python-package-conda.yml

name: CI

on: [push]

jobs:
  build:
    strategy:
      matrix:
        os: [ubuntu-22.04]
        pyv: [3.9, '3.10', 3.11, 3.12]
      max-parallel: 5
    runs-on: ${{ matrix.os }}
    permissions:
      id-token: write
    steps:
    - uses: actions/checkout@v4
      with:
        fetch-depth: 0
    - name: Set up Python ${{ matrix.pyv }}
      run: |
        conda install -y python=${{ matrix.pyv }}
    - name: Add conda to system path
      run: |
        # $CONDA is an environment variable pointing to the root of the miniconda directory
        echo $CONDA/bin >> $GITHUB_PATH
    - name: Install dependencies
      run: |
        conda env update --file environment.yml --name base
        conda list
    - name: Lint with flake8
      run: |
        conda install flake8
        # stop the build if there are Python syntax errors or undefined names
        flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
        # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
        flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
    - name: Install with pip
      run: |
        pip install -e .
    - name: Test with pytest
      run: |
        conda install pytest
        pytest

  condapublish:
    strategy:
      matrix:
        os: [ubuntu-22.04]
        pyv: ["3.10"]
      max-parallel: 5
    runs-on: ${{ matrix.os }}
    permissions:
      id-token: write
      contents: write
    steps:
    - uses: actions/checkout@v4
      with:
        fetch-depth: 0
    - name: Set up Python ${{ matrix.pyv }}
      run: |
        conda install -y python=${{ matrix.pyv }}
    - name: Add conda to system path
      run: |
        # $CONDA is an environment variable pointing to the root of the miniconda directory
        echo $CONDA/bin >> $GITHUB_PATH
    - name: Install dependencies
      run: |
        conda env update --file environment.yml --name base
        sudo apt-get install python3-numpy
    - name: Get version
      run: |
        output=$(python .github/versionScript.py)
        echo "version=$output" >> $GITHUB_OUTPUT
      id: step1  
    - name: Write
      uses: 1arp/create-a-file-action@0.4.5
      with:
        path: '.'
        isAbsolutePath: true
        file: '.github/versionBackup.txt'
        content: |
          ${{ steps.step1.outputs.version }}
          
    - name: Push changes    
      run: |
        git config --global user.email "rcervino@ucm.es"
        git config --global user.name "rcervinoucm"
        git status
        git add .
        git commit -m "version update" --allow-empty
        git push -u origin master
        
    - name: publish-to-conda
      uses: fcakyon/conda-publish-action@v1.3
      with:
        subdir: 'conda'
        anacondatoken: ${{ secrets.ANACONDA_TOKEN }}


        
  test:
    strategy:
      matrix:
        os: [ubuntu-22.04]
        pyv: ["3.10"]
      max-parallel: 5
    runs-on: ${{ matrix.os }}
    permissions:
      id-token: write
      contents: write
    steps:
    - uses: actions/checkout@v4
      with:
        fetch-depth: 0
    - name: Set up Python ${{ matrix.pyv }}
      run: |
        conda install -y python=${{ matrix.pyv }}
    - name: Add conda to system path
      run: |
        # $CONDA is an environment variable pointing to the root of the miniconda directory
        echo $CONDA/bin >> $GITHUB_PATH
    - name: Get version
      run: |
        output=$(python .github/versionScript.py)
        echo "version=$output" >> $GITHUB_OUTPUT
      id: step1  
    - name: Write
      uses: 1arp/create-a-file-action@0.4.5
      with:
        path: '.'
        isAbsolutePath: true
        file: '.github/versionBackup.txt'
        content: |
          ${{ steps.step1.outputs.version }}