diff --git a/src/fox_lab_to_nwb/conversion_notes.md b/src/fox_lab_to_nwb/conversion_notes.md new file mode 100644 index 0000000..36e8c73 --- /dev/null +++ b/src/fox_lab_to_nwb/conversion_notes.md @@ -0,0 +1,85 @@ + +# General comments +Point-person: Amy Streets (axs2909@case.edu) and Kris Lea (kxl786@case.edu) + +https://sites.google.com/site/cwrufoxlab/people + +# DeepLabCut output files +config files missing but Video and DLC output files are available + +# Static TIFF files for confocal imaging +Not yet available + +# Synchronization signal with Spike2 +Not yet available + +# Intracellular electrophysiology data including the voltage trace and stimulus trace + +Not yet available + +# Files on data shared + +### Tshx18D07_240124_115923_f3_r1.fly2 +This is supposed to be a struct with DAQ data and the wingbeat analysis. Can't open it with matlab online unless extension is changed to .mat + +Channel names: +- CamSync +- CamTrigger +- OptoTrigger +- LWingBeatAmp +- RWingBeatAmp +- WingBeatFreq +- LHutchen +- RHutchen +- PTrigger + + +## Cameras +### Fastec + +Files: +* TOPCAM_000000.avi +* SIDE_000000.avi + +Format is avi, metadata is in xml + +https://www.fastecimaging.com/ + +TopCam has a DLC analysis for the following body parts: + +bodyparts: L_ant, R_ant, L_base, R_base, + +Sidecam does not have DLC analysis + +### Phantom +Files: +* XZ_1_186.mp4 + +Format is mp4, metadata is in xml + +This camera has an associated DLC analysis for the following body parts: + +bodyparts: haltere + +### Photron + +Files: +* Tshx18D07_240124_115923_f3_r1_down20.mp4 [This seems to be the same as topcam] + + +Not sure about this. The `.mii` metadata is not available and there is this extra file: + + +It also does not have a corresponding DLC analysis + + +## `Tshx18D07_f3_r1_trial.Tsh` +This should be trial data. +Unable to read in matlab online unless extension is changed to .mat + +## Tshx18D07_240124_115923_f3_r1_down20_PROC.mat +This has the analysis for the wingbeat redone. + + +## Tshx18D07_ant_top_f3_r1_500ms_dvProject.mat +Not described \ No newline at end of file