diff --git a/bidspm.def b/bidspm.def
index 68fb22b9..8da588fd 100644
--- a/bidspm.def
+++ b/bidspm.def
@@ -51,11 +51,11 @@ From: bids/base_validator:1.13.1
     ln -s /opt/spm12/bin/spm12-octave /usr/local/bin/spm12
 
     git -C /opt/bidspm restore .
-    git -C /opt/bidspm/lib/CPP_ROI/atlas/HCPex reset --hard
-    git -C /opt/bidspm/lib/CPP_ROI/atlas/HCPex clean --force -dfx
+    git submodule foreach --recursive 'git reset --hard'
+    git submodule foreach --recursive 'git clean --force -dfx'
     git -C /opt/bidspm/ status
-    git -C /opt/bidspm/lib/spm_2_bids status
-    git -C /opt/bidspm/lib/CPP_ROI status
+
+
 
     pip install --upgrade pip
     pip install -r /opt/bidspm/requirements.txt