1101/2023.05.05.539611v1