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environment.yml
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environment.yml
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name: cropmask
channels:
- pytorch
- conda-forge
- defaults
dependencies:
# from solaris env-gpu file
- python>=3.6
- pip>=19.0.3
- affine>=2.3.0
- albumentations=0.4.3
- fiona>=1.7.13
- gdal>=3.0.2
- geopandas>=0.6.2
- matplotlib>=3.1.2
- networkx>=2.4
- numpy>=1.17.3
- opencv>=4.1
- pandas>=0.25.3
- pyproj>=2.1
- pytorch=1.3.1
- pyyaml=5.2
- rasterio>=1.0.23
- requests=2.22.0
- rio-cogeo>=1.1.6
- rtree>=0.9.3
- scikit-image>=0.16.2
- scipy>=1.3.2
- shapely>=1.6.4
- torchvision>=0.4.2
- tqdm>=4.40.0
- urllib3>=1.25.7
- tensorflow-gpu=1.14
- tensorboard
# scientific python
- pyqt
- xlrd # for excel sheets in pandas
- xarray
- dask
# matterport Mask_RCNN requirements
- Pillow==6.1 # pillow 7 breaks torchvision
- cython
- h5py
- IPython[all]
- keras-gpu
# Geo stuff
- rasterstats
- rioxarray
- geocube
- geopy
- cartopy
- contextily
- pysal
- pyproj
- folium
- kealib
- geojson
# Other stuff
- yaml
- jupyterlab
- pip:
- imgaug # for mrcnn
- us
- graphviz
#detectron2 stuff
- git+git://github.com/waspinator/coco.git@2.1.0
- git+git://github.com/waspinator/pycococreator.git@0.2.0
- git+https://github.com/facebookresearch/fvcore
- flit # for installing cropmask in dev env