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Merge branch 'CW-2969' into 'dev'
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CW-2969 - sed tmp writing

Closes CW-2969

See merge request epi2melabs/workflows/wf-artic!154
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mattdmem committed Oct 26, 2023
2 parents 168191d + 33fcb63 commit 443c9f0
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3 changes: 2 additions & 1 deletion CHANGELOG.md
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Expand Up @@ -4,9 +4,10 @@ All notable changes to this project will be documented in this file.
The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.1.0/),
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).

## [unreleased]
## [v0.3.32]
### Fixed
- reporting of sequence summaries crashing with `TypeError`
- sed error when writing to tmp

## [v0.3.31]
### Changed
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6 changes: 3 additions & 3 deletions nextflow.config
Original file line number Diff line number Diff line change
Expand Up @@ -58,8 +58,8 @@ params {
"--scheme_name 'SARS-CoV-2'",
"--scheme_version 'Midnight-ONT/V3'"
]
common_sha = "sha91452ece4f647f62b32dac3a614635a6f0d7f8b5"
container_sha = 'shaa5485f2d1c9085c23b266273556a4ce01e5e0dd9'
common_sha = 'sha91452ece4f647f62b32dac3a614635a6f0d7f8b5'
container_sha = 'sha6e8c02f120faf92b4e61e1d0797d71210aaec20b'
nextclade_sha = 'shae56aff3b5b498b8cb950993692f914033397f8da'
pangolin_sha = 'shae304dd3bc308a519f26908eb9d5ffa7686131d17'
}
Expand All @@ -72,7 +72,7 @@ manifest {
description = 'Run the ARTIC SARS-CoV-2 methodology on multiplexed MinION, GridION, and PromethION data.'
mainScript = 'main.nf'
nextflowVersion = '>=23.04.2'
version = 'v0.3.31'
version = 'v0.3.32'
}

epi2melabs {
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