requirements.txt

#
# This file is autogenerated by pip-compile with Python 3.11
# by the following command:
#
#    pip-compile --output-file=requirements.txt --strip-extras pyproject.toml
#
absl-py==2.1.0
    # via
    #   tensorboard
    #   tensorflow
antspyx==0.4.2
    # via
    #   bidsmreye (pyproject.toml)
    #   deepmreye
anyio==4.4.0
    # via
    #   httpx
    #   jupyter-server
argon2-cffi==23.1.0
    # via jupyter-server
argon2-cffi-bindings==21.2.0
    # via argon2-cffi
arrow==1.3.0
    # via isoduration
astor==0.8.1
    # via formulaic
asttokens==2.4.1
    # via stack-data
astunparse==1.6.3
    # via tensorflow
async-lru==2.0.4
    # via jupyterlab
attrs==23.2.0
    # via
    #   bidsmreye (pyproject.toml)
    #   jsonschema
    #   referencing
babel==2.15.0
    # via jupyterlab-server
beautifulsoup4==4.12.3
    # via nbconvert
bids-validator==1.14.6
    # via pybids
bleach==6.1.0
    # via nbconvert
cachetools==5.4.0
    # via google-auth
certifi==2024.7.4
    # via
    #   httpcore
    #   httpx
    #   requests
cffi==1.16.0
    # via argon2-cffi-bindings
charset-normalizer==3.3.2
    # via requests
chart-studio==1.1.0
    # via antspyx
click==8.1.7
    # via pybids
comm==0.2.2
    # via
    #   ipykernel
    #   ipywidgets
contourpy==1.2.1
    # via matplotlib
cycler==0.12.1
    # via matplotlib
debugpy==1.8.2
    # via ipykernel
decorator==5.1.1
    # via ipython
deepmreye==0.2.1
    # via bidsmreye (pyproject.toml)
defusedxml==0.7.1
    # via nbconvert
docopt==0.6.2
    # via num2words
executing==2.0.1
    # via stack-data
fastjsonschema==2.20.0
    # via nbformat
flatbuffers==24.3.25
    # via tensorflow
fonttools==4.53.1
    # via matplotlib
formulaic==0.5.2
    # via pybids
fqdn==1.5.1
    # via jsonschema
fsspec==2024.6.1
    # via universal-pathlib
gast==0.6.0
    # via tensorflow
google-auth==2.32.0
    # via
    #   google-auth-oauthlib
    #   tensorboard
google-auth-oauthlib==1.2.1
    # via tensorboard
google-pasta==0.2.0
    # via tensorflow
greenlet==3.0.3
    # via sqlalchemy
grpcio==1.65.2
    # via
    #   tensorboard
    #   tensorflow
h11==0.14.0
    # via httpcore
h5py==3.11.0
    # via tensorflow
httpcore==1.0.5
    # via httpx
httpx==0.27.0
    # via jupyterlab
idna==3.7
    # via
    #   anyio
    #   httpx
    #   jsonschema
    #   requests
imageio==2.34.2
    # via scikit-image
interface-meta==1.3.0
    # via formulaic
ipykernel==6.29.5
    # via
    #   jupyter
    #   jupyter-console
    #   jupyterlab
    #   qtconsole
ipython==8.26.0
    # via
    #   ipykernel
    #   ipywidgets
    #   jupyter-console
ipywidgets==8.1.3
    # via jupyter
isoduration==20.11.0
    # via jsonschema
jedi==0.19.1
    # via ipython
jinja2==3.1.4
    # via
    #   bidsmreye (pyproject.toml)
    #   jupyter-server
    #   jupyterlab
    #   jupyterlab-server
    #   nbconvert
joblib==1.4.2
    # via scikit-learn
json5==0.9.25
    # via jupyterlab-server
jsonpointer==3.0.0
    # via jsonschema
jsonschema==4.23.0
    # via
    #   jupyter-events
    #   jupyterlab-server
    #   nbformat
jsonschema-specifications==2023.12.1
    # via jsonschema
jupyter==1.0.0
    # via deepmreye
jupyter-client==8.6.2
    # via
    #   ipykernel
    #   jupyter-console
    #   jupyter-server
    #   nbclient
    #   qtconsole
jupyter-console==6.6.3
    # via jupyter
jupyter-core==5.7.2
    # via
    #   ipykernel
    #   jupyter-client
    #   jupyter-console
    #   jupyter-server
    #   jupyterlab
    #   nbclient
    #   nbconvert
    #   nbformat
    #   qtconsole
jupyter-events==0.10.0
    # via jupyter-server
jupyter-lsp==2.2.5
    # via jupyterlab
jupyter-server==2.14.2
    # via
    #   jupyter-lsp
    #   jupyterlab
    #   jupyterlab-server
    #   notebook
    #   notebook-shim
jupyter-server-terminals==0.5.3
    # via jupyter-server
jupyterlab==4.2.4
    # via notebook
jupyterlab-pygments==0.3.0
    # via nbconvert
jupyterlab-server==2.27.3
    # via
    #   jupyterlab
    #   notebook
jupyterlab-widgets==3.0.11
    # via ipywidgets
kaleido==0.2.1
    # via bidsmreye (pyproject.toml)
keras==2.15.0
    # via
    #   bidsmreye (pyproject.toml)
    #   tensorflow
kiwisolver==1.4.5
    # via matplotlib
lazy-loader==0.4
    # via scikit-image
libclang==18.1.1
    # via tensorflow
markdown==3.6
    # via tensorboard
markdown-it-py==3.0.0
    # via rich
markupsafe==2.1.5
    # via
    #   jinja2
    #   nbconvert
    #   werkzeug
matplotlib==3.9.1
    # via
    #   antspyx
    #   deepmreye
matplotlib-inline==0.1.7
    # via
    #   ipykernel
    #   ipython
mdurl==0.1.2
    # via markdown-it-py
mistune==3.0.2
    # via nbconvert
ml-dtypes==0.3.2
    # via tensorflow
nbclient==0.10.0
    # via nbconvert
nbconvert==7.16.4
    # via
    #   jupyter
    #   jupyter-server
nbformat==5.10.4
    # via
    #   jupyter-server
    #   nbclient
    #   nbconvert
nest-asyncio==1.6.0
    # via ipykernel
networkx==3.3
    # via scikit-image
nibabel==5.2.1
    # via
    #   antspyx
    #   pybids
notebook==7.2.1
    # via jupyter
notebook-shim==0.2.4
    # via
    #   jupyterlab
    #   notebook
num2words==0.5.13
    # via pybids
numpy==1.26.4
    # via
    #   antspyx
    #   contourpy
    #   deepmreye
    #   formulaic
    #   h5py
    #   imageio
    #   matplotlib
    #   ml-dtypes
    #   nibabel
    #   opt-einsum
    #   pandas
    #   patsy
    #   pybids
    #   scikit-image
    #   scikit-learn
    #   scipy
    #   statsmodels
    #   tensorboard
    #   tensorflow
    #   tifffile
oauthlib==3.2.2
    # via requests-oauthlib
opt-einsum==3.3.0
    # via tensorflow
overrides==7.7.0
    # via jupyter-server
packaging==24.1
    # via
    #   ipykernel
    #   jupyter-server
    #   jupyterlab
    #   jupyterlab-server
    #   lazy-loader
    #   matplotlib
    #   nbconvert
    #   nibabel
    #   plotly
    #   pooch
    #   qtconsole
    #   qtpy
    #   scikit-image
    #   statsmodels
    #   tensorflow
pandas==2.2.2
    # via
    #   antspyx
    #   deepmreye
    #   formulaic
    #   pybids
    #   statsmodels
pandocfilters==1.5.1
    # via nbconvert
parso==0.8.4
    # via jedi
patsy==0.5.6
    # via statsmodels
pexpect==4.9.0
    # via ipython
pillow==10.4.0
    # via
    #   antspyx
    #   imageio
    #   matplotlib
    #   scikit-image
platformdirs==4.2.2
    # via
    #   jupyter-core
    #   pooch
plotly==5.23.0
    # via
    #   chart-studio
    #   deepmreye
pooch==1.8.2
    # via bidsmreye (pyproject.toml)
prometheus-client==0.20.0
    # via jupyter-server
prompt-toolkit==3.0.47
    # via
    #   ipython
    #   jupyter-console
protobuf==4.25.4
    # via
    #   tensorboard
    #   tensorflow
psutil==6.0.0
    # via ipykernel
ptyprocess==0.7.0
    # via
    #   pexpect
    #   terminado
pure-eval==0.2.3
    # via stack-data
pyasn1==0.6.0
    # via
    #   pyasn1-modules
    #   rsa
pyasn1-modules==0.4.0
    # via google-auth
pybids==0.17.0
    # via bidsmreye (pyproject.toml)
pycparser==2.22
    # via cffi
pygments==2.18.0
    # via
    #   ipython
    #   jupyter-console
    #   nbconvert
    #   qtconsole
    #   rich
pyparsing==3.1.2
    # via matplotlib
python-dateutil==2.9.0.post0
    # via
    #   arrow
    #   jupyter-client
    #   matplotlib
    #   pandas
python-json-logger==2.0.7
    # via jupyter-events
pytz==2024.1
    # via pandas
pyyaml==6.0.1
    # via
    #   antspyx
    #   jupyter-events
pyzmq==26.0.3
    # via
    #   ipykernel
    #   jupyter-client
    #   jupyter-console
    #   jupyter-server
    #   qtconsole
qtconsole==5.5.2
    # via jupyter
qtpy==2.4.1
    # via qtconsole
referencing==0.35.1
    # via
    #   jsonschema
    #   jsonschema-specifications
    #   jupyter-events
requests==2.32.3
    # via
    #   chart-studio
    #   jupyterlab-server
    #   pooch
    #   requests-oauthlib
    #   tensorboard
requests-oauthlib==2.0.0
    # via google-auth-oauthlib
retrying==1.3.4
    # via chart-studio
rfc3339-validator==0.1.4
    # via
    #   jsonschema
    #   jupyter-events
rfc3986-validator==0.1.1
    # via
    #   jsonschema
    #   jupyter-events
rich==13.7.1
    # via rich-argparse
rich-argparse==1.5.2
    # via bidsmreye (pyproject.toml)
rpds-py==0.19.1
    # via
    #   jsonschema
    #   referencing
rsa==4.9
    # via google-auth
scikit-image==0.24.0
    # via antspyx
scikit-learn==1.5.1
    # via
    #   antspyx
    #   deepmreye
scipy==1.14.0
    # via
    #   antspyx
    #   deepmreye
    #   formulaic
    #   pybids
    #   scikit-image
    #   scikit-learn
    #   statsmodels
send2trash==1.8.3
    # via jupyter-server
six==1.16.0
    # via
    #   asttokens
    #   astunparse
    #   bleach
    #   chart-studio
    #   google-pasta
    #   patsy
    #   python-dateutil
    #   retrying
    #   rfc3339-validator
    #   tensorboard
    #   tensorflow
sniffio==1.3.1
    # via
    #   anyio
    #   httpx
soupsieve==2.5
    # via beautifulsoup4
sqlalchemy==2.0.31
    # via pybids
stack-data==0.6.3
    # via ipython
statsmodels==0.14.2
    # via antspyx
tenacity==9.0.0
    # via plotly
tensorboard==2.15.2
    # via tensorflow
tensorboard-data-server==0.7.2
    # via tensorboard
tensorflow==2.15.1
    # via deepmreye
tensorflow-estimator==2.15.0
    # via tensorflow
tensorflow-io-gcs-filesystem==0.37.1
    # via tensorflow
termcolor==2.4.0
    # via tensorflow
terminado==0.18.1
    # via
    #   jupyter-server
    #   jupyter-server-terminals
threadpoolctl==3.5.0
    # via scikit-learn
tifffile==2024.7.24
    # via scikit-image
tinycss2==1.3.0
    # via nbconvert
tornado==6.4.1
    # via
    #   ipykernel
    #   jupyter-client
    #   jupyter-server
    #   jupyterlab
    #   notebook
    #   terminado
tqdm==4.66.4
    # via bidsmreye (pyproject.toml)
traitlets==5.14.3
    # via
    #   comm
    #   ipykernel
    #   ipython
    #   ipywidgets
    #   jupyter-client
    #   jupyter-console
    #   jupyter-core
    #   jupyter-events
    #   jupyter-server
    #   jupyterlab
    #   matplotlib-inline
    #   nbclient
    #   nbconvert
    #   nbformat
    #   qtconsole
types-python-dateutil==2.9.0.20240316
    # via arrow
typing-extensions==4.12.2
    # via
    #   formulaic
    #   ipython
    #   sqlalchemy
    #   tensorflow
tzdata==2024.1
    # via pandas
universal-pathlib==0.2.2
    # via pybids
uri-template==1.3.0
    # via jsonschema
urllib3==2.2.2
    # via requests
wcwidth==0.2.13
    # via prompt-toolkit
webcolors==24.6.0
    # via
    #   antspyx
    #   jsonschema
webencodings==0.5.1
    # via
    #   bleach
    #   tinycss2
websocket-client==1.8.0
    # via jupyter-server
werkzeug==3.0.3
    # via tensorboard
wheel==0.43.0
    # via astunparse
widgetsnbextension==4.0.11
    # via ipywidgets
wrapt==1.14.1
    # via
    #   formulaic
    #   tensorflow

# The following packages are considered to be unsafe in a requirements file:
# setuptools