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requirements.txt
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requirements.txt
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absl-py==2.1.0
accelerate==0.32.1
aiohttp==3.9.5
aiosignal==1.3.1
annotated-types==0.7.0
antlr4-python3-runtime==4.9.3
async-timeout==4.0.3
attrs==23.2.0
beautifulsoup4==4.12.3
biopython==1.83
bleach==6.1.0
cachetools==5.3.3
charset-normalizer==3.3.2
click==8.1.7
cmake==3.29.6
datasets==2.16.0
deepspeed==0.14.4
defusedxml==0.7.1
dill==0.3.7
docker-pycreds==0.4.0
docopt==0.6.2
einops==0.8.0
fastjsonschema==2.20.0
filelock==3.13.1
fire==0.6.0
frozenlist==1.4.1
fsspec==2023.10.0
gdown==5.2.0
genomic_benchmarks==0.0.9
gitdb==4.0.11
GitPython==3.1.43
google-auth==2.30.0
google-auth-oauthlib==1.0.0
grpcio==1.64.1
hjson==3.1.0
huggingface-hub==0.23.4
hydra-core==1.3.2
idna==3.7
importlib_resources==6.4.0
ipython==8.12.3
Jinja2==3.1.3
joblib==1.4.2
jsonschema==4.23.0
jsonschema-specifications==2023.12.1
jupyterlab_pygments==0.3.0
liftover==1.1.18
lit==18.1.8
Markdown==3.6
markdown-it-py==3.0.0
MarkupSafe==2.1.5
mdurl==0.1.2
mistune==3.0.2
mpmath==1.3.0
multidict==6.0.5
multiprocess==0.70.15
nbclient==0.10.0
nbconvert==7.16.4
nbformat==5.10.4
networkx==3.0
ninja==1.11.1.1
numpy==1.24.1
oauthlib==3.2.2
omegaconf==2.3.0
opt-einsum==3.3.0
pandas==2.0.3
pandocfilters==1.5.1
peft==0.11.1
pillow==10.2.0
pipreqs==0.5.0
pkgutil_resolve_name==1.3.10
polars==0.20.13
protobuf==5.27.2
py-cpuinfo==9.0.0
pyarrow==16.1.0
pyarrow-hotfix==0.6
pyasn1==0.6.0
pyasn1_modules==0.4.0
pydantic==2.8.2
pydantic_core==2.20.1
pyfaidx==0.8.1.1
pynvml==11.5.0
PySocks==1.7.1
pytz==2024.1
PyYAML==6.0.1
referencing==0.35.1
regex==2024.5.15
requests==2.32.3
requests-oauthlib==2.0.0
rich==13.7.1
rpds-py==0.20.0
rsa==4.9
safetensors==0.4.3
scikit-learn==1.3.2
scipy==1.10.1
sentry-sdk==2.7.1
setproctitle==1.3.3
smmap==5.0.1
soupsieve==2.5
sympy==1.12
tensorboard==2.14.0
tensorboard-data-server==0.7.2
termcolor==2.4.0
threadpoolctl==3.5.0
timm==0.9.16
tinycss2==1.3.0
tokenizers==0.13.3
tqdm==4.66.4
transformers==4.28.0
triton==2.0.0
tzdata==2024.1
urllib3==2.2.2
wandb==0.17.3
webencodings==0.5.1
Werkzeug==3.0.3
xxhash==3.4.1
yarg==0.1.9
yarl==1.9.4