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Feature/use anemoi transform #127

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merged 19 commits into from
Nov 14, 2024
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@floriankrb floriankrb merged commit a5a9ff7 into develop Nov 14, 2024
16 of 22 checks passed
@floriankrb floriankrb deleted the feature/use-anemoi-transform branch November 14, 2024 11:11
floriankrb added a commit that referenced this pull request Nov 15, 2024
* Add contributors (#105)

* Add contributors
Co-authored-by: Mario Santa Cruz <48736305+JPXKQX@users.noreply.github.com>

* Feature/masks (#104)

* add masks

Co-authored-by: Florian Pinault <floriankrb@users.noreply.github.com>

* Feature/new checkpoints (#106)

* add masks

* Feature/new datasets (#99)

* main changes

* bugfix

* few bugs and add unit tests

* work with more planetary computer ds

* add optional dependencies

* qa

* make test optional when adls is not installed (#110)

* make test optional when adls is not installed

* changelog

* tests

* tests

* split tests

* Xarray-zarr example dataset recipe (#108)

* add a working xarray-zarr example

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

---------

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: b8raoult <53792887+b8raoult@users.noreply.github.com>

* missing copyrigths

* missing copyrigths (#111)

* missing copyrigths

* fixing --test (changing only the behaviour of creating datasets with --test)

* more on testing

* fix tests

* Feature/support multiple lams to the Cutout class (#113)

* Enhance Cutout class to support multiple LAMs with hierarchical masking.

---------

Co-authored-by: Paulina Met. <paulinast@met.no>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* [pre-commit.ci] pre-commit autoupdate (#112)

* [pre-commit.ci] pre-commit autoupdate

updates:
- [github.com/psf/black-pre-commit-mirror: 24.8.0 → 24.10.0](psf/black-pre-commit-mirror@24.8.0...24.10.0)
- [github.com/astral-sh/ruff-pre-commit: v0.6.9 → v0.7.2](astral-sh/ruff-pre-commit@v0.6.9...v0.7.2)
- [github.com/tox-dev/pyproject-fmt: 2.2.4 → v2.5.0](tox-dev/pyproject-fmt@2.2.4...v2.5.0)

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

---------

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* Update .pre-commit-config.yaml (#120)

* fix qa for the notebook on multilam (#123)

* feature/fix qa (#124)

* fix qa for the notebook on multilam
* fix qa for the yaml for multilam

* Naming guidelines not available to all users. fixing #119 (#125)

* upload with ssh (#94)

* add copy to ssh target

* Feature/new checkpoints (#107)

* add masks
* save masks to checkpoint
* name supporting_arrays
* better support for cutout
* force np.datetime64 is seconds
---------

Co-authored-by: Florian Pinault <floriankrb@users.noreply.github.com>

* Feature/merge (#126)

* save masks to checkpoint
* force np.datetime64 is seconds
* Call filters from anemoi-transform
* when merging datasets, consider missing dates
* add gcd for frequency

---------

Co-authored-by: Florian Pinault <floriankrb@users.noreply.github.com>

* Feature/use anemoi transform (#127)

* Call filters from anemoi-transform

---------

Co-authored-by: Florian Pinault <floriankrb@users.noreply.github.com>

* Revert "Feature/merge (#126)" "Feature/new checkpoints (#107)" "upload with ssh (#94)"

* redo "Revert "Feature/merge (#126)" "Feature/new checkpoints (#107)" "upload with ssh (#94)"

* fix merge

* Update to documentation on using missing dates (#128)

* Updated docs on using datasets with missing dates

* Simplify ci: run on develop, and on sundays. And disable downstream-ci-hpc. And test only python 3.11. And test only once when PR are updated. And shortest name to read the full description on github.ci. And test with only ubuntu. (same change as for anemoi-utils ecmwf/anemoi-utils#42) (#129)

* skipping long tests (#132)

---------

Co-authored-by: Matthew Chantry <chantry.m.j@gmail.com>
Co-authored-by: b8raoult <53792887+b8raoult@users.noreply.github.com>
Co-authored-by: Mariah Pope <74685904+mariahpope@users.noreply.github.com>
Co-authored-by: Timothy Smith <smith.timothy.andrew@gmail.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Baudouin Raoult <baudouin.raoult@ecmwf.int>
Co-authored-by: paulina-t <25662348+paulina-t@users.noreply.github.com>
Co-authored-by: Paulina Met. <paulinast@met.no>
Co-authored-by: Jesper Dramsch <jesper.dramsch@ecmwf.int>
Co-authored-by: Håvard Homleid Haugen <148321314+havardhhaugen@users.noreply.github.com>
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2 participants