New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Non-coding variant effect prediction: DeepCT #197

Open

Madelinehazel opened this issue Feb 5, 2024 · 0 comments

Contributor

Madelinehazel commented Feb 5, 2024 •

edited

Loading

See if you can get DeepCT working to annotate a VCF with score, then benchmark using non-coding variant test set. Helper pipeline: https://github.com/AIRI-Institute/DeepCT-inference-helper

suzanahmad assigned suzanahmad and unassigned suzanahmad

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment