diff --git a/README.md b/README.md index 6116b3e..fbc81bf 100644 --- a/README.md +++ b/README.md @@ -33,11 +33,9 @@ classDiagram <> -------------------------------------- - links + datasets -------------------------------------- - microscope : Microscope - light_source : LightSource - optical_channel : MicroscopyOpticalChannel + microscopy_table_region : DynamicTableRegion } class PlanarMicroscopySeries { @@ -133,45 +131,34 @@ classDiagram reference_frame : text, optional } - class MicroscopyOpticalChannel{ - <> + class MicroscopyTable{ + <> -------------------------------------- datasets -------------------------------------- - description : text - - -------------------------------------- - attributes - -------------------------------------- - indicator : text - filter_description : text, optional - emission_wavelength_in_nm : numeric, optional - } - - class LightSource{ - <> - - -------------------------------------- - attributes - -------------------------------------- - model : text, optional - filter_description : text, optional - excitation_wavelength_in_nm : numeric, optional - peak_power_in_W : numeric, optional - peak_pulse_energy_in_J : numeric, optional - intensity_in_W_per_m2 : numeric, optional - exposure_time_in_s : numeric, optional - pulse_rate_in_Hz : numeric, optional + VectorData : + - location : text, optional + - coordinates : numeric, length 2, optional + --> unit : text, default="micrometers" + - indicator : Indicator + - notes : text, optional + - microscope : Microscope + - excitation_source : ExcitationSource + - photodetector : Photodetector + - dichroic_mirror : DichroicMirror + - emission_filter : OpticalFilter + - excitation_filter : OpticalFilter + - objective_lens : ObjectiveLens } - class Microscope{ - <> + class Microscopy{ + <> -------------------------------------- - attributes + groups -------------------------------------- - model : text, optional + microscopy_table : MicroscopyTable } PlanarMicroscopySeries *-- MicroscopySeries : extends @@ -182,9 +169,8 @@ classDiagram VolumetricMicroscopySeries -- VolumetricImagingSpace : links PlanarImagingSpace *-- ImagingSpace : extends VolumetricImagingSpace *-- ImagingSpace : extends - MicroscopySeries ..> Microscope : links - MicroscopySeries ..> LightSource : links - MicroscopySeries ..> MicroscopyOpticalChannel : links + MicroscopySeries ..> MicroscopyTable : reference rows + Microscopy ..> MicroscopyTable : links ``` ---