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[FIX] properly identify run level contrasts #1069

[FIX] properly identify run level contrasts

[FIX] properly identify run level contrasts #1069

Workflow file for this run

---
name: 'CLI: tests'
on:
push:
branches:
- main
pull_request:
branches:
- main
jobs:
tests_cli:
runs-on: ubuntu-22.04
# only trigger update on upstream repo
if: github.repository_owner == 'cpp-lln-lab'
steps:
- name: Install dependencies
run: |
sudo apt-get -y -qq update
sudo apt-get -y install octave liboctave-dev
- name: Info
run: |
octave --version
- uses: actions/setup-node@v4
with:
node-version: 18
- uses: actions/setup-python@v5
with:
python-version: '3.10'
- name: Clone bidspm
uses: actions/checkout@v4
with:
submodules: recursive
fetch-depth: 0
- name: Install validators
run: |
make install
pip install .[dev]
- name: Run tests and generate coverage report
run: |
coverage erase
coverage run --source src -m pytest
coverage xml
- name: Code coverage
uses: codecov/codecov-action@v4
with:
file: coverage.xml
flags: cli
name: codecov-cli
fail_ci_if_error: false
# token: ${{ secrets.CODECOV_TOKEN }} # not required but might help API rate limits