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CITATION.cff
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# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# --------------------------------------------
cff-version: 1.2.0
message: 'To cite package "sivirep" in publications use:'
type: software
license: MIT
title: 'sivirep: Data Wrangling and Automated Reports from ''SIVIGILA'' source'
version: 1.0.0
abstract: Provides functions for data wrangling and automated reports from 'SIVIGILA'
source.
authors:
- family-names: Gómez-Millán
given-names: Geraldine
email: geralidine.gomez@javeriana.edu.co
orcid: https://orcid.org/0009-0007-8701-0568
- family-names: Cucunubá
given-names: Zulma M.
email: zulma.cucunuba@javeriana.edu.co
orcid: https://orcid.org/0000-0002-8165-3198
- family-names: Mendez-Romero
given-names: Jennifer A.
email: jenniferk2@hotmail.com
orcid: https://orcid.org/0009-0001-6138-0225
- family-names: Huguett-Aragón
given-names: Claudia
email: chuguett@hotmail.com
orcid: https://orcid.org/0000-0002-9814-2386
repository-code: https://github.com/epiverse-trace/sivirep
url: https://epiverse-trace.github.io/sivirep/
contact:
- family-names: Cucunubá
given-names: Zulma M.
email: zulma.cucunuba@javeriana.edu.co
orcid: https://orcid.org/0000-0002-8165-3198
keywords:
- colombia
- epidemiological-surveillance
- epiverse
- public-health
- r
- r-package
references:
- type: software
title: config
abstract: 'config: Manage Environment Specific Configuration Values'
notes: Imports
url: https://rstudio.github.io/config/
repository: https://CRAN.R-project.org/package=config
authors:
- family-names: Allaire
given-names: JJ
email: jj@rstudio.com
year: '2024'
- type: software
title: dplyr
abstract: 'dplyr: A Grammar of Data Manipulation'
notes: Imports
url: https://dplyr.tidyverse.org
repository: https://CRAN.R-project.org/package=dplyr
authors:
- family-names: Wickham
given-names: Hadley
email: hadley@posit.co
orcid: https://orcid.org/0000-0003-4757-117X
- family-names: François
given-names: Romain
orcid: https://orcid.org/0000-0002-2444-4226
- family-names: Henry
given-names: Lionel
- family-names: Müller
given-names: Kirill
orcid: https://orcid.org/0000-0002-1416-3412
- family-names: Vaughan
given-names: Davis
email: davis@posit.co
orcid: https://orcid.org/0000-0003-4777-038X
year: '2024'
- type: software
title: ggplot2
abstract: 'ggplot2: Create Elegant Data Visualisations Using the Grammar of Graphics'
notes: Imports
url: https://ggplot2.tidyverse.org
repository: https://CRAN.R-project.org/package=ggplot2
authors:
- family-names: Wickham
given-names: Hadley
email: hadley@posit.co
orcid: https://orcid.org/0000-0003-4757-117X
- family-names: Chang
given-names: Winston
orcid: https://orcid.org/0000-0002-1576-2126
- family-names: Henry
given-names: Lionel
- family-names: Pedersen
given-names: Thomas Lin
email: thomas.pedersen@posit.co
orcid: https://orcid.org/0000-0002-5147-4711
- family-names: Takahashi
given-names: Kohske
- family-names: Wilke
given-names: Claus
orcid: https://orcid.org/0000-0002-7470-9261
- family-names: Woo
given-names: Kara
orcid: https://orcid.org/0000-0002-5125-4188
- family-names: Yutani
given-names: Hiroaki
orcid: https://orcid.org/0000-0002-3385-7233
- family-names: Dunnington
given-names: Dewey
orcid: https://orcid.org/0000-0002-9415-4582
- family-names: Brand
given-names: Teun
name-particle: van den
orcid: https://orcid.org/0000-0002-9335-7468
year: '2024'
- type: software
title: httr2
abstract: 'httr2: Perform HTTP Requests and Process the Responses'
notes: Imports
url: https://httr2.r-lib.org
repository: https://CRAN.R-project.org/package=httr2
authors:
- family-names: Wickham
given-names: Hadley
email: hadley@rstudio.com
year: '2024'
- type: software
title: stringr
abstract: 'stringr: Simple, Consistent Wrappers for Common String Operations'
notes: Imports
url: https://stringr.tidyverse.org
repository: https://CRAN.R-project.org/package=stringr
authors:
- family-names: Wickham
given-names: Hadley
email: hadley@posit.co
year: '2024'
- type: software
title: xml2
abstract: 'xml2: Parse XML'
notes: Imports
url: https://xml2.r-lib.org/
repository: https://CRAN.R-project.org/package=xml2
authors:
- family-names: Wickham
given-names: Hadley
email: hadley@posit.co
- family-names: Hester
given-names: Jim
- family-names: Ooms
given-names: Jeroen
year: '2024'
- type: software
title: epitrix
abstract: 'epitrix: Small Helpers and Tricks for Epidemics Analysis'
notes: Imports
url: http://www.repidemicsconsortium.org/epitrix/
repository: https://CRAN.R-project.org/package=epitrix
authors:
- family-names: Jombart
given-names: Thibaut
email: thibautjombart@gmail.com
- family-names: Cori
given-names: Anne
email: a.cori@imperial.ac.uk
- family-names: Finger
given-names: Flavio
email: flavio.finger@lshtm.ac.uk
year: '2024'
- type: software
title: sf
abstract: 'sf: Simple Features for R'
notes: Imports
url: https://r-spatial.github.io/sf/
repository: https://CRAN.R-project.org/package=sf
authors:
- family-names: Pebesma
given-names: Edzer
email: edzer.pebesma@uni-muenster.de
orcid: https://orcid.org/0000-0001-8049-7069
year: '2024'
- type: software
title: readxl
abstract: 'readxl: Read Excel Files'
notes: Imports
url: https://readxl.tidyverse.org
repository: https://CRAN.R-project.org/package=readxl
authors:
- family-names: Wickham
given-names: Hadley
email: hadley@posit.co
orcid: https://orcid.org/0000-0003-4757-117X
- family-names: Bryan
given-names: Jennifer
email: jenny@posit.co
orcid: https://orcid.org/0000-0002-6983-2759
year: '2024'
- type: software
title: sysfonts
abstract: 'sysfonts: Loading Fonts into R'
notes: Imports
url: https://github.com/yixuan/sysfonts
repository: https://CRAN.R-project.org/package=sysfonts
authors:
- family-names: Qiu
given-names: Yixuan
- family-names: details.
given-names: authors/contributors of the included fonts. See file AUTHORS for
year: '2024'
- type: software
title: showtext
abstract: 'showtext: Using Fonts More Easily in R Graphs'
notes: Imports
url: https://github.com/yixuan/showtext
repository: https://CRAN.R-project.org/package=showtext
authors:
- family-names: Qiu
given-names: Yixuan
- family-names: details.
given-names: authors/contributors of the included software. See file AUTHORS for
year: '2024'
- type: software
title: kableExtra
abstract: 'kableExtra: Construct Complex Table with ''kable'' and Pipe Syntax'
notes: Imports
url: http://haozhu233.github.io/kableExtra/
repository: https://CRAN.R-project.org/package=kableExtra
authors:
- family-names: Zhu
given-names: Hao
email: haozhu233@gmail.com
orcid: https://orcid.org/0000-0002-3386-6076
year: '2024'
- type: software
title: knitr
abstract: 'knitr: A General-Purpose Package for Dynamic Report Generation in R'
notes: Suggests
url: https://yihui.org/knitr/
repository: https://CRAN.R-project.org/package=knitr
authors:
- family-names: Xie
given-names: Yihui
email: xie@yihui.name
orcid: https://orcid.org/0000-0003-0645-5666
year: '2024'
- type: software
title: rmarkdown
abstract: 'rmarkdown: Dynamic Documents for R'
notes: Suggests
url: https://pkgs.rstudio.com/rmarkdown/
repository: https://CRAN.R-project.org/package=rmarkdown
authors:
- family-names: Allaire
given-names: JJ
email: jj@posit.co
- family-names: Xie
given-names: Yihui
email: xie@yihui.name
orcid: https://orcid.org/0000-0003-0645-5666
- family-names: Dervieux
given-names: Christophe
email: cderv@posit.co
orcid: https://orcid.org/0000-0003-4474-2498
- family-names: McPherson
given-names: Jonathan
email: jonathan@posit.co
- family-names: Luraschi
given-names: Javier
- family-names: Ushey
given-names: Kevin
email: kevin@posit.co
- family-names: Atkins
given-names: Aron
email: aron@posit.co
- family-names: Wickham
given-names: Hadley
email: hadley@posit.co
- family-names: Cheng
given-names: Joe
email: joe@posit.co
- family-names: Chang
given-names: Winston
email: winston@posit.co
- family-names: Iannone
given-names: Richard
email: rich@posit.co
orcid: https://orcid.org/0000-0003-3925-190X
year: '2024'
- type: software
title: testthat
abstract: 'testthat: Unit Testing for R'
notes: Suggests
url: https://testthat.r-lib.org
repository: https://CRAN.R-project.org/package=testthat
authors:
- family-names: Wickham
given-names: Hadley
email: hadley@posit.co
year: '2024'
version: '>= 3.0.0'
- type: software
title: 'R: A Language and Environment for Statistical Computing'
notes: Depends
url: https://www.R-project.org/
authors:
- name: R Core Team
institution:
name: R Foundation for Statistical Computing
address: Vienna, Austria
year: '2024'
version: '>= 3.5.0'