This pipeline conducts a test GWAS on the MoBa genotypes.
- docs: Documentation produced by the pipeline on the different releases
- envs: Files used to manage conda environments
- utils: Utilities scripts
- analysis.yaml: Parameters for the analysis
- gwas.snake: Main pipeline file
- prepare_phenotypes_file.R: Script used to prepare the phenotypes for regenie
- association_qc_no_cojo.R: Script used to write the documentation on the association results