From d6a2a64a27695b3bbb5883912758480a4f88b473 Mon Sep 17 00:00:00 2001
From: Remi Gau <remi_gau@hotmail.com>
Date: Sat, 17 Aug 2024 10:32:31 +0200
Subject: [PATCH] fix doc

---
 .readthedocs.yml               | 3 +++
 docs/Makefile                  | 2 +-
 docs/source/conf.py            | 3 +--
 docs/source/demos/openneuro.md | 2 +-
 pyproject.toml                 | 2 +-
 5 files changed, 7 insertions(+), 5 deletions(-)

diff --git a/.readthedocs.yml b/.readthedocs.yml
index 2aa58616..51b8ea83 100644
--- a/.readthedocs.yml
+++ b/.readthedocs.yml
@@ -6,6 +6,9 @@
 # Required
 version: 2
 
+submodules:
+    exclude: all
+
 build:
     os: ubuntu-22.04
     tools:
diff --git a/docs/Makefile b/docs/Makefile
index f982decb..878e08b3 100644
--- a/docs/Makefile
+++ b/docs/Makefile
@@ -15,7 +15,7 @@ BROWSER := python -c "$$BROWSER_PYSCRIPT"
 
 # You can set these variables from the command line, and also
 # from the environment for the first two.
-SPHINXOPTS    ?=
+SPHINXOPTS    ?= -v
 SPHINXBUILD   ?= sphinx-build
 SOURCEDIR     = source
 BUILDDIR      = build
diff --git a/docs/source/conf.py b/docs/source/conf.py
index ea04314c..16a9c4fb 100644
--- a/docs/source/conf.py
+++ b/docs/source/conf.py
@@ -58,12 +58,11 @@
 exclude_patterns = [
     "**/examples/*",
     "**/images/*",
-    "**/lib/**",
     "demo",
     "defaults",
     "examples",
     "images",
-    "lib",
+    "../lib/**/*.m",
     "tests/**/*.m",
 ]
 
diff --git a/docs/source/demos/openneuro.md b/docs/source/demos/openneuro.md
index 00026f14..bf54539c 100644
--- a/docs/source/demos/openneuro.md
+++ b/docs/source/demos/openneuro.md
@@ -158,5 +158,5 @@ transformers cannot yet be appled to confounds
 ### Scripts
 
 ```{eval-rst}
-.. autoscript:: ds003379_run
+.. autoscript:: ds003397_run
 ```
diff --git a/pyproject.toml b/pyproject.toml
index 4859c64b..29c494fa 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -36,7 +36,7 @@ dev = [
     'pandas'
 ]
 doc = [
-    "urllib3==1.26.15",
+    "urllib3",
     "faqtory",
     "myst-parser",
     "sphinx",