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segmentation_networks

This repository contains model zoos for 3D segmentation. It's basically a re-implementation of NiftyNet.

NiftyNet

https://niftynet.io/

VNet

Milletari, F., Navab, N. and Ahmadi, S.A., 2016, October. V-net: Fully convolutional neural networks for volumetric medical image segmentation. In 2016 Fourth International Conference on 3D Vision (3DV) (pp. 565-571). IEEE.

VNet-VAE

Myronenko, A., 2018, September. 3D MRI brain tumor segmentation using autoencoder regularization. In International MICCAI Brainlesion Workshop (pp. 311-320). Springer, Cham.

Notes

I did not use subclass since the structure is hard coded. I wanted to change the network based on configuration files.

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This repository contains model zoos for 3D segmentation.

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