run_tests_cli.yml

---
name: 'CLI: tests'

on:

    push:
        branches:
        -   main
    pull_request:
        branches:
        -   main

jobs:
    tests_cli:

        runs-on: ubuntu-22.04

    # only trigger update on upstream repo
        if: github.repository_owner == 'cpp-lln-lab'

        steps:

        -   name: Install dependencies
            run: |
                sudo apt-get -y -qq update
                sudo apt-get -y install octave liboctave-dev

        -   name: Info
            run: |
                octave --version

        -   uses: actions/setup-node@v4
            with:
                node-version: 18

        -   uses: actions/setup-python@v5
            with:
                python-version: '3.10'

        -   name: Clone bidspm
            uses: actions/checkout@v4
            with:
                submodules: recursive
                fetch-depth: 0

        -   name: Install validators
            run: |
                make install
                pip install .[dev]

        -   name: Run tests and generate coverage report
            run: |
                coverage erase
                coverage run --source src -m pytest
                coverage xml

        -   name: Code coverage
            uses: codecov/codecov-action@v4
            with:
                file: coverage.xml
                flags: cli
                name: codecov-cli
                fail_ci_if_error: false
        # token: ${{ secrets.CODECOV_TOKEN }}  # not required but might help API rate limits