From 077475a755bc694347208fb752b20df4822cae55 Mon Sep 17 00:00:00 2001
From: tomvanmele <tom.v.mele@gmail.com>
Date: Sat, 16 Dec 2023 12:40:25 +0100
Subject: [PATCH] updated install instructions and new theme

---
 README.md                                  |  17 +-
 docs/_static/compas.css                    |  30 ---
 docs/_static/compas.ico                    | Bin 5148 -> 0 bytes
 docs/_static/compas_icon.png               | Bin 2780 -> 0 bytes
 docs/_static/compas_icon_white.png         | Bin 5093 -> 0 bytes
 docs/_static/compas_white.ico              | Bin 4856 -> 0 bytes
 docs/_templates/compas-sidebar-footer.html |   5 -
 docs/_templates/navbar-nav.html            |  11 -
 docs/_templates/sbt-sidebar-nav.html       |  24 --
 docs/conf.py                               | 276 +++++----------------
 docs/installation.rst                      |  18 +-
 recipe/sha256.py                           |   2 +-
 requirements-dev.txt                       |  16 +-
 13 files changed, 83 insertions(+), 316 deletions(-)
 delete mode 100644 docs/_static/compas.css
 delete mode 100644 docs/_static/compas.ico
 delete mode 100644 docs/_static/compas_icon.png
 delete mode 100644 docs/_static/compas_icon_white.png
 delete mode 100644 docs/_static/compas_white.ico
 delete mode 100644 docs/_templates/compas-sidebar-footer.html
 delete mode 100644 docs/_templates/navbar-nav.html
 delete mode 100644 docs/_templates/sbt-sidebar-nav.html

diff --git a/README.md b/README.md
index 2c522d3..1d37cef 100644
--- a/README.md
+++ b/README.md
@@ -5,10 +5,20 @@ Many of the functions provided by `compas_libigl` are based on the examples in t
 
 ## Installation
 
-`compas_libigl` can be installed using a combination of conda and pip.
+### Stable
+
+The stable version of `compas_libigl` can now be installed from conda-forge.
 
 ```bash
-conda create -n igl python=3.7 git cmake">=3.14" boost eigen=3.3 COMPAS compas_view2 --yes
+conda create -n igl compas_libigl
+```
+
+### Dev install
+
+A dev version of `compas_libigl` can be installed using a combination of conda and pip.
+
+```bash
+conda create -n igl-dev python=3.9 git cmake">=3.14" boost eigen=3.3 pybind11 --yes
 conda activate igl
 git clone --recursive https://github.com/BlockResearchGroup/compas_libigl.git
 cd compas_libigl
@@ -16,9 +26,6 @@ rm -rf build
 pip install -e .
 ```
 
-> If you have git/cmake installed, this can be omitted from the environment installation.
-> On Mac, don't forget to install `python.app`!
-
 ## Libigl functions
 
 Currently the following functionalities of Libigl are included in the wrapper
diff --git a/docs/_static/compas.css b/docs/_static/compas.css
deleted file mode 100644
index b5bb915..0000000
--- a/docs/_static/compas.css
+++ /dev/null
@@ -1,30 +0,0 @@
-html[data-theme="light"] {
-    --pst-color-primary: #0092d2;
-    --pst-color-info: #0092d2;
-    --pst-color-text-muted: #888;
-}
-
-body {
-    line-height: 1.75;
-    font-weight: 300;
-}
-
-.bd-article-container h1 {
-    color: #0092d2;
-}
-
-.navbar-brand .logo__image {
-    height: 36px !important;
-}
-
-.bd-header {
-    box-shadow: none;
-    border-bottom: 1px solid var(--pst-color-shadow);
-}
-
-#rtd-footer-container {
-    height: 0px;
-    bottom: 0 !important;
-    margin: 0 !important;
-    display: none;
-}
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diff --git a/docs/_templates/compas-sidebar-footer.html b/docs/_templates/compas-sidebar-footer.html
deleted file mode 100644
index af7e762..0000000
--- a/docs/_templates/compas-sidebar-footer.html
+++ /dev/null
@@ -1,5 +0,0 @@
-<div class="sidebar-primary-item">
-    <a href="https://compas.dev" target="_blank">
-        COMPAS.dev <i class="fa fa-external-link" aria-hidden="true"></i>
-    </a>
-</div>
\ No newline at end of file
diff --git a/docs/_templates/navbar-nav.html b/docs/_templates/navbar-nav.html
deleted file mode 100644
index c5d0efa..0000000
--- a/docs/_templates/navbar-nav.html
+++ /dev/null
@@ -1,11 +0,0 @@
-<nav class="navbar-nav">
-  <!-- <p class="sidebar-header-items__title"
-     role="heading"
-     aria-level="1"
-     aria-label="{{ _('Site Navigation') }}">
-    {{ _("Site Navigation") }}
-  </p>
-  <ul class="bd-navbar-elements navbar-nav">
-    {{ generate_header_nav_html(n_links_before_dropdown=theme_header_links_before_dropdown) }}
-  </ul> -->
-</nav>
diff --git a/docs/_templates/sbt-sidebar-nav.html b/docs/_templates/sbt-sidebar-nav.html
deleted file mode 100644
index 8f41a32..0000000
--- a/docs/_templates/sbt-sidebar-nav.html
+++ /dev/null
@@ -1,24 +0,0 @@
-<nav class="bd-links" id="bd-docs-nav" aria-label="Main">
-    <div class="bd-toc-item navbar-nav active">
-        {% if theme_home_page_in_toc == True %}
-        {#- This mimicks the pydata theme list style so we can append an extra item at the top #}
-        <ul class="nav bd-sidenav bd-sidenav__home-link">
-            <li class="toctree-l1{% if pagename == root_doc %} current active{% endif %}">
-                <a class="reference internal" href="{{ pathto(root_doc) }}">
-                    {{ root_title }}
-                </a>
-            </li>
-        </ul>
-        {% endif -%}
-
-        {# Ref: https://github.com/pydata/pydata-sphinx-theme/blob/ebf7f704879a1cdc6016d6111062103353ac7677/src/pydata_sphinx_theme/__init__.py#L302 #}
-        {{- generate_toctree_html(
-            startdepth=0,
-            kind="sidebar",
-            maxdepth=theme_navigation_depth,
-            collapse=False,
-            includehidden=True,
-            titles_only=True,
-            show_nav_level=1) }}
-    </div>
-</nav>
diff --git a/docs/conf.py b/docs/conf.py
index 8812036..b3f4c73 100644
--- a/docs/conf.py
+++ b/docs/conf.py
@@ -1,40 +1,26 @@
 # flake8: noqa
 # -*- coding: utf-8 -*-
 
-# If your documentation needs a minimal Sphinx version, state it here.
-#
-# needs_sphinx = "1.0"
-
-import inspect
-import importlib
-import re
-import sphinx_compas_theme  # this is a temp solution
+from sphinx.writers import html, html5
+import sphinx_compas2_theme
 
 # -- General configuration ------------------------------------------------
 
 project = "COMPAS Libigl"
 copyright = "COMPAS Association"
 author = "Tom Van Mele"
-package = "compas_libigl"
 organization = "compas-dev"
+package = "compas_libigl"
 
+master_doc = "index"
+source_suffix = {".rst": "restructuredtext", ".md": "markdown"}
+templates_path = sphinx_compas2_theme.get_autosummary_templates_path()
+exclude_patterns = sphinx_compas2_theme.default_exclude_patterns
+add_module_names = False
+language = "en"
 
-def get_latest_version():
-    with open("../CHANGELOG.md", "r") as file:
-        content = file.read()
-        pattern = re.compile(r"## (Unreleased|\[\d+\.\d+\.\d+\])")
-        versions = pattern.findall(content)
-        latest_version = versions[0] if versions else None
-        if (
-            latest_version
-            and latest_version.startswith("[")
-            and latest_version.endswith("]")
-        ):
-            latest_version = latest_version[1:-1]
-        return latest_version
-
+latest_version = sphinx_compas2_theme.get_latest_version()
 
-latest_version = get_latest_version()
 if latest_version == "Unreleased":
     release = "Unreleased"
     version = "latest"
@@ -42,99 +28,39 @@ def get_latest_version():
     release = latest_version
     version = ".".join(release.split(".")[0:2])  # type: ignore
 
-master_doc = "index"
-source_suffix = {
-    ".rst": "restructuredtext",
-    ".md": "markdown",
-}
-templates_path = sphinx_compas_theme.get_autosummary_templates_path() + ["_templates"]
-exclude_patterns = ["_build", "**.ipynb_checkpoints", "_notebooks", "**/__temp"]
-
-add_module_names = True
-language = "en"
-
-
 # -- Extension configuration ------------------------------------------------
 
-extensions = [
-    "sphinx.ext.autodoc",
-    "sphinx.ext.autosummary",
-    "sphinx.ext.doctest",
-    "sphinx.ext.intersphinx",
-    "sphinx.ext.mathjax",
-    "sphinx.ext.extlinks",
-    "sphinx.ext.githubpages",
-    "sphinx.ext.coverage",
-    "sphinx.ext.autodoc.typehints",
-    "sphinx_design",
-    "sphinx_inline_tabs",
-    "sphinx_togglebutton",
-    "sphinx_remove_toctrees",
-    "sphinx_copybutton",
-    "numpydoc",
-]
+extensions = sphinx_compas2_theme.default_extensions
+
+# numpydoc options
 
 numpydoc_show_class_members = False
 numpydoc_class_members_toctree = False
 numpydoc_attributes_as_param_list = True
 
+# bibtex options
+
 # autodoc options
 
 autodoc_type_aliases = {}
-
-# this does not work properly yet
-# autodoc_typehints = "none"
-# autodoc_typehints_format = "short"
 autodoc_typehints_description_target = "documented"
-
-autodoc_mock_imports = [
-    "System",
-    "clr",
-    "Eto",
-    "Rhino",
-    "Grasshopper",
-    "scriptcontext",
-    "rhinoscriptsyntax",
-    "bpy",
-    "bmesh",
-    "mathutils",
-]
-
+autodoc_mock_imports = sphinx_compas2_theme.default_mock_imports
 autodoc_default_options = {
     "undoc-members": True,
     "show-inheritance": True,
 }
-
 autodoc_member_order = "groupwise"
-
 autoclass_content = "class"
 
 
-def skip(app, what, name, obj, would_skip, options):
-    if name.startswith("_"):
-        return True
-    return would_skip
-
-
 def setup(app):
-    app.connect("autodoc-skip-member", skip)
+    app.connect("autodoc-skip-member", sphinx_compas2_theme.skip)
 
 
 # autosummary options
 
 autosummary_generate = True
-autosummary_mock_imports = [
-    "System",
-    "clr",
-    "Eto",
-    "Rhino",
-    "Grasshopper",
-    "scriptcontext",
-    "rhinoscriptsyntax",
-    "bpy",
-    "bmesh",
-    "mathutils",
-]
+autosummary_mock_imports = sphinx_compas2_theme.default_mock_imports
 
 # graph options
 
@@ -154,148 +80,59 @@ def setup(app):
 
 # linkcode
 
-
-def linkcode_resolve(domain, info):
-    if domain != "py":
-        return None
-    if not info["module"]:
-        return None
-    if not info["fullname"]:
-        return None
-
-    package = info["module"].split(".")[0]
-    if not package.startswith(package):
-        return None
-
-    module = importlib.import_module(info["module"])
-    parts = info["fullname"].split(".")
-
-    if len(parts) == 1:
-        obj = getattr(module, info["fullname"])
-        mod = inspect.getmodule(obj)
-        if not mod:
-            return None
-        filename = mod.__name__.replace(".", "/")
-        lineno = inspect.getsourcelines(obj)[1]
-    elif len(parts) == 2:
-        obj_name, attr_name = parts
-        obj = getattr(module, obj_name)
-        attr = getattr(obj, attr_name)
-        if inspect.isfunction(attr):
-            mod = inspect.getmodule(attr)
-            if not mod:
-                return None
-            filename = mod.__name__.replace(".", "/")
-            lineno = inspect.getsourcelines(attr)[1]
-        else:
-            return None
-    else:
-        return None
-
-    return f"https://github.com/{organization}/{package}/blob/main/src/{filename}.py#L{lineno}"
-
+linkcode_resolve = sphinx_compas2_theme.get_linkcode_resolve(organization, package)
 
 # extlinks
 
-
-extlinks = {
-    "rhino": ("https://developer.rhino3d.com/api/RhinoCommon/html/T_%s.htm", "%s"),
-    "blender": ("https://docs.blender.org/api/2.93/%s.html", "%s"),
-}
+extlinks = {}
 
 # from pytorch
 
-from sphinx.writers import html, html5
-
-
-def replace(Klass):
-    old_call = Klass.visit_reference
-
-    def visit_reference(self, node):
-        if "refuri" in node:
-            refuri = node.get("refuri")
-            if "generated" in refuri:
-                href_anchor = refuri.split("#")
-                if len(href_anchor) > 1:
-                    href = href_anchor[0]
-                    anchor = href_anchor[1]
-                    page = href.split("/")[-1]
-                    parts = page.split(".")
-                    if parts[-1] == "html":
-                        pagename = ".".join(parts[:-1])
-                        if anchor == pagename:
-                            node["refuri"] = href
-        return old_call(self, node)
-
-    Klass.visit_reference = visit_reference
-
-
-replace(html.HTMLTranslator)
-replace(html5.HTML5Translator)
+sphinx_compas2_theme.replace(html.HTMLTranslator)
+sphinx_compas2_theme.replace(html5.HTML5Translator)
 
 # -- Options for HTML output ----------------------------------------------
 
-html_theme = "pydata_sphinx_theme"
-html_logo = "_static/compas_icon.png"
+html_theme = "sidebaronly"
 html_title = project
-html_favicon = "_static/compas.ico"
+
+favicons = [
+    {
+        "rel": "icon",
+        "href": "compas.ico",  # relative to the static path
+    }
+]
 
 html_theme_options = {
-    "use_repository_button": True,
-    "logo": {
-        "text": project,
-        "image_light": "_static/compas_icon.png",
-        "image_dark": "_static/compas_icon_white.png",
-    },
+    "icon_links": [
+        {
+            "name": "GitHub",
+            "url": f"https://github.com/{organization}/{package}",
+            "icon": "fa-brands fa-github",
+            "type": "fontawesome",
+        },
+        {
+            "name": "Discourse",
+            "url": "http://forum.compas-framework.org/",
+            "icon": "fa-brands fa-discourse",
+            "type": "fontawesome",
+        },
+        {
+            "name": "PyPI",
+            "url": f"https://pypi.org/project/{package}/",
+            "icon": "fa-brands fa-python",
+            "type": "fontawesome",
+        },
+    ],
     "switcher": {
         "json_url": f"https://raw.githubusercontent.com/{organization}/{package}/gh-pages/versions.json",
         "version_match": version,
     },
-    "check_switcher": False,
-    "navigation_depth": 3,
-    "show_nav_level": 1,
-    "show_toc_level": 2,
-    "pygment_light_style": "default",
-    "pygment_dark_style": "monokai",
-}
-
-html_theme_options["icon_links"] = [
-    {
-        "name": "GitHub",
-        "url": f"https://github.com/{organization}/{package}",
-        "icon": "fa-brands fa-github",
-        "type": "fontawesome",
-    },
-    {
-        "name": "Discourse",
-        "url": "http://forum.compas-framework.org/",
-        "icon": "fa-brands fa-discourse",
-        "type": "fontawesome",
-    },
-    {
-        "name": "PyPI",
-        "url": "https://pypi.org/project/compas-libigl/",
-        "icon": "fa-brands fa-python",
-        "type": "fontawesome",
+    "logo": {
+        "image_light": "_static/compas_icon_white.png",  # relative to parent of conf.py
+        "image_dark": "_static/compas_icon_white.png",  # relative to parent of conf.py
+        "text": project,
     },
-]
-
-html_theme_options["navbar_start"] = [
-    "navbar-logo",
-]
-
-html_theme_options["navbar_end"] = [
-    "version-switcher",
-    "theme-switcher",
-    "navbar-icon-links",
-]
-
-
-html_sidebars = {
-    "**": [
-        "sbt-sidebar-nav.html",
-        "compas-sidebar-footer.html",
-    ]
 }
 
 html_context = {
@@ -304,11 +141,10 @@ def visit_reference(self, node):
     "github_repo": package,
     "github_version": "main",
     "doc_path": "docs",
-    "default_theme": "light",
 }
 
-html_static_path = ["_static"]
-html_css_files = ["compas.css"]
+html_static_path = sphinx_compas2_theme.get_html_static_path() + ["_static"]
+html_css_files = []
 html_extra_path = []
 html_last_updated_fmt = ""
 html_copy_source = False
diff --git a/docs/installation.rst b/docs/installation.rst
index c19b731..acf8fd3 100644
--- a/docs/installation.rst
+++ b/docs/installation.rst
@@ -2,16 +2,24 @@
 Installation
 ********************************************************************************
 
-We are working on a ``conda-forge`` package for :mod:`compas_libigl`.
-However, it is currently not available, yet.
-In the meantime, :mod:`compas_libigl` can be installed "from source" using a combination of ``conda`` and ``pip``.
+Stable
+======
+
+.. code-block:: bash
+
+    conda install -c conda-forge compas_libigl
+
+Dev Install
+===========
+
+Adevelopment version of :mod:`compas_libigl` can be installed "from source" using a combination of ``conda`` and ``pip``.
 
 Create a ``conda`` environment with the required dependencies and activate it.
-Note that you can choose a different name for the environment than ``igl``.
+Note that you can choose a different name for the environment than ``igl-dev``.
 
 .. code-block:: bash
 
-    conda create -n igl python=3.7 git cmake">=3.14" boost eigen=3.3 compas
+    conda create -n igl-dev python=3.9 git cmake">=3.14" boost eigen=3.3 pybind11
     conda activate igl
 
 Get a local copy of the source code of :mod:`compas_libigl` with all submodules.
diff --git a/recipe/sha256.py b/recipe/sha256.py
index 4d0895b..f0c588e 100644
--- a/recipe/sha256.py
+++ b/recipe/sha256.py
@@ -1,7 +1,7 @@
 import hashlib
 from pathlib import Path
 
-FILE = Path(__file__).parent / "compas_libigl-0.2.5.tar.gz"
+FILE = Path(__file__).parent / "compas_libigl-0.3.1.tar.gz"
 
 with open(FILE, "rb") as f:
     data = f.read()
diff --git a/requirements-dev.txt b/requirements-dev.txt
index 014564f..164431b 100644
--- a/requirements-dev.txt
+++ b/requirements-dev.txt
@@ -7,21 +7,7 @@ doc8
 flake8
 invoke >=0.14
 isort
-jinja2 >= 3.0
-numpydoc
-pydata-sphinx-theme
-pydocstyle
-pytest
-pytest-mock
-sphinx ==4.5
-sphinx_compas_theme >=0.15.18
-sphinx-design
-sphinx-inline-tabs
-sphinx-togglebutton
-sphinx-remove-toctrees
-sphinx-copybutton
-sphinxcontrib-bibtex
-sphinxcontrib-youtube
+sphinx_compas2_theme
 twine
 wheel
 -e .