From 0488edce037ee50c3dafa6d16bda87dd8331a685 Mon Sep 17 00:00:00 2001 From: Nan Xiao Date: Sun, 7 Apr 2024 14:38:51 -0400 Subject: [PATCH 1/2] Update `renv.lock` --- renv.lock | 382 ++++++++++++++++++++++++------------------------------ 1 file changed, 170 insertions(+), 212 deletions(-) diff --git a/renv.lock b/renv.lock index c5e0bf5..e91d054 100644 --- a/renv.lock +++ b/renv.lock @@ -1,6 +1,6 @@ { "R": { - "Version": "4.3.1", + "Version": "4.3.3", "Repositories": [ { "Name": "CRAN", @@ -11,14 +11,14 @@ "Packages": { "DBI": { "Package": "DBI", - "Version": "1.1.3", + "Version": "1.2.2", "Source": "Repository", - "Repository": "RSPM", + "Repository": "CRAN", "Requirements": [ "R", "methods" ], - "Hash": "b2866e62bab9378c3cc9476a1954226b" + "Hash": "164809cd72e1d5160b4cb3aa57f510fe" }, "Formula": { "Package": "Formula", @@ -33,7 +33,7 @@ }, "MASS": { "Package": "MASS", - "Version": "7.3-60", + "Version": "7.3-60.0.1", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -44,11 +44,11 @@ "stats", "utils" ], - "Hash": "a56a6365b3fa73293ea8d084be0d9bb0" + "Hash": "b765b28387acc8ec9e9c1530713cb19c" }, "Matrix": { "Package": "Matrix", - "Version": "1.6-1.1", + "Version": "1.6-5", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -61,7 +61,7 @@ "stats", "utils" ], - "Hash": "1a00d4828f33a9d690806e98bd17150c" + "Hash": "8c7115cd3a0e048bda2a7cd110549f7a" }, "R6": { "Package": "R6", @@ -85,33 +85,33 @@ }, "Rcpp": { "Package": "Rcpp", - "Version": "1.0.11", + "Version": "1.0.12", "Source": "Repository", - "Repository": "RSPM", + "Repository": "CRAN", "Requirements": [ "methods", "utils" ], - "Hash": "ae6cbbe1492f4de79c45fce06f967ce8" + "Hash": "5ea2700d21e038ace58269ecdbeb9ec0" }, "V8": { "Package": "V8", - "Version": "4.4.0", + "Version": "4.4.2", "Source": "Repository", - "Repository": "RSPM", + "Repository": "CRAN", "Requirements": [ "Rcpp", "curl", "jsonlite", "utils" ], - "Hash": "df924bedbdcaaf3b1d3ac7ed94f4d001" + "Hash": "ca98390ad1cef2a5a609597b49d3d042" }, "asciicast": { "Package": "asciicast", - "Version": "2.3.0", + "Version": "2.3.1", "Source": "Repository", - "Repository": "RSPM", + "Repository": "CRAN", "Requirements": [ "V8", "cli", @@ -123,7 +123,7 @@ "utils", "withr" ], - "Hash": "87f03b50d163fad8271bc418651a2ca2" + "Hash": "d3231ad4843d771ecce79dfa805e50a2" }, "askpass": { "Package": "askpass", @@ -214,23 +214,25 @@ }, "bslib": { "Package": "bslib", - "Version": "0.5.1", + "Version": "0.7.0", "Source": "Repository", "Repository": "CRAN", "Requirements": [ "R", "base64enc", "cachem", + "fastmap", "grDevices", "htmltools", "jquerylib", "jsonlite", + "lifecycle", "memoise", "mime", "rlang", "sass" ], - "Hash": "283015ddfbb9d7bf15ea9f0b5698f0d9" + "Hash": "8644cc53f43828f19133548195d7e59e" }, "cachem": { "Package": "cachem", @@ -245,7 +247,7 @@ }, "callr": { "Package": "callr", - "Version": "3.7.3", + "Version": "3.7.6", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -254,7 +256,7 @@ "processx", "utils" ], - "Hash": "9b2191ede20fa29828139b9900922e51" + "Hash": "d7e13f49c19103ece9e58ad2d83a7354" }, "cellranger": { "Package": "cellranger", @@ -270,14 +272,14 @@ }, "cli": { "Package": "cli", - "Version": "3.6.1", + "Version": "3.6.2", "Source": "Repository", "Repository": "CRAN", "Requirements": [ "R", "utils" ], - "Hash": "89e6d8219950eac806ae0c489052048a" + "Hash": "1216ac65ac55ec0058a6f75d7ca0fd52" }, "clipr": { "Package": "clipr", @@ -318,13 +320,13 @@ }, "cpp11": { "Package": "cpp11", - "Version": "0.4.6", + "Version": "0.4.7", "Source": "Repository", "Repository": "CRAN", "Requirements": [ "R" ], - "Hash": "707fae4bbf73697ec8d85f9d7076c061" + "Hash": "5a295d7d963cc5035284dcdbaf334f4e" }, "crayon": { "Package": "crayon", @@ -340,30 +342,30 @@ }, "curl": { "Package": "curl", - "Version": "5.1.0", + "Version": "5.2.1", "Source": "Repository", "Repository": "CRAN", "Requirements": [ "R" ], - "Hash": "9123f3ef96a2c1a93927d828b2fe7d4c" + "Hash": "411ca2c03b1ce5f548345d2fc2685f7a" }, "data.table": { "Package": "data.table", - "Version": "1.14.8", + "Version": "1.15.4", "Source": "Repository", - "Repository": "RSPM", + "Repository": "CRAN", "Requirements": [ "R", "methods" ], - "Hash": "b4c06e554f33344e044ccd7fdca750a9" + "Hash": "8ee9ac56ef633d0c7cab8b2ca87d683e" }, "dbplyr": { "Package": "dbplyr", - "Version": "2.3.4", + "Version": "2.5.0", "Source": "Repository", - "Repository": "RSPM", + "Repository": "CRAN", "Requirements": [ "DBI", "R", @@ -385,22 +387,22 @@ "vctrs", "withr" ], - "Hash": "63534894354af6b2587b7aa518a5193a" + "Hash": "39b2e002522bfd258039ee4e889e0fd1" }, "digest": { "Package": "digest", - "Version": "0.6.33", + "Version": "0.6.35", "Source": "Repository", "Repository": "CRAN", "Requirements": [ "R", "utils" ], - "Hash": "b18a9cf3c003977b0cc49d5e76ebe48d" + "Hash": "698ece7ba5a4fa4559e3d537e7ec3d31" }, "dplyr": { "Package": "dplyr", - "Version": "1.1.3", + "Version": "1.1.4", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -419,7 +421,7 @@ "utils", "vctrs" ], - "Hash": "e85ffbebaad5f70e1a2e2ef4302b4949" + "Hash": "fedd9d00c2944ff00a0e2696ccf048ec" }, "dtplyr": { "Package": "dtplyr", @@ -453,7 +455,7 @@ }, "emmeans": { "Package": "emmeans", - "Version": "1.8.9", + "Version": "1.10.1", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -466,32 +468,33 @@ "stats", "utils" ], - "Hash": "6b4662535108aae877533198d72a2318" + "Hash": "4445298c65c50bcb7d33b687e69bb0bd" }, "estimability": { "Package": "estimability", - "Version": "1.4.1", + "Version": "1.5", "Source": "Repository", "Repository": "CRAN", "Requirements": [ + "R", "stats" ], - "Hash": "1a78288c1188772070240b89ffe33579" + "Hash": "0d5f495f1edc281fca2510d8dabcba0f" }, "evaluate": { "Package": "evaluate", - "Version": "0.22", + "Version": "0.23", "Source": "Repository", "Repository": "CRAN", "Requirements": [ "R", "methods" ], - "Hash": "66f39c7a21e03c4dcb2c2d21d738d603" + "Hash": "daf4a1246be12c1fa8c7705a0935c1a0" }, "fansi": { "Package": "fansi", - "Version": "1.0.5", + "Version": "1.0.6", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -499,7 +502,7 @@ "grDevices", "utils" ], - "Hash": "3e8583a60163b4bc1a80016e63b9959e" + "Hash": "962174cf2aeb5b9eea581522286a911f" }, "farver": { "Package": "farver", @@ -589,7 +592,7 @@ }, "ggplot2": { "Package": "ggplot2", - "Version": "3.4.4", + "Version": "3.5.0", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -610,18 +613,18 @@ "vctrs", "withr" ], - "Hash": "313d31eff2274ecf4c1d3581db7241f9" + "Hash": "52ef83f93f74833007f193b2d4c159a2" }, "glue": { "Package": "glue", - "Version": "1.6.2", + "Version": "1.7.0", "Source": "Repository", "Repository": "CRAN", "Requirements": [ "R", "methods" ], - "Hash": "4f2596dfb05dac67b9dc558e5c6fba2e" + "Hash": "e0b3a53876554bd45879e596cdb10a52" }, "googledrive": { "Package": "googledrive", @@ -693,7 +696,7 @@ }, "haven": { "Package": "haven", - "Version": "2.5.3", + "Version": "2.5.4", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -710,7 +713,7 @@ "tidyselect", "vctrs" ], - "Hash": "9b302fe352f9cfc5dcf0a4139af3a565" + "Hash": "9171f898db9d9c4c1b2c745adc2c1ef1" }, "highr": { "Package": "highr", @@ -739,20 +742,19 @@ }, "htmltools": { "Package": "htmltools", - "Version": "0.5.6.1", + "Version": "0.5.8.1", "Source": "Repository", "Repository": "CRAN", "Requirements": [ "R", "base64enc", "digest", - "ellipsis", "fastmap", "grDevices", "rlang", "utils" ], - "Hash": "1e12fe667316a76508898839ecfb2d00" + "Hash": "81d371a9cc60640e74e4ab6ac46dcedc" }, "httr": { "Package": "httr", @@ -803,23 +805,22 @@ }, "jsonlite": { "Package": "jsonlite", - "Version": "1.8.7", + "Version": "1.8.8", "Source": "Repository", "Repository": "CRAN", "Requirements": [ "methods" ], - "Hash": "266a20443ca13c65688b2116d5220f76" + "Hash": "e1b9c55281c5adc4dd113652d9e26768" }, "kableExtra": { "Package": "kableExtra", - "Version": "1.3.4", + "Version": "1.4.0", "Source": "Repository", "Repository": "CRAN", "Requirements": [ "R", "digest", - "glue", "grDevices", "graphics", "htmltools", @@ -827,21 +828,19 @@ "magrittr", "rmarkdown", "rstudioapi", - "rvest", "scales", "stats", "stringr", "svglite", "tools", "viridisLite", - "webshot", "xml2" ], - "Hash": "49b625e6aabe4c5f091f5850aba8ff78" + "Hash": "532d16304274c23c8563f94b79351c86" }, "knitr": { "Package": "knitr", - "Version": "1.44", + "Version": "1.46", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -853,7 +852,7 @@ "xfun", "yaml" ], - "Hash": "60885b9f746c9dfaef110d070b5f7dc0" + "Hash": "6e008ab1d696a5283c79765fa7b56b47" }, "labeling": { "Package": "labeling", @@ -868,18 +867,18 @@ }, "later": { "Package": "later", - "Version": "1.3.1", + "Version": "1.3.2", "Source": "Repository", - "Repository": "RSPM", + "Repository": "CRAN", "Requirements": [ "Rcpp", "rlang" ], - "Hash": "40401c9cf2bc2259dfe83311c9384710" + "Hash": "a3e051d405326b8b0012377434c62b37" }, "lattice": { "Package": "lattice", - "Version": "0.21-9", + "Version": "0.22-6", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -890,11 +889,11 @@ "stats", "utils" ], - "Hash": "5558c61e0136e247252f5f952cdaad6a" + "Hash": "cc5ac1ba4c238c7ca9fa6a87ca11a7e2" }, "lifecycle": { "Package": "lifecycle", - "Version": "1.0.3", + "Version": "1.0.4", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -903,7 +902,7 @@ "glue", "rlang" ], - "Hash": "001cecbeac1cff9301bdc3775ee46a86" + "Hash": "b8552d117e1b808b09a832f589b79035" }, "lubridate": { "Package": "lubridate", @@ -920,15 +919,15 @@ }, "magick": { "Package": "magick", - "Version": "2.8.0", + "Version": "2.8.3", "Source": "Repository", - "Repository": "RSPM", + "Repository": "CRAN", "Requirements": [ "Rcpp", "curl", "magrittr" ], - "Hash": "88a1be45614781633df69ab666d66143" + "Hash": "3f6bcbb8a0c1c9365b2f02d5d04ad7bc" }, "magrittr": { "Package": "magrittr", @@ -953,7 +952,7 @@ }, "mgcv": { "Package": "mgcv", - "Version": "1.9-0", + "Version": "1.9-1", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -966,7 +965,7 @@ "stats", "utils" ], - "Hash": "086028ca0460d0c368028d3bda58f31b" + "Hash": "110ee9d83b496279960e162ac97764ce" }, "mime": { "Package": "mime", @@ -998,29 +997,29 @@ }, "munsell": { "Package": "munsell", - "Version": "0.5.0", + "Version": "0.5.1", "Source": "Repository", "Repository": "CRAN", "Requirements": [ "colorspace", "methods" ], - "Hash": "6dfe8bf774944bd5595785e3229d8771" + "Hash": "4fd8900853b746af55b81fda99da7695" }, "mvtnorm": { "Package": "mvtnorm", - "Version": "1.2-3", + "Version": "1.2-4", "Source": "Repository", "Repository": "CRAN", "Requirements": [ "R", "stats" ], - "Hash": "463b268710930f7bffef33147400966a" + "Hash": "17e96668f44a28aef0981d9e17c49b59" }, "nlme": { "Package": "nlme", - "Version": "3.1-163", + "Version": "3.1-164", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -1030,7 +1029,7 @@ "stats", "utils" ], - "Hash": "8d1938040a05566f4f7a14af4feadd6b" + "Hash": "a623a2239e642806158bc4dc3f51565d" }, "numDeriv": { "Package": "numDeriv", @@ -1044,7 +1043,7 @@ }, "officer": { "Package": "officer", - "Version": "0.6.2", + "Version": "0.6.5", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -1059,7 +1058,7 @@ "xml2", "zip" ], - "Hash": "d570077027cfedcf743d86838ffbd885" + "Hash": "3a71a529237487233ead151cba12be3f" }, "openssl": { "Package": "openssl", @@ -1071,18 +1070,6 @@ ], "Hash": "2a0dc8c6adfb6f032e4d4af82d258ab5" }, - "packrat": { - "Package": "packrat", - "Version": "0.9.2", - "Source": "Repository", - "Repository": "RSPM", - "Requirements": [ - "R", - "tools", - "utils" - ], - "Hash": "55ddd2d4a1959535f18393478b0c14a6" - }, "pdftools": { "Package": "pdftools", "Version": "3.4.0", @@ -1123,7 +1110,7 @@ }, "pkglite": { "Package": "pkglite", - "Version": "0.2.1", + "Version": "0.2.2", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -1132,7 +1119,7 @@ "magrittr", "remotes" ], - "Hash": "19b0295f3b0007bcdf72b2e97fdaeed1" + "Hash": "79afff1105346829b6e3d24a6a69c834" }, "prettyunits": { "Package": "prettyunits", @@ -1146,7 +1133,7 @@ }, "processx": { "Package": "processx", - "Version": "3.8.2", + "Version": "3.8.4", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -1155,31 +1142,32 @@ "ps", "utils" ], - "Hash": "3efbd8ac1be0296a46c55387aeace0f3" + "Hash": "0c90a7d71988856bad2a2a45dd871bb9" }, "progress": { "Package": "progress", - "Version": "1.2.2", + "Version": "1.2.3", "Source": "Repository", "Repository": "CRAN", "Requirements": [ + "R", "R6", "crayon", "hms", "prettyunits" ], - "Hash": "14dc9f7a3c91ebb14ec5bb9208a07061" + "Hash": "f4625e061cb2865f111b47ff163a5ca6" }, "ps": { "Package": "ps", - "Version": "1.7.5", + "Version": "1.7.6", "Source": "Repository", "Repository": "CRAN", "Requirements": [ "R", "utils" ], - "Hash": "709d852d33178db54b17c722e5b1e594" + "Hash": "dd2b9319ee0656c8acf45c7f40c59de7" }, "purrr": { "Package": "purrr", @@ -1198,36 +1186,39 @@ }, "qpdf": { "Package": "qpdf", - "Version": "1.3.2", + "Version": "1.3.3", "Source": "Repository", - "Repository": "RSPM", + "Repository": "CRAN", "Requirements": [ "Rcpp", "askpass", "curl" ], - "Hash": "e233fd211c74cb9297f4ab898ea2c18a" + "Hash": "479ebe6dca0a57c63d306e1b6a4bf30c" }, "quarto": { "Package": "quarto", - "Version": "1.3", + "Version": "1.4", "Source": "Repository", - "Repository": "RSPM", + "Repository": "CRAN", "Requirements": [ + "R", + "cli", "jsonlite", "later", "processx", + "rlang", "rmarkdown", - "rsconnect", "rstudioapi", + "tools", "utils", "yaml" ], - "Hash": "79e1cff980960b566ddc4ddb1a49a13d" + "Hash": "c94c271f9b998d116186a78b2a9b23c1" }, "r2rtf": { "Package": "r2rtf", - "Version": "1.1.0", + "Version": "1.1.1", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -1235,18 +1226,18 @@ "grDevices", "tools" ], - "Hash": "ffaeab7f5f86ccf52ab88bb925f89175" + "Hash": "807989b4dccfab6440841a5e8aaa95f1" }, "ragg": { "Package": "ragg", - "Version": "1.2.6", + "Version": "1.3.0", "Source": "Repository", "Repository": "CRAN", "Requirements": [ "systemfonts", "textshaping" ], - "Hash": "6ba2fa8740abdc2cc148407836509901" + "Hash": "082e1a198e3329d571f4448ef0ede4bc" }, "rappdirs": { "Package": "rappdirs", @@ -1260,7 +1251,7 @@ }, "readr": { "Package": "readr", - "Version": "2.1.4", + "Version": "2.1.5", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -1279,7 +1270,7 @@ "utils", "vroom" ], - "Hash": "b5047343b3825f37ad9d3b5d89aa1078" + "Hash": "9de96463d2117f6ac49980577939dfb3" }, "readxl": { "Package": "readxl", @@ -1315,7 +1306,7 @@ }, "remotes": { "Package": "remotes", - "Version": "2.4.2.1", + "Version": "2.5.0", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -1325,23 +1316,23 @@ "tools", "utils" ], - "Hash": "63d15047eb239f95160112bcadc4fcb9" + "Hash": "3ee025083e66f18db6cf27b56e23e141" }, "renv": { "Package": "renv", - "Version": "1.0.3", + "Version": "1.0.5", "Source": "Repository", "Repository": "CRAN", "Requirements": [ "utils" ], - "Hash": "41b847654f567341725473431dd0d5ab" + "Hash": "32c3f93e8360f667ca5863272ec8ba6a" }, "reprex": { "Package": "reprex", - "Version": "2.0.2", + "Version": "2.1.0", "Source": "Repository", - "Repository": "RSPM", + "Repository": "CRAN", "Requirements": [ "R", "callr", @@ -1357,22 +1348,22 @@ "utils", "withr" ], - "Hash": "d66fe009d4c20b7ab1927eb405db9ee2" + "Hash": "1425f91b4d5d9a8f25352c44a3d914ed" }, "rlang": { "Package": "rlang", - "Version": "1.1.1", + "Version": "1.1.3", "Source": "Repository", "Repository": "CRAN", "Requirements": [ "R", "utils" ], - "Hash": "a85c767b55f0bf9b7ad16c6d7baee5bb" + "Hash": "42548638fae05fd9a9b5f3f437fbbbe2" }, "rmarkdown": { "Package": "rmarkdown", - "Version": "2.25", + "Version": "2.26", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -1385,47 +1376,24 @@ "jsonlite", "knitr", "methods", - "stringr", "tinytex", "tools", "utils", "xfun", "yaml" ], - "Hash": "d65e35823c817f09f4de424fcdfa812a" - }, - "rsconnect": { - "Package": "rsconnect", - "Version": "1.1.1", - "Source": "Repository", - "Repository": "RSPM", - "Requirements": [ - "R", - "cli", - "curl", - "digest", - "jsonlite", - "lifecycle", - "openssl", - "packrat", - "renv", - "rlang", - "rstudioapi", - "tools", - "yaml" - ], - "Hash": "672fc66985074d17c86b6335105143b8" + "Hash": "9b148e7f95d33aac01f31282d49e4f44" }, "rstudioapi": { "Package": "rstudioapi", - "Version": "0.15.0", + "Version": "0.16.0", "Source": "Repository", "Repository": "CRAN", - "Hash": "5564500e25cffad9e22244ced1379887" + "Hash": "96710351d642b70e8f02ddeb237c46a7" }, "rvest": { "Package": "rvest", - "Version": "1.0.3", + "Version": "1.0.4", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -1438,14 +1406,13 @@ "rlang", "selectr", "tibble", - "withr", "xml2" ], - "Hash": "a4a5ac819a467808c60e36e92ddf195e" + "Hash": "0bcf0c6f274e90ea314b812a6d19a519" }, "sass": { "Package": "sass", - "Version": "0.4.7", + "Version": "0.4.9", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -1455,25 +1422,27 @@ "rappdirs", "rlang" ], - "Hash": "6bd4d33b50ff927191ec9acbf52fd056" + "Hash": "d53dbfddf695303ea4ad66f86e99b95d" }, "scales": { "Package": "scales", - "Version": "1.2.1", + "Version": "1.3.0", "Source": "Repository", "Repository": "CRAN", "Requirements": [ "R", "R6", "RColorBrewer", + "cli", "farver", + "glue", "labeling", "lifecycle", "munsell", "rlang", "viridisLite" ], - "Hash": "906cb23d2f1c5680b8ce439b44c6fa63" + "Hash": "c19df082ba346b0ffa6f833e92de34d1" }, "selectr": { "Package": "selectr", @@ -1490,7 +1459,7 @@ }, "stringi": { "Package": "stringi", - "Version": "1.7.12", + "Version": "1.8.3", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -1499,11 +1468,11 @@ "tools", "utils" ], - "Hash": "ca8bd84263c77310739d2cf64d84d7c9" + "Hash": "058aebddea264f4c99401515182e656a" }, "stringr": { "Package": "stringr", - "Version": "1.5.0", + "Version": "1.5.1", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -1516,11 +1485,11 @@ "stringi", "vctrs" ], - "Hash": "671a4d384ae9d32fc47a14e98bfa3dc8" + "Hash": "960e2ae9e09656611e0b8214ad543207" }, "survival": { "Package": "survival", - "Version": "3.5-7", + "Version": "3.5-8", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -1532,11 +1501,11 @@ "stats", "utils" ], - "Hash": "b8e943d262c3da0b0febd3e04517c197" + "Hash": "184d7799bca4ba8c3be72ea396f4b9a3" }, "svglite": { "Package": "svglite", - "Version": "2.1.2", + "Version": "2.1.3", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -1544,7 +1513,7 @@ "cpp11", "systemfonts" ], - "Hash": "be5318f6b48c136ecd6b8b5de24cc0ae" + "Hash": "124a41fdfa23e8691cb744c762f10516" }, "sys": { "Package": "sys", @@ -1555,14 +1524,14 @@ }, "systemfonts": { "Package": "systemfonts", - "Version": "1.0.5", + "Version": "1.0.6", "Source": "Repository", "Repository": "CRAN", "Requirements": [ "R", "cpp11" ], - "Hash": "15b594369e70b975ba9f064295983499" + "Hash": "6d538cff441f0f1f36db2209ac7495ac" }, "table1": { "Package": "table1", @@ -1612,7 +1581,7 @@ }, "tidyr": { "Package": "tidyr", - "Version": "1.3.0", + "Version": "1.3.1", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -1631,11 +1600,11 @@ "utils", "vctrs" ], - "Hash": "e47debdc7ce599b070c8e78e8ac0cfcf" + "Hash": "915fb7ce036c22a6a33b5a8adb712eb1" }, "tidyselect": { "Package": "tidyselect", - "Version": "1.2.0", + "Version": "1.2.1", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -1647,7 +1616,7 @@ "vctrs", "withr" ], - "Hash": "79540e5fcd9e0435af547d885f184fd5" + "Hash": "829f27b9c4919c16b593794a6344d6c0" }, "tidyverse": { "Package": "tidyverse", @@ -1691,24 +1660,24 @@ }, "timechange": { "Package": "timechange", - "Version": "0.2.0", + "Version": "0.3.0", "Source": "Repository", - "Repository": "RSPM", + "Repository": "CRAN", "Requirements": [ "R", "cpp11" ], - "Hash": "8548b44f79a35ba1791308b61e6012d7" + "Hash": "c5f3c201b931cd6474d17d8700ccb1c8" }, "tinytex": { "Package": "tinytex", - "Version": "0.48", + "Version": "0.50", "Source": "Repository", "Repository": "CRAN", "Requirements": [ "xfun" ], - "Hash": "8f96d229b7311beb32b94cf413b13f84" + "Hash": "be7a76845222ad20adb761f462eed3ea" }, "tzdb": { "Package": "tzdb", @@ -1737,27 +1706,27 @@ }, "utf8": { "Package": "utf8", - "Version": "1.2.3", + "Version": "1.2.4", "Source": "Repository", "Repository": "CRAN", "Requirements": [ "R" ], - "Hash": "1fe17157424bb09c48a8b3b550c753bc" + "Hash": "62b65c52671e6665f803ff02954446e9" }, "uuid": { "Package": "uuid", - "Version": "1.1-1", + "Version": "1.2-0", "Source": "Repository", "Repository": "CRAN", "Requirements": [ "R" ], - "Hash": "3d78edfb977a69fc7a0341bee25e163f" + "Hash": "303c19bfd970bece872f93a824e323d9" }, "vctrs": { "Package": "vctrs", - "Version": "0.6.4", + "Version": "0.6.5", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -1767,7 +1736,7 @@ "lifecycle", "rlang" ], - "Hash": "266c1ca411266ba8f365fcc726444b87" + "Hash": "c03fa420630029418f7e6da3667aac4a" }, "viridisLite": { "Package": "viridisLite", @@ -1781,7 +1750,7 @@ }, "vroom": { "Package": "vroom", - "Version": "1.6.4", + "Version": "1.6.5", "Source": "Repository", "Repository": "CRAN", "Requirements": [ @@ -1803,69 +1772,58 @@ "vctrs", "withr" ], - "Hash": "9db52c1656cf19c124f93124ea57f0fd" - }, - "webshot": { - "Package": "webshot", - "Version": "0.5.5", - "Source": "Repository", - "Repository": "CRAN", - "Requirements": [ - "R", - "callr", - "jsonlite", - "magrittr" - ], - "Hash": "16858ee1aba97f902d24049d4a44ef16" + "Hash": "390f9315bc0025be03012054103d227c" }, "withr": { "Package": "withr", - "Version": "2.5.1", + "Version": "3.0.0", "Source": "Repository", "Repository": "CRAN", "Requirements": [ "R", "grDevices", - "graphics", - "stats" + "graphics" ], - "Hash": "d77c6f74be05c33164e33fbc85540cae" + "Hash": "d31b6c62c10dcf11ec530ca6b0dd5d35" }, "xfun": { "Package": "xfun", - "Version": "0.40", + "Version": "0.43", "Source": "Repository", "Repository": "CRAN", "Requirements": [ + "grDevices", "stats", "tools" ], - "Hash": "be07d23211245fc7d4209f54c4e4ffc8" + "Hash": "ab6371d8653ce5f2f9290f4ec7b42a8e" }, "xml2": { "Package": "xml2", - "Version": "1.3.5", + "Version": "1.3.6", "Source": "Repository", "Repository": "CRAN", "Requirements": [ "R", - "methods" + "cli", + "methods", + "rlang" ], - "Hash": "6c40e5cfcc6aefd88110666e18c31f40" + "Hash": "1d0336142f4cd25d8d23cd3ba7a8fb61" }, "yaml": { "Package": "yaml", - "Version": "2.3.7", + "Version": "2.3.8", "Source": "Repository", "Repository": "CRAN", - "Hash": "0d0056cc5383fbc240ccd0cb584bf436" + "Hash": "29240487a071f535f5e5d5a323b7afbd" }, "zip": { "Package": "zip", - "Version": "2.3.0", + "Version": "2.3.1", "Source": "Repository", "Repository": "CRAN", - "Hash": "d98c94dacb7e0efcf83b0a133a705504" + "Hash": "fcc4bd8e6da2d2011eb64a5e5cc685ab" } } } From 23f4cb827448df694bab00466a0281595df69e34 Mon Sep 17 00:00:00 2001 From: Nan Xiao Date: Sun, 7 Apr 2024 15:39:18 -0400 Subject: [PATCH 2/2] Add downlit and xml2 because the `code-link` feature in Quarto requires them --- DESCRIPTION | 4 +++- renv.lock | 43 +++++++++++++++++++++++++++++++++++++++++++ 2 files changed, 46 insertions(+), 1 deletion(-) diff --git a/DESCRIPTION b/DESCRIPTION index b049a7e..479fb7d 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -11,6 +11,7 @@ Authors@R: c( URL: https://r4csr.org/, https://github.com/elong0527/r4csr Encoding: UTF-8 Imports: + downlit, emmeans, haven, kableExtra, @@ -20,4 +21,5 @@ Imports: quarto, r2rtf, table1, - tidyverse + tidyverse, + xml2 diff --git a/renv.lock b/renv.lock index e91d054..815f4aa 100644 --- a/renv.lock +++ b/renv.lock @@ -191,6 +191,16 @@ ], "Hash": "40415719b5a479b87949f3aa0aee737c" }, + "brio": { + "Package": "brio", + "Version": "1.1.4", + "Source": "Repository", + "Repository": "CRAN", + "Requirements": [ + "R" + ], + "Hash": "68bd2b066e1fe780bbf62fc8bcc36de3" + }, "broom": { "Package": "broom", "Version": "1.0.5", @@ -389,6 +399,19 @@ ], "Hash": "39b2e002522bfd258039ee4e889e0fd1" }, + "desc": { + "Package": "desc", + "Version": "1.4.3", + "Source": "Repository", + "Repository": "CRAN", + "Requirements": [ + "R", + "R6", + "cli", + "utils" + ], + "Hash": "99b79fcbd6c4d1ce087f5c5c758b384f" + }, "digest": { "Package": "digest", "Version": "0.6.35", @@ -400,6 +423,26 @@ ], "Hash": "698ece7ba5a4fa4559e3d537e7ec3d31" }, + "downlit": { + "Package": "downlit", + "Version": "0.4.3", + "Source": "Repository", + "Repository": "CRAN", + "Requirements": [ + "R", + "brio", + "desc", + "digest", + "evaluate", + "fansi", + "memoise", + "rlang", + "vctrs", + "withr", + "yaml" + ], + "Hash": "14fa1f248b60ed67e1f5418391a17b14" + }, "dplyr": { "Package": "dplyr", "Version": "1.1.4",