From ce78ddcc7c99b49795727ec307725ff0c9d1f792 Mon Sep 17 00:00:00 2001 From: seabbs <20317649+seabbs@users.noreply.github.com> Date: Mon, 2 Sep 2024 23:36:31 +0000 Subject: [PATCH] Update CITATION.cff --- CITATION.cff | 198 +++++++++++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 198 insertions(+) create mode 100644 CITATION.cff diff --git a/CITATION.cff b/CITATION.cff new file mode 100644 index 0000000..7130f71 --- /dev/null +++ b/CITATION.cff @@ -0,0 +1,198 @@ +# -------------------------------------------- +# CITATION file created with {cffr} R package +# See also: https://docs.ropensci.org/cffr/ +# -------------------------------------------- + +cff-version: 1.2.0 +message: 'To cite package "primarycensoreddist" in publications use:' +type: software +license: MIT +title: 'primarycensoreddist: Primary Event Censored Distributions in R and Stan' +version: 0.1.0.1000 +doi: 10.5281/zenodo.13632839 +identifiers: +- type: url + value: https://github.com/epinowcast/primarycensoreddist/ +abstract: This package provides both R functions for working with primary event censored + distributions and Stan implementations for use in Bayesian modeling. Primary event + censored distributions are useful for modeling delayed reporting scenarios in epidemiology + and other fields. It provides support for arbitrary delay distributions, a range + of common primary distributions, and allows for truncation and secondary event censoring + to be accounted for. +authors: +- name: Sam Abbott + email: contact@samabbott.co.uk + orcid: https://orcid.org/0000-0001-8057-8037 +preferred-citation: + type: manual + title: 'primarycensoreddist: Primary Event Censored Distributions in R and Stan' + authors: + - name: Sam Abbott + email: contact@samabbott.co.uk + orcid: https://orcid.org/0000-0001-8057-8037 + year: '2024' + doi: 10.5281/zenodo.13632839 +repository-code: https://github.com/epinowcast/primarycensoreddist/issues/ +url: https://primarycensoreddist.epinowcast.org +contact: +- name: Sam Abbott + email: contact@samabbott.co.uk + orcid: https://orcid.org/0000-0001-8057-8037 +references: +- type: software + title: 'R: A Language and Environment for Statistical Computing' + notes: Depends + url: https://www.R-project.org/ + authors: + - name: R Core Team + institution: + name: R Foundation for Statistical Computing + address: Vienna, Austria + year: '2024' + version: '>= 4.0.0' +- type: software + title: bookdown + abstract: 'bookdown: Authoring Books and Technical Documents with R Markdown' + notes: Suggests + url: https://pkgs.rstudio.com/bookdown/ + repository: https://CRAN.R-project.org/package=bookdown + authors: + - family-names: Xie + given-names: Yihui + email: xie@yihui.name + orcid: https://orcid.org/0000-0003-0645-5666 + year: '2024' + doi: 10.32614/CRAN.package.bookdown +- type: software + title: cmdstanr + abstract: 'cmdstanr: R Interface to ''CmdStan''' + notes: Suggests + url: https://mc-stan.org/cmdstanr/ + repository: https://stan-dev.r-universe.dev + authors: + - family-names: Gabry + given-names: Jonah + email: jsg2201@columbia.edu + - family-names: Češnovar + given-names: Rok + email: rok.cesnovar@fri.uni-lj.si + - family-names: Johnson + given-names: Andrew + email: andrew.johnson@arjohnsonau.com + orcid: https://orcid.org/0000-0001-7000-8065 + - family-names: Bronder + given-names: Steve + year: '2024' + doi: 10.32614/CRAN.package.cmdstanr +- type: software + title: knitr + abstract: 'knitr: A General-Purpose Package for Dynamic Report Generation in R' + notes: Suggests + url: https://yihui.org/knitr/ + repository: https://CRAN.R-project.org/package=knitr + authors: + - family-names: Xie + given-names: Yihui + email: xie@yihui.name + orcid: https://orcid.org/0000-0003-0645-5666 + year: '2024' + doi: 10.32614/CRAN.package.knitr +- type: software + title: rmarkdown + abstract: 'rmarkdown: Dynamic Documents for R' + notes: Suggests + url: https://pkgs.rstudio.com/rmarkdown/ + repository: https://CRAN.R-project.org/package=rmarkdown + authors: + - family-names: Allaire + given-names: JJ + email: jj@posit.co + - family-names: Xie + given-names: Yihui + email: xie@yihui.name + orcid: https://orcid.org/0000-0003-0645-5666 + - family-names: Dervieux + given-names: Christophe + email: cderv@posit.co + orcid: https://orcid.org/0000-0003-4474-2498 + - family-names: McPherson + given-names: Jonathan + email: jonathan@posit.co + - family-names: Luraschi + given-names: Javier + - family-names: Ushey + given-names: Kevin + email: kevin@posit.co + - family-names: Atkins + given-names: Aron + email: aron@posit.co + - family-names: Wickham + given-names: Hadley + email: hadley@posit.co + - family-names: Cheng + given-names: Joe + email: joe@posit.co + - family-names: Chang + given-names: Winston + email: winston@posit.co + - family-names: Iannone + given-names: Richard + email: rich@posit.co + orcid: https://orcid.org/0000-0003-3925-190X + year: '2024' + doi: 10.32614/CRAN.package.rmarkdown +- type: software + title: spelling + abstract: 'spelling: Tools for Spell Checking in R' + notes: Suggests + url: https://ropensci.r-universe.dev/spelling + repository: https://CRAN.R-project.org/package=spelling + authors: + - family-names: Ooms + given-names: Jeroen + email: jeroen@berkeley.edu + orcid: https://orcid.org/0000-0002-4035-0289 + - family-names: Hester + given-names: Jim + email: james.hester@rstudio.com + year: '2024' + doi: 10.32614/CRAN.package.spelling +- type: software + title: testthat + abstract: 'testthat: Unit Testing for R' + notes: Suggests + url: https://testthat.r-lib.org + repository: https://CRAN.R-project.org/package=testthat + authors: + - family-names: Wickham + given-names: Hadley + email: hadley@posit.co + year: '2024' + doi: 10.32614/CRAN.package.testthat + version: '>= 3.1.9' +- type: software + title: usethis + abstract: 'usethis: Automate Package and Project Setup' + notes: Suggests + url: https://usethis.r-lib.org + repository: https://CRAN.R-project.org/package=usethis + authors: + - family-names: Wickham + given-names: Hadley + email: hadley@posit.co + orcid: https://orcid.org/0000-0003-4757-117X + - family-names: Bryan + given-names: Jennifer + email: jenny@posit.co + orcid: https://orcid.org/0000-0002-6983-2759 + - family-names: Barrett + given-names: Malcolm + email: malcolmbarrett@gmail.com + orcid: https://orcid.org/0000-0003-0299-5825 + - family-names: Teucher + given-names: Andy + email: andy.teucher@posit.co + orcid: https://orcid.org/0000-0002-7840-692X + year: '2024' + doi: 10.32614/CRAN.package.usethis +