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DESCRIPTION
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DESCRIPTION
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Package: breathtestcore
Title: Core Functions to Read and Fit 13c Time Series from
Breath Tests
Version: 0.8.8
Authors@R:
c(person(given = "Dieter",
family = "Menne",
role = c("aut", "cre"),
email = "dieter.menne@menne-biomed.de"),
person(given = "Menne Biomed Consulting Tuebingen",
role = "cph"),
person(given = "Benjamin",
family = "Misselwitz",
role = "fnd"),
person(given = "Mark",
family = "Fox",
role = "fnd"),
person(given = "Andreas",
family = "Steingoetter",
role = "dtc"),
person(given = "University Hospital of Zurich, Dep. Gastroenterology",
role = c("fnd", "dtc")))
Description: Reads several formats of 13C data (IRIS/Wagner,
BreathID) and CSV. Creates artificial sample data for testing. Fits
Maes/Ghoos, Bluck-Coward self-correcting formula using 'nls', 'nlme'.
Methods to fit breath test curves with Bayesian Stan methods are
refactored to package 'breathteststan'. For a Shiny GUI, see package
'dmenne/breathtestshiny' on github.
License: GPL-3
URL: https://github.com/dmenne/breathtestcore,
https://dmenne.github.io/breathtestcore/
BugReports: https://github.com/dmenne/breathtestcore/issues
Depends:
R (>= 4.0.0)
Imports:
assertthat,
dplyr,
ggfittext,
ggplot2,
broom (>= 0.7.0),
graphics,
grid,
MASS,
methods,
multcomp,
nlme,
purrr,
readr,
readxl,
signal,
stats,
stringr,
tibble (>= 3.0.0),
tidyr,
tools,
utils,
xml2
Suggests:
base,
gridExtra,
qpdf,
knitr,
rmarkdown,
testthat(>= 2.99),
breathteststan,
covr
Remotes: dmenne/breathtestan
VignetteBuilder:
knitr
Encoding: UTF-8
SystemRequirements: pandoc
Config/testthat/edition: 3
Config/testthat/parallel: true
RoxygenNote: 7.3.2