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dittoHeatmap with pale heat map colors #144
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Hmmm very odd and I'm tempted to say yes, it might be a macOS/Quartz related issue but only because I don't have another explanation. I think of I have noticed in the past, when mucking with dittoHeatmap outputs in Illustrator, that there was a white background and the heatmap elements weren't completely opaque. But it is very odd to me that the difference is so profound for you as it has always been small enough for me that I hadn't even noticed until I moved to Illustrator! After poking at the |
This is due to the scales being much larger in the first plot. Providing the breaks directly will fix it. |
Hi,
Thanks for that great package.
Just started to explore it. When I use
dittoHeatmap
on Seurat objects it runs without errors and produces the expected output in terms of annotation etc. but the heat map colors are pale, like there is a some layer on top of it. Changing the backend toComplexHeatmap
does not help.Extracting the data and using
ComplexHeatmap
directly, works.Maybe this a macOS/Quartz related issue?
Thanks,
Kemal
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